BLASTX nr result

ID: Coptis25_contig00024580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024580
         (1042 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167173.1| PREDICTED: uncharacterized protein LOC101229...   114   4e-23
ref|XP_004147495.1| PREDICTED: uncharacterized protein LOC101212...   114   4e-23
emb|CBI23125.3| unnamed protein product [Vitis vinifera]              109   1e-21
ref|XP_002269434.1| PREDICTED: uncharacterized protein At2g29880...   109   1e-21
ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD...    83   1e-13

>ref|XP_004167173.1| PREDICTED: uncharacterized protein LOC101229172 [Cucumis sativus]
          Length = 327

 Score =  114 bits (285), Expect = 4e-23
 Identities = 81/255 (31%), Positives = 129/255 (50%), Gaps = 20/255 (7%)
 Frame = -1

Query: 1039 LRKKYYLRFGLKYLPKAYKNKHQNMKERFREFKALVEKTSGTGFNQVLGTFIASDSWWDD 860
            ++++ Y++ G  Y  +  KNK+ +++ R++EFK L+   +G G++ VLGT    ++ W +
Sbjct: 81   IKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTN 140

Query: 859  YIKTHKKAKHLKRLRVRGCPEYKDLQIIFGDTIATGSNRASVSYNFDSTDEENGEKEATA 680
             IK +KKAK  K+    GCP Y  L  I+GDTIAT    A  S    S  E + + E  +
Sbjct: 141  LIKVNKKAKKFKK---SGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTE--S 195

Query: 679  ESPMPPQVQNSEGGNNRENNDYGTQSTQNKSQSHSRKRERSDPKGSELTEAVKMLAEASQ 500
            +SPM     N + GN+R+ N    Q   + S+   RKRE  +   S   EA     +   
Sbjct: 196  DSPM----SNEDCGNSRDEN----QGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRN 247

Query: 499  ARVEKR------GKFS-------------ITECVDIIEAMGIEIGRKTYVKAI-SLFQDK 380
              +E R      G+FS             + +C+ I+ +M ++I  K Y K +  L  D 
Sbjct: 248  DILEGRLVGFPSGEFSEISSKERDYADEDLNKCIKILNSM-VDIDDKAYTKVLKQLVADT 306

Query: 379  GWREAFLHMSDARRR 335
             WR+AFL + ++RRR
Sbjct: 307  TWRKAFLCIPESRRR 321


>ref|XP_004147495.1| PREDICTED: uncharacterized protein LOC101212009 [Cucumis sativus]
          Length = 327

 Score =  114 bits (285), Expect = 4e-23
 Identities = 81/255 (31%), Positives = 129/255 (50%), Gaps = 20/255 (7%)
 Frame = -1

Query: 1039 LRKKYYLRFGLKYLPKAYKNKHQNMKERFREFKALVEKTSGTGFNQVLGTFIASDSWWDD 860
            ++++ Y++ G  Y  +  KNK+ +++ R++EFK L+   +G G++ VLGT    ++ W +
Sbjct: 81   IKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTN 140

Query: 859  YIKTHKKAKHLKRLRVRGCPEYKDLQIIFGDTIATGSNRASVSYNFDSTDEENGEKEATA 680
             IK +KKAK  K+    GCP Y  L  I+GDTIAT    A  S    S  E + + E  +
Sbjct: 141  LIKVNKKAKKFKK---SGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTE--S 195

Query: 679  ESPMPPQVQNSEGGNNRENNDYGTQSTQNKSQSHSRKRERSDPKGSELTEAVKMLAEASQ 500
            +SPM     N + GN+R+ N    Q   + S+   RKRE  +   S   EA     +   
Sbjct: 196  DSPM----SNEDCGNSRDEN----QGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRN 247

Query: 499  ARVEKR------GKFS-------------ITECVDIIEAMGIEIGRKTYVKAI-SLFQDK 380
              +E R      G+FS             + +C+ I+ +M ++I  K Y K +  L  D 
Sbjct: 248  DILEGRLFGFPSGEFSEISSKERDYADEDLNKCIKILNSM-VDIDDKAYTKVLKQLVADT 306

Query: 379  GWREAFLHMSDARRR 335
             WR+AFL + ++RRR
Sbjct: 307  TWRKAFLCIPESRRR 321


>emb|CBI23125.3| unnamed protein product [Vitis vinifera]
          Length = 266

 Score =  109 bits (272), Expect = 1e-21
 Identities = 82/251 (32%), Positives = 125/251 (49%), Gaps = 20/251 (7%)
 Frame = -1

Query: 1006 KYLPKAYKNKHQNMKERFREFKALVEKTSGTGFNQVLGTFIASDSWWDDYIKTHKKAKHL 827
            +Y    ++NK   ++ R+ +F  L+ + SG  ++ VL T IA+++ WD YIK +K AK  
Sbjct: 34   RYNNSQFRNKFNQLRTRYHDFSRLLRE-SGFSWDPVLNTIIANEAVWDSYIKVNKSAK-- 90

Query: 826  KRLRVRGCPEYKDLQIIFGDTIATGSNRASVSYNFDSTDEENGEKEATAESPMPPQVQNS 647
             R R +GCP + +L IIFGD            Y   S +EE  E E  + +  P    + 
Sbjct: 91   -RFRKKGCPMFNELGIIFGDPAQCKVVFPLAQY--PSGNEEKLELEDASTNATPSAFPS- 146

Query: 646  EGGNNRENNDYGTQSTQNKSQSHSRKRERSDPKGS-----------ELTEAVKMLAEASQ 500
               ++ +  DY + S++       R+RERS    S           E+ EA+K  AEAS+
Sbjct: 147  ---DSSDEKDYSSPSSR-------RRRERSPTPTSHIQGKREFRTLEMGEALKEWAEASK 196

Query: 499  ARVEKRGKF---------SITECVDIIEAMGIEIGRKTYVKAISLFQDKGWREAFLHMSD 347
            A+     +F         SIT CV  +E++   +   TY+KAI +F+D  WRE F+ MS 
Sbjct: 197  AKTPTLSRFEESSQCNAFSITNCVRCLESIE-GVDGSTYIKAIKMFKDVDWREMFMAMSA 255

Query: 346  ARRRDVLLSIE 314
             RR   L S+E
Sbjct: 256  ERRLVWLASLE 266


>ref|XP_002269434.1| PREDICTED: uncharacterized protein At2g29880-like [Vitis vinifera]
          Length = 297

 Score =  109 bits (272), Expect = 1e-21
 Identities = 82/251 (32%), Positives = 125/251 (49%), Gaps = 20/251 (7%)
 Frame = -1

Query: 1006 KYLPKAYKNKHQNMKERFREFKALVEKTSGTGFNQVLGTFIASDSWWDDYIKTHKKAKHL 827
            +Y    ++NK   ++ R+ +F  L+ + SG  ++ VL T IA+++ WD YIK +K AK  
Sbjct: 65   RYNNSQFRNKFNQLRTRYHDFSRLLRE-SGFSWDPVLNTIIANEAVWDSYIKVNKSAK-- 121

Query: 826  KRLRVRGCPEYKDLQIIFGDTIATGSNRASVSYNFDSTDEENGEKEATAESPMPPQVQNS 647
             R R +GCP + +L IIFGD            Y   S +EE  E E  + +  P    + 
Sbjct: 122  -RFRKKGCPMFNELGIIFGDPAQCKVVFPLAQY--PSGNEEKLELEDASTNATPSAFPS- 177

Query: 646  EGGNNRENNDYGTQSTQNKSQSHSRKRERSDPKGS-----------ELTEAVKMLAEASQ 500
               ++ +  DY + S++       R+RERS    S           E+ EA+K  AEAS+
Sbjct: 178  ---DSSDEKDYSSPSSR-------RRRERSPTPTSHIQGKREFRTLEMGEALKEWAEASK 227

Query: 499  ARVEKRGKF---------SITECVDIIEAMGIEIGRKTYVKAISLFQDKGWREAFLHMSD 347
            A+     +F         SIT CV  +E++   +   TY+KAI +F+D  WRE F+ MS 
Sbjct: 228  AKTPTLSRFEESSQCNAFSITNCVRCLESIE-GVDGSTYIKAIKMFKDVDWREMFMAMSA 286

Query: 346  ARRRDVLLSIE 314
             RR   L S+E
Sbjct: 287  ERRLVWLASLE 297


>ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD17-like [Vitis vinifera]
          Length = 1013

 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 68/242 (28%), Positives = 116/242 (47%), Gaps = 12/242 (4%)
 Frame = -1

Query: 1027 YYLRFGLKYLPKAYKNKHQNMKERFREFKALVEKTSGTGFNQVLGTFIASDSWWDDYIKT 848
            ++ + GLK+  +  KN++  ++ ++   K+L+++ S   +++  G   A D  WD+YIK 
Sbjct: 765  FFKKTGLKWDKEQLKNRYAVLRRQYVIVKSLLDQ-SDFNWDENTGIITAKDEAWDNYIKE 823

Query: 847  HKKAKHLKRLRVRGCPEYKDLQIIFGDTIATGSNRASVSYNFDSTDEENGEKEATAESPM 668
            H  A+ +   R  GCP YK L  IF ++ A G+N  S  +          E+    E P 
Sbjct: 824  HPDAESM---RSAGCPIYKQLCTIFSESGANGTNEQSAEH----------EEGIPYEYPC 870

Query: 667  PPQVQNSEGGNNRENNDYGTQST-QNKSQS------HSRKRERSDPKGSELTEAVKMLAE 509
            P  +      ++ E++D    +  Q+  QS       SRKR R     + +  A+  +A 
Sbjct: 871  PEPLSMHREESSSESDDVAEMADGQDNFQSTLPTGISSRKRGRRG-IDNVIAGAILEMAA 929

Query: 508  ASQARV----EKRGKFSITECVDII-EAMGIEIGRKTYVKAISLFQDKGWREAFLHMSDA 344
            AS+ R     ++  KFSIT CV  + E  G++   + Y  A+ LF +   RE FL +   
Sbjct: 930  ASKLRTAAIKQRNAKFSITNCVQALDEIQGVD--ERVYFAALDLFDNPNAREIFLSLKSD 987

Query: 343  RR 338
            +R
Sbjct: 988  KR 989


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