BLASTX nr result

ID: Coptis25_contig00024564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024564
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268266.2| PREDICTED: putative disease resistance prote...   169   3e-40
ref|XP_002269044.2| PREDICTED: putative disease resistance prote...   168   6e-40
ref|XP_002267795.1| PREDICTED: putative disease resistance prote...   166   4e-39
emb|CAN78628.1| hypothetical protein VITISV_034887 [Vitis vinifera]   166   4e-39
ref|XP_002268547.2| PREDICTED: putative disease resistance prote...   165   6e-39

>ref|XP_002268266.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 932

 Score =  169 bits (429), Expect = 3e-40
 Identities = 85/184 (46%), Positives = 122/184 (66%)
 Frame = +1

Query: 40  RNKVLSYLFSPCFRFKDVGFRHDIGIKIKQVRERLNVIAEEKNQYNLIARQSSVRPRQLT 219
           +NKV S + SPCF FK V  R DI +KIK ++++L+VIA E+ ++N I+  +    R +T
Sbjct: 102 KNKVSSCIPSPCFCFKQVASRRDIALKIKDLKQQLDVIASERTRFNFISSGTQEPQRLIT 161

Query: 220 SSVIDVSKVYGRDHDKVVIMGMLFGESSRQVMPVHVISIVGTGGFGKTTLAKLILKEVKV 399
           +S IDVS+VYGRD D   I+G L GE+  +   +++I+IVGTGG GKTTLA+L     +V
Sbjct: 162 TSAIDVSEVYGRDTDVNAILGRLLGENDEEKSRLYIIAIVGTGGMGKTTLAQLAYNHPEV 221

Query: 400 TTAFDKTMWVCVSEPFDRVRVAKEIIEQTGKEVRNVIAWEVLHNLLCESLKGKKFFLVLD 579
              FD+ +WVCVS+PFD +RV + I+E   K+  N+   E +   +   + GKKF LVLD
Sbjct: 222 KAHFDERIWVCVSDPFDPIRVCRAIVETLQKKPCNLHDLEAVQQEIQTCIAGKKFLLVLD 281

Query: 580 DVWT 591
           D+WT
Sbjct: 282 DMWT 285


>ref|XP_002269044.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 919

 Score =  168 bits (426), Expect = 6e-40
 Identities = 86/185 (46%), Positives = 123/185 (66%), Gaps = 1/185 (0%)
 Frame = +1

Query: 40  RNKVLSYLFSPCFRFKDVGFRHDIGIKIKQVRERLNVIAEEKNQYNLIARQSSVRPRQLT 219
           + KV S + SPCF  K V  R DI +KIK ++++L+VIA +++Q+N I+  S    R +T
Sbjct: 102 KKKVSSCIPSPCFCLKQVASRRDIALKIKGIKQQLDVIASQRSQFNFISSLSEEPQRFIT 161

Query: 220 SSVIDVSKVYGRDHDKVVIMGMLFGESSRQVMP-VHVISIVGTGGFGKTTLAKLILKEVK 396
           +S +D+ +VYGRD DK  I+G L GE+ ++     H+ISIVGTGG GKTTLA+L     +
Sbjct: 162 TSQLDIPEVYGRDMDKNTILGHLLGETCQETESGPHIISIVGTGGMGKTTLAQLAYNHPE 221

Query: 397 VTTAFDKTMWVCVSEPFDRVRVAKEIIEQTGKEVRNVIAWEVLHNLLCESLKGKKFFLVL 576
           V   FD+ +WVCVS+PFD +R+ +EI+E   +E  N+ + E L   +   + GKKF LVL
Sbjct: 222 VKAHFDERIWVCVSDPFDPIRIFREIVEILQRESPNLHSLEALQQKIQTCIAGKKFLLVL 281

Query: 577 DDVWT 591
           DDVWT
Sbjct: 282 DDVWT 286


>ref|XP_002267795.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 928

 Score =  166 bits (419), Expect = 4e-39
 Identities = 87/192 (45%), Positives = 125/192 (65%), Gaps = 2/192 (1%)
 Frame = +1

Query: 22  AVNGGI-RNKVLSYLFSPCFRFKDVGFRHDIGIKIKQVRERLNVIAEEKNQYNLIARQSS 198
           A N GI + K+ S L SPC  FK V  RHDI ++IK ++++LN IA E+NQ+N ++    
Sbjct: 94  AENPGIPKPKISSCLPSPCVCFKQVSLRHDIALQIKDIKKQLNAIANERNQFNFVSSSII 153

Query: 199 VRP-RQLTSSVIDVSKVYGRDHDKVVIMGMLFGESSRQVMPVHVISIVGTGGFGKTTLAK 375
            +P R++TSSVIDVS+  GRD D  +I+G L G S ++   ++++SIVG GG GKTTLA+
Sbjct: 154 QQPHRRITSSVIDVSQFCGRDADINIIIGKLLGGSCQESSSLYIVSIVGMGGIGKTTLAQ 213

Query: 376 LILKEVKVTTAFDKTMWVCVSEPFDRVRVAKEIIEQTGKEVRNVIAWEVLHNLLCESLKG 555
           L     KV + F + MWVCVS+PFD +R+++ I+E   K+       E +   +C  +  
Sbjct: 214 LAYNHEKVKSYFHERMWVCVSDPFDPMRISRAILEALQKKSSGFHDLEAVQQKICTLIAD 273

Query: 556 KKFFLVLDDVWT 591
           +KF LVLDDVWT
Sbjct: 274 EKFLLVLDDVWT 285


>emb|CAN78628.1| hypothetical protein VITISV_034887 [Vitis vinifera]
          Length = 541

 Score =  166 bits (419), Expect = 4e-39
 Identities = 83/183 (45%), Positives = 120/183 (65%)
 Frame = +1

Query: 43  NKVLSYLFSPCFRFKDVGFRHDIGIKIKQVRERLNVIAEEKNQYNLIARQSSVRPRQLTS 222
           NKV S + SPCF FK V  R DI +KIK ++++L+VI  E+ ++N I+  +    R +T+
Sbjct: 103 NKVSSCIPSPCFCFKQVASRRDIALKIKDLKQQLDVIGSERTRFNFISSGTQEPQRLITT 162

Query: 223 SVIDVSKVYGRDHDKVVIMGMLFGESSRQVMPVHVISIVGTGGFGKTTLAKLILKEVKVT 402
           S IDVS+VYGRD D   I+G L GE+  +   +++I+IVGTGG GKTTLA+L     +V 
Sbjct: 163 SAIDVSEVYGRDTDVNAILGRLLGENDEEKSRLYIIAIVGTGGMGKTTLAQLAYNHPEVK 222

Query: 403 TAFDKTMWVCVSEPFDRVRVAKEIIEQTGKEVRNVIAWEVLHNLLCESLKGKKFFLVLDD 582
             FD+ +WVCVS+PFD +RV + I+E   K+  N+   E +   +   + G+KF LVLDD
Sbjct: 223 AHFDERIWVCVSDPFDPIRVCRAIVETLQKKPCNLHDLEAVQQEIQTCIAGQKFLLVLDD 282

Query: 583 VWT 591
           +WT
Sbjct: 283 MWT 285


>ref|XP_002268547.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 880

 Score =  165 bits (417), Expect = 6e-39
 Identities = 84/191 (43%), Positives = 124/191 (64%), Gaps = 1/191 (0%)
 Frame = +1

Query: 22  AVNGGIRNKVLSYLFSPCFRFKDVGFRHDIGIKIKQVRERLNVIAEEKNQYNLIARQSSV 201
           A +  +  KV S + SPCF  K V  R DI +K+K ++++L+VIA +++Q+N I+  S  
Sbjct: 95  AESASMSKKVSSCIPSPCFCLKQVASRRDIALKVKSIKQQLDVIASQRSQFNFISSLSEE 154

Query: 202 RPRQLTSSVIDVSKVYGRDHDKVVIMGMLFGESSRQVMP-VHVISIVGTGGFGKTTLAKL 378
             R +T+S +D+ +VYGRD DK  I+G L GE+ ++     ++ISIVGTGG GKTTLA+L
Sbjct: 155 PQRFITTSQLDIPEVYGRDMDKNTILGHLLGETCQETKSGPYIISIVGTGGMGKTTLAQL 214

Query: 379 ILKEVKVTTAFDKTMWVCVSEPFDRVRVAKEIIEQTGKEVRNVIAWEVLHNLLCESLKGK 558
                +V   FD+ +WVCVS+PFD +R+ +EI+E    E  N+ + E L   +   + GK
Sbjct: 215 AYNHPEVKAHFDERIWVCVSDPFDPIRIFREIVEILQGESPNLHSLEALQQKIQTCIAGK 274

Query: 559 KFFLVLDDVWT 591
           KF +VLDDVWT
Sbjct: 275 KFLIVLDDVWT 285


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