BLASTX nr result

ID: Coptis25_contig00024575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024575
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135277.1| PREDICTED: uncharacterized protein LOC101223...    79   3e-13
gb|ABG37640.1| ATP-binding protein [Populus trichocarpa]               77   1e-12
ref|XP_002282396.1| PREDICTED: uncharacterized protein LOC100249...    77   2e-12
ref|XP_002530040.1| ATP binding protein, putative [Ricinus commu...    77   2e-12
emb|CAN81865.1| hypothetical protein VITISV_010592 [Vitis vinifera]    77   2e-12

>ref|XP_004135277.1| PREDICTED: uncharacterized protein LOC101223159 [Cucumis sativus]
           gi|449520695|ref|XP_004167369.1| PREDICTED:
           uncharacterized LOC101223159 [Cucumis sativus]
          Length = 627

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
 Frame = -2

Query: 204 RIENTSSR-LVLPSSDFQLLCSQQLDLFRAVVDIRRDAVLSVYVRPAGSYVMDRLELWRI 28
           RIEN+ +  LVLPS DFQ LC +QLDLFR +VD   DA+LSVYVRPAGSYVMDRLEL R+
Sbjct: 104 RIENSQNTGLVLPSPDFQRLCIEQLDLFRRIVD--PDALLSVYVRPAGSYVMDRLELRRV 161

Query: 27  NVAQGADI 4
               G ++
Sbjct: 162 ASFPGVNV 169


>gb|ABG37640.1| ATP-binding protein [Populus trichocarpa]
          Length = 771

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/63 (63%), Positives = 47/63 (74%)
 Frame = -2

Query: 195 NTSSRLVLPSSDFQLLCSQQLDLFRAVVDIRRDAVLSVYVRPAGSYVMDRLELWRINVAQ 16
           +  ++LVLPS DFQ LC QQLDLF  +VD   DA+LSVYVRPAGSYVMDRLEL R+    
Sbjct: 308 DNKTKLVLPSPDFQRLCVQQLDLFHRIVD--PDAILSVYVRPAGSYVMDRLELRRVTSYP 365

Query: 15  GAD 7
           G +
Sbjct: 366 GVN 368


>ref|XP_002282396.1| PREDICTED: uncharacterized protein LOC100249068 [Vitis vinifera]
           gi|296081359|emb|CBI16792.3| unnamed protein product
           [Vitis vinifera]
          Length = 627

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/72 (63%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
 Frame = -2

Query: 204 RIE-NTSSRLVLPSSDFQLLCSQQLDLFRAVVDIRRDAVLSVYVRPAGSYVMDRLELWRI 28
           RIE N  + LVLPS DFQ LC +QLDLF  +VD   +A+LSVYVRPAGSYVMDRLEL R+
Sbjct: 114 RIEKNQKNGLVLPSPDFQRLCLEQLDLFHRIVD--PNALLSVYVRPAGSYVMDRLELRRV 171

Query: 27  NV---AQGADIV 1
                  GADIV
Sbjct: 172 TFYPGVNGADIV 183


>ref|XP_002530040.1| ATP binding protein, putative [Ricinus communis]
           gi|223530456|gb|EEF32340.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 710

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/62 (64%), Positives = 48/62 (77%)
 Frame = -2

Query: 198 ENTSSRLVLPSSDFQLLCSQQLDLFRAVVDIRRDAVLSVYVRPAGSYVMDRLELWRINVA 19
           ++  S+LVLPS DF+ LC +QLDLFR +VD   DA+LSVYVRPAGSYVMDRLEL R+   
Sbjct: 183 KSDKSKLVLPSLDFRRLCIEQLDLFRRIVD--PDAILSVYVRPAGSYVMDRLELRRVTSY 240

Query: 18  QG 13
            G
Sbjct: 241 PG 242


>emb|CAN81865.1| hypothetical protein VITISV_010592 [Vitis vinifera]
          Length = 608

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/72 (63%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
 Frame = -2

Query: 204 RIE-NTSSRLVLPSSDFQLLCSQQLDLFRAVVDIRRDAVLSVYVRPAGSYVMDRLELWRI 28
           RIE N  + LVLPS DFQ LC +QLDLF  +VD   +A+LSVYVRPAGSYVMDRLEL R+
Sbjct: 114 RIEKNQKNGLVLPSPDFQRLCLEQLDLFHRIVD--PNALLSVYVRPAGSYVMDRLELRRV 171

Query: 27  NV---AQGADIV 1
                  GADIV
Sbjct: 172 TFYPGVNGADIV 183


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