BLASTX nr result
ID: Coptis25_contig00024575
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024575 (205 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004135277.1| PREDICTED: uncharacterized protein LOC101223... 79 3e-13 gb|ABG37640.1| ATP-binding protein [Populus trichocarpa] 77 1e-12 ref|XP_002282396.1| PREDICTED: uncharacterized protein LOC100249... 77 2e-12 ref|XP_002530040.1| ATP binding protein, putative [Ricinus commu... 77 2e-12 emb|CAN81865.1| hypothetical protein VITISV_010592 [Vitis vinifera] 77 2e-12 >ref|XP_004135277.1| PREDICTED: uncharacterized protein LOC101223159 [Cucumis sativus] gi|449520695|ref|XP_004167369.1| PREDICTED: uncharacterized LOC101223159 [Cucumis sativus] Length = 627 Score = 79.3 bits (194), Expect = 3e-13 Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 1/68 (1%) Frame = -2 Query: 204 RIENTSSR-LVLPSSDFQLLCSQQLDLFRAVVDIRRDAVLSVYVRPAGSYVMDRLELWRI 28 RIEN+ + LVLPS DFQ LC +QLDLFR +VD DA+LSVYVRPAGSYVMDRLEL R+ Sbjct: 104 RIENSQNTGLVLPSPDFQRLCIEQLDLFRRIVD--PDALLSVYVRPAGSYVMDRLELRRV 161 Query: 27 NVAQGADI 4 G ++ Sbjct: 162 ASFPGVNV 169 >gb|ABG37640.1| ATP-binding protein [Populus trichocarpa] Length = 771 Score = 77.0 bits (188), Expect = 1e-12 Identities = 40/63 (63%), Positives = 47/63 (74%) Frame = -2 Query: 195 NTSSRLVLPSSDFQLLCSQQLDLFRAVVDIRRDAVLSVYVRPAGSYVMDRLELWRINVAQ 16 + ++LVLPS DFQ LC QQLDLF +VD DA+LSVYVRPAGSYVMDRLEL R+ Sbjct: 308 DNKTKLVLPSPDFQRLCVQQLDLFHRIVD--PDAILSVYVRPAGSYVMDRLELRRVTSYP 365 Query: 15 GAD 7 G + Sbjct: 366 GVN 368 >ref|XP_002282396.1| PREDICTED: uncharacterized protein LOC100249068 [Vitis vinifera] gi|296081359|emb|CBI16792.3| unnamed protein product [Vitis vinifera] Length = 627 Score = 76.6 bits (187), Expect = 2e-12 Identities = 46/72 (63%), Positives = 52/72 (72%), Gaps = 4/72 (5%) Frame = -2 Query: 204 RIE-NTSSRLVLPSSDFQLLCSQQLDLFRAVVDIRRDAVLSVYVRPAGSYVMDRLELWRI 28 RIE N + LVLPS DFQ LC +QLDLF +VD +A+LSVYVRPAGSYVMDRLEL R+ Sbjct: 114 RIEKNQKNGLVLPSPDFQRLCLEQLDLFHRIVD--PNALLSVYVRPAGSYVMDRLELRRV 171 Query: 27 NV---AQGADIV 1 GADIV Sbjct: 172 TFYPGVNGADIV 183 >ref|XP_002530040.1| ATP binding protein, putative [Ricinus communis] gi|223530456|gb|EEF32340.1| ATP binding protein, putative [Ricinus communis] Length = 710 Score = 76.6 bits (187), Expect = 2e-12 Identities = 40/62 (64%), Positives = 48/62 (77%) Frame = -2 Query: 198 ENTSSRLVLPSSDFQLLCSQQLDLFRAVVDIRRDAVLSVYVRPAGSYVMDRLELWRINVA 19 ++ S+LVLPS DF+ LC +QLDLFR +VD DA+LSVYVRPAGSYVMDRLEL R+ Sbjct: 183 KSDKSKLVLPSLDFRRLCIEQLDLFRRIVD--PDAILSVYVRPAGSYVMDRLELRRVTSY 240 Query: 18 QG 13 G Sbjct: 241 PG 242 >emb|CAN81865.1| hypothetical protein VITISV_010592 [Vitis vinifera] Length = 608 Score = 76.6 bits (187), Expect = 2e-12 Identities = 46/72 (63%), Positives = 52/72 (72%), Gaps = 4/72 (5%) Frame = -2 Query: 204 RIE-NTSSRLVLPSSDFQLLCSQQLDLFRAVVDIRRDAVLSVYVRPAGSYVMDRLELWRI 28 RIE N + LVLPS DFQ LC +QLDLF +VD +A+LSVYVRPAGSYVMDRLEL R+ Sbjct: 114 RIEKNQKNGLVLPSPDFQRLCLEQLDLFHRIVD--PNALLSVYVRPAGSYVMDRLELRRV 171 Query: 27 NV---AQGADIV 1 GADIV Sbjct: 172 TFYPGVNGADIV 183