BLASTX nr result

ID: Coptis25_contig00024588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024588
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_003578364.1| PREDICTED: uncharacterized protein LOC100835...    68   7e-10
emb|CBI26021.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|NP_001043315.1| Os01g0553400 [Oryza sativa Japonica Group] g...    67   2e-09
dbj|BAD87920.1| unknown protein [Oryza sativa Japonica Group] gi...    67   2e-09

>ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|222868171|gb|EEF05302.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/126 (46%), Positives = 75/126 (59%)
 Frame = -3

Query: 402 KVRYCLGIESSNHIDRWVSFAVRKQTEELYLNFSFVPQSCELYSFPCHLLPQGKASQLKH 223
           KVR+ LG + + H+DRWVSF+   Q E++  +FS  P+SC  Y+FPCH+LP  KAS LKH
Sbjct: 83  KVRFGLGDDHAFHVDRWVSFSSAMQVEKIAFDFSCSPKSCGSYNFPCHILPADKASHLKH 142

Query: 222 LSLKSCMMKPSPDFANCFNSLTKLQLNNVPLDQSDFCDILLGCVNLEFFKLKNCSLPATF 43
           L L SC ++ SP F +  N L  L L+ VPLDQS    I   C  L   ++  C LP   
Sbjct: 143 LCLVSCTLRLSPKFTSQLNPLRTLDLDGVPLDQSGLDIITSACPKLTLLRMIGCGLPKIV 202

Query: 42  FIAGHL 25
            I G L
Sbjct: 203 CIHGQL 208


>ref|XP_003578364.1| PREDICTED: uncharacterized protein LOC100835160 [Brachypodium
           distachyon]
          Length = 547

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/101 (36%), Positives = 54/101 (53%)
 Frame = -3

Query: 363 IDRWVSFAVRKQTEELYLNFSFVPQSCELYSFPCHLLPQGKASQLKHLSLKSCMMKPSPD 184
           +DRW+  AVR   E+L L    +  +  +Y+FPC LL  G    L+HL L SC  +P+  
Sbjct: 156 LDRWLHIAVRPGIEKLDLWLRPILSAVSVYNFPCSLLLNGSGKSLRHLHLSSCTFRPTAG 215

Query: 183 FANCFNSLTKLQLNNVPLDQSDFCDILLGCVNLEFFKLKNC 61
             +C  SLT L+L  V + + D   +L   V LE  +L +C
Sbjct: 216 L-DCLRSLTSLELYEVRVTEDDLRCLLSSLVALEELRLVDC 255


>emb|CBI26021.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 14/149 (9%)
 Frame = -3

Query: 405 FKVRYCLGIESSNHIDRWVSFAVRKQTEELYLN----FSF-------VPQSCELYSFPCH 259
           F + + LG E  +HID+W++ AV K  E + L+    FSF          + ++Y FPC 
Sbjct: 111 FSIHFPLGKEFMSHIDQWITCAVMKGVENIDLDLSEYFSFNLKRDDTSSTAFQIYEFPCR 170

Query: 258 L--LPQGKASQLKHLSLKSCMMKPSPDFANCFNSLTKLQLNNVPLDQSDFCDILLGCVNL 85
           L  +P G+ + LKHL L SC +   P  +N   SL  + L  V +      D+L  C +L
Sbjct: 171 LFSVPGGRCT-LKHLRLASCHLSALPS-SNTLTSLITVDLQRVNISDQQLQDLLSTCSHL 228

Query: 84  EFFKLKNCS-LPATFFIAGHLRLRELFLK 1
           E+  L  C+ L    F A +L+L+ L +K
Sbjct: 229 EWLSLCVCNGLVNLSFSALNLQLKFLSIK 257


>ref|NP_001043315.1| Os01g0553400 [Oryza sativa Japonica Group]
           gi|113532846|dbj|BAF05229.1| Os01g0553400 [Oryza sativa
           Japonica Group]
          Length = 479

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = -3

Query: 405 FKVRYCLGIESSNHIDRWVSFAVRKQTEELYLNFS-FVPQSCELYSFPCHLLPQGKASQL 229
           F V++ L  E +  ID WVSFA+  +   L LNFS ++      YSFPCHL      S  
Sbjct: 124 FGVKFELWKEHARDIDGWVSFAIASKARVLVLNFSPYIGLRENSYSFPCHLFNDRNGSHF 183

Query: 228 KHLSLKSCMMKPSPDFANCFNSLTKLQLNNVPLDQSDFCDILLGCVNLEFFKLKNCS 58
           K L L +    P+PDF   F +LT L L +V L   +F   L  C  LE+ ++  CS
Sbjct: 184 KVLQLDTVTFGPTPDFCG-FANLTMLTLKHV-LVLDNFQYFLPKCPALEWLEILMCS 238


>dbj|BAD87920.1| unknown protein [Oryza sativa Japonica Group]
           gi|57900493|dbj|BAD87982.1| unknown protein [Oryza
           sativa Japonica Group] gi|222618661|gb|EEE54793.1|
           hypothetical protein OsJ_02196 [Oryza sativa Japonica
           Group]
          Length = 472

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = -3

Query: 405 FKVRYCLGIESSNHIDRWVSFAVRKQTEELYLNFS-FVPQSCELYSFPCHLLPQGKASQL 229
           F V++ L  E +  ID WVSFA+  +   L LNFS ++      YSFPCHL      S  
Sbjct: 117 FGVKFELWKEHARDIDGWVSFAIASKARVLVLNFSPYIGLRENSYSFPCHLFNDRNGSHF 176

Query: 228 KHLSLKSCMMKPSPDFANCFNSLTKLQLNNVPLDQSDFCDILLGCVNLEFFKLKNCS 58
           K L L +    P+PDF   F +LT L L +V L   +F   L  C  LE+ ++  CS
Sbjct: 177 KVLQLDTVTFGPTPDFCG-FANLTMLTLKHV-LVLDNFQYFLPKCPALEWLEILMCS 231


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