BLASTX nr result
ID: Coptis25_contig00024560
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00024560
(1168 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002323061.1| predicted protein [Populus trichocarpa] gi|2... 376 e-123
emb|CBI18054.3| unnamed protein product [Vitis vinifera] 388 e-105
ref|XP_002266747.1| PREDICTED: U-box domain-containing protein 1... 388 e-105
emb|CAN71048.1| hypothetical protein VITISV_006741 [Vitis vinifera] 388 e-105
ref|XP_002308247.1| predicted protein [Populus trichocarpa] gi|2... 370 e-100
>ref|XP_002323061.1| predicted protein [Populus trichocarpa] gi|222867691|gb|EEF04822.1|
predicted protein [Populus trichocarpa]
Length = 654
Score = 376 bits (965), Expect(2) = e-123
Identities = 187/305 (61%), Positives = 235/305 (77%)
Frame = -1
Query: 916 LCFEEIHIVLQRIKSLLEDCCSGSKMWLLMQNESISNSYHELTVDLSTLLDIFPLKEFNL 737
LCFEE+++VLQRIK+LLEDC +GSKMWLLMQ++S++N++HELTV+L+TLLDIF +KE +
Sbjct: 86 LCFEEMYLVLQRIKTLLEDCVNGSKMWLLMQSDSVANNFHELTVELATLLDIFSVKEVEV 145
Query: 736 NEDVKEIVVLVRKQCWEKKAFVDPTDKNLRLEVCKLLDQIKKEIVPDYSKLKGIFGRLGL 557
+EDV+E+ +L+RKQC + K FVD D +LRL+V +LD+I+KEIVPD SKL IF LGL
Sbjct: 146 SEDVEELFLLLRKQCSQAKVFVDKRDSSLRLDVLTMLDRIQKEIVPDNSKLAEIFDFLGL 205
Query: 556 RDSKSCKXXXXXXXXXIRNQSSDKLADEIISLIGLVRYAKCVLYGASTPRFESKSRSELA 377
+S SCK ++NQ +K ++I+LIGLVRYAKCVL+ TP +SK++ +
Sbjct: 206 PNSLSCKEEIENLEDEVQNQKDEKAKSDMIALIGLVRYAKCVLFEPLTPGSDSKTKKLAS 265
Query: 376 DTIVPADFRCPISLDLMTDPVVVATGQTYDRASINHWIDSGHKTCPKTGQELVHTNLITN 197
D +PADFRCPISLDLM DPVV+ATGQTYDR SI WI+SGH TCPKTGQ LVHT+LI N
Sbjct: 266 DANIPADFRCPISLDLMRDPVVMATGQTYDRESIALWIESGHNTCPKTGQALVHTSLIPN 325
Query: 196 HALKNLIAIWCREQNIPFEATETNYRLNGSVPNKAALEATKMTALFLVTKLLATPSNELA 17
ALKNLIA+WCRE IPFE N R NG + NKAALEATKMTA FLV K+ A+ S E
Sbjct: 326 QALKNLIAMWCRELKIPFETAGDNNRTNGVIKNKAALEATKMTASFLVNKMSASQSMEAV 385
Query: 16 NRLVY 2
N ++Y
Sbjct: 386 NGVIY 390
Score = 95.1 bits (235), Expect(2) = e-123
Identities = 46/88 (52%), Positives = 66/88 (75%)
Frame = -2
Query: 1155 QVFPPRKRRPSPEAFVSPKFSDLKLIQSVFHLTQEISALTPLNTILKRYSCSMMGKSKLL 976
QVFPPRKRRPS AF+ PKFSD +L+QS+F L+QEIS+L PL +LKR S S++ K+K+L
Sbjct: 7 QVFPPRKRRPSAGAFIPPKFSDQRLLQSLFLLSQEISSLKPLQFLLKRNSLSIIRKAKIL 66
Query: 975 AVLFEEILRNRVVFLPNPQNCVSKRFIL 892
A+LFEE+L+ ++ L C + +++
Sbjct: 67 AILFEELLKKPILVLSPTLLCFEEMYLV 94
>emb|CBI18054.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 388 bits (996), Expect = e-105
Identities = 186/307 (60%), Positives = 233/307 (75%)
Frame = -1
Query: 922 AKLCFEEIHIVLQRIKSLLEDCCSGSKMWLLMQNESISNSYHELTVDLSTLLDIFPLKEF 743
A LCFEE++IVLQR+K+L+EDC +GS+ WLLMQNES+SN +HELT+DLSTLLDI P+K
Sbjct: 83 AILCFEEMYIVLQRMKTLIEDCSNGSRTWLLMQNESVSNGFHELTLDLSTLLDIIPVKGL 142
Query: 742 NLNEDVKEIVVLVRKQCWEKKAFVDPTDKNLRLEVCKLLDQIKKEIVPDYSKLKGIFGRL 563
+L ED++E+V+L+RKQC E A+VDPTD+ LR ++ K+LDQIK+EIVPD+ KL IF +L
Sbjct: 143 DLVEDIEELVLLIRKQCSETAAYVDPTDETLRRDLLKMLDQIKREIVPDHKKLAEIFEKL 202
Query: 562 GLRDSKSCKXXXXXXXXXIRNQSSDKLADEIISLIGLVRYAKCVLYGASTPRFESKSRSE 383
L+DS SC +NQ DK E+ +LIGLVRYAKCVL+GASTP+ + +
Sbjct: 203 DLQDSASCSDEIKSLEEEFQNQRDDKSKSEVTALIGLVRYAKCVLFGASTPKSHGRRQKS 262
Query: 382 LADTIVPADFRCPISLDLMTDPVVVATGQTYDRASINHWIDSGHKTCPKTGQELVHTNLI 203
+ DTI+PADFRCPI+LDLM DPVVVATGQTYDR SIN WI+SGH CPKTGQ L HTNLI
Sbjct: 263 MTDTIIPADFRCPITLDLMRDPVVVATGQTYDRTSINRWIESGHNMCPKTGQILAHTNLI 322
Query: 202 TNHALKNLIAIWCREQNIPFEATETNYRLNGSVPNKAALEATKMTALFLVTKLLATPSNE 23
N AL+NLI +WCREQ IPF+ TE N ++ + NK ATKMT LFL+ KL + S E
Sbjct: 323 QNRALRNLIILWCREQEIPFQTTEVNDKVKAATQNKTLFGATKMTVLFLINKLTDSESVE 382
Query: 22 LANRLVY 2
NR+V+
Sbjct: 383 ATNRVVH 389
Score = 82.4 bits (202), Expect = 2e-13
Identities = 45/92 (48%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Frame = -2
Query: 1143 PRKRRPSPEAFVSPKFSDLKLIQSVFHLTQEISALTPLNTILKRYSCSMMGKSKLLAVLF 964
PRKRRPS +F+SP SD +L+QS+ ++QEIS+L PL +LKR S S++ KS LLA LF
Sbjct: 9 PRKRRPSAGSFISPTLSDRRLVQSLLLVSQEISSLAPLQFLLKRNSVSIIRKSNLLAFLF 68
Query: 963 EEILRNRV-VFLPNPQNCVSKRFILYYKGSNL 871
EE+LRN V F P C + +I+ + L
Sbjct: 69 EELLRNPVSCFAPTAILCFEEMYIVLQRMKTL 100
>ref|XP_002266747.1| PREDICTED: U-box domain-containing protein 16 [Vitis vinifera]
Length = 677
Score = 388 bits (996), Expect = e-105
Identities = 186/307 (60%), Positives = 233/307 (75%)
Frame = -1
Query: 922 AKLCFEEIHIVLQRIKSLLEDCCSGSKMWLLMQNESISNSYHELTVDLSTLLDIFPLKEF 743
A LCFEE++IVLQR+K+L+EDC +GS+ WLLMQNES+SN +HELT+DLSTLLDI P+K
Sbjct: 83 AILCFEEMYIVLQRMKTLIEDCSNGSRTWLLMQNESVSNGFHELTLDLSTLLDIIPVKGL 142
Query: 742 NLNEDVKEIVVLVRKQCWEKKAFVDPTDKNLRLEVCKLLDQIKKEIVPDYSKLKGIFGRL 563
+L ED++E+V+L+RKQC E A+VDPTD+ LR ++ K+LDQIK+EIVPD+ KL IF +L
Sbjct: 143 DLVEDIEELVLLIRKQCSETAAYVDPTDETLRRDLLKMLDQIKREIVPDHKKLAEIFEKL 202
Query: 562 GLRDSKSCKXXXXXXXXXIRNQSSDKLADEIISLIGLVRYAKCVLYGASTPRFESKSRSE 383
L+DS SC +NQ DK E+ +LIGLVRYAKCVL+GASTP+ + +
Sbjct: 203 DLQDSASCSDEIKSLEEEFQNQRDDKSKSEVTALIGLVRYAKCVLFGASTPKSHGRRQKS 262
Query: 382 LADTIVPADFRCPISLDLMTDPVVVATGQTYDRASINHWIDSGHKTCPKTGQELVHTNLI 203
+ DTI+PADFRCPI+LDLM DPVVVATGQTYDR SIN WI+SGH CPKTGQ L HTNLI
Sbjct: 263 MTDTIIPADFRCPITLDLMRDPVVVATGQTYDRTSINRWIESGHNMCPKTGQILAHTNLI 322
Query: 202 TNHALKNLIAIWCREQNIPFEATETNYRLNGSVPNKAALEATKMTALFLVTKLLATPSNE 23
N AL+NLI +WCREQ IPF+ TE N ++ + NK ATKMT LFL+ KL + S E
Sbjct: 323 QNRALRNLIILWCREQEIPFQTTEVNDKVKAATQNKTLFGATKMTVLFLINKLTDSESVE 382
Query: 22 LANRLVY 2
NR+V+
Sbjct: 383 ATNRVVH 389
Score = 82.4 bits (202), Expect = 2e-13
Identities = 45/92 (48%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Frame = -2
Query: 1143 PRKRRPSPEAFVSPKFSDLKLIQSVFHLTQEISALTPLNTILKRYSCSMMGKSKLLAVLF 964
PRKRRPS +F+SP SD +L+QS+ ++QEIS+L PL +LKR S S++ KS LLA LF
Sbjct: 9 PRKRRPSAGSFISPTLSDRRLVQSLLLVSQEISSLAPLQFLLKRNSVSIIRKSNLLAFLF 68
Query: 963 EEILRNRV-VFLPNPQNCVSKRFILYYKGSNL 871
EE+LRN V F P C + +I+ + L
Sbjct: 69 EELLRNPVSCFAPTAILCFEEMYIVLQRMKTL 100
>emb|CAN71048.1| hypothetical protein VITISV_006741 [Vitis vinifera]
Length = 677
Score = 388 bits (996), Expect = e-105
Identities = 186/307 (60%), Positives = 233/307 (75%)
Frame = -1
Query: 922 AKLCFEEIHIVLQRIKSLLEDCCSGSKMWLLMQNESISNSYHELTVDLSTLLDIFPLKEF 743
A LCFEE++IVLQR+K+L+EDC +GS+ WLLMQNES+SN +HELT+DLSTLLDI P+K
Sbjct: 83 AILCFEEMYIVLQRMKTLIEDCSNGSRTWLLMQNESVSNGFHELTLDLSTLLDIIPVKGL 142
Query: 742 NLNEDVKEIVVLVRKQCWEKKAFVDPTDKNLRLEVCKLLDQIKKEIVPDYSKLKGIFGRL 563
+L ED++E+V+L+RKQC E A+VDPTD+ LR ++ K+LDQIK+EIVPD+ KL IF +L
Sbjct: 143 DLVEDIEELVLLIRKQCSETAAYVDPTDETLRRDLLKMLDQIKREIVPDHKKLAEIFEKL 202
Query: 562 GLRDSKSCKXXXXXXXXXIRNQSSDKLADEIISLIGLVRYAKCVLYGASTPRFESKSRSE 383
L+DS SC +NQ DK E+ +LIGLVRYAKCVL+GASTP+ + +
Sbjct: 203 DLQDSASCSDEIKSLEEEFQNQRDDKSKSEVTALIGLVRYAKCVLFGASTPKSHGRRQKS 262
Query: 382 LADTIVPADFRCPISLDLMTDPVVVATGQTYDRASINHWIDSGHKTCPKTGQELVHTNLI 203
+ DTI+PADFRCPI+LDLM DPVVVATGQTYDR SIN WI+SGH CPKTGQ L HTNLI
Sbjct: 263 MTDTIIPADFRCPITLDLMRDPVVVATGQTYDRTSINRWIESGHNXCPKTGQILAHTNLI 322
Query: 202 TNHALKNLIAIWCREQNIPFEATETNYRLNGSVPNKAALEATKMTALFLVTKLLATPSNE 23
N AL+NLI +WCREQ IPF+ TE N ++ + NK ATKMT LFL+ KL + S E
Sbjct: 323 QNRALRNLIILWCREQEIPFQTTEVNDKVKAATQNKTLFGATKMTVLFLINKLTDSESVE 382
Query: 22 LANRLVY 2
NR+V+
Sbjct: 383 ATNRVVH 389
Score = 82.4 bits (202), Expect = 2e-13
Identities = 45/92 (48%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Frame = -2
Query: 1143 PRKRRPSPEAFVSPKFSDLKLIQSVFHLTQEISALTPLNTILKRYSCSMMGKSKLLAVLF 964
PRKRRPS +F+SP SD +L+QS+ ++QEIS+L PL +LKR S S++ KS LLA LF
Sbjct: 9 PRKRRPSAGSFISPTLSDRRLVQSLLLVSQEISSLAPLQFLLKRNSVSIIRKSNLLAFLF 68
Query: 963 EEILRNRV-VFLPNPQNCVSKRFILYYKGSNL 871
EE+LRN V F P C + +I+ + L
Sbjct: 69 EELLRNPVSCFAPTAILCFEEMYIVLQRMKTL 100
>ref|XP_002308247.1| predicted protein [Populus trichocarpa] gi|222854223|gb|EEE91770.1|
predicted protein [Populus trichocarpa]
Length = 679
Score = 370 bits (951), Expect = e-100
Identities = 183/305 (60%), Positives = 234/305 (76%)
Frame = -1
Query: 916 LCFEEIHIVLQRIKSLLEDCCSGSKMWLLMQNESISNSYHELTVDLSTLLDIFPLKEFNL 737
LCFEE+++VLQR K+LLEDC +GS+MWLLMQ++S++N++ ELTV+L+TLLDIFP+KE +
Sbjct: 85 LCFEEMYLVLQRFKTLLEDCVNGSRMWLLMQSDSVANNFLELTVELATLLDIFPVKEVEI 144
Query: 736 NEDVKEIVVLVRKQCWEKKAFVDPTDKNLRLEVCKLLDQIKKEIVPDYSKLKGIFGRLGL 557
+E+V+E+ +L+RKQC + K FVD D NLR +V +LD+I+KEIVPD+SKL IF LG
Sbjct: 145 SEEVEELFLLLRKQCSKAKTFVDKRDYNLRQDVLTMLDRIQKEIVPDHSKLAEIFYLLGF 204
Query: 556 RDSKSCKXXXXXXXXXIRNQSSDKLADEIISLIGLVRYAKCVLYGASTPRFESKSRSELA 377
R+S SCK ++NQ +K ++I+LIGLVRY KCVL+ STP +S+S+ +
Sbjct: 205 RNSLSCKEEIENLEDEVQNQKDEKSKSDLIALIGLVRYVKCVLFEPSTPGADSRSKKLAS 264
Query: 376 DTIVPADFRCPISLDLMTDPVVVATGQTYDRASINHWIDSGHKTCPKTGQELVHTNLITN 197
D VP DFRCPISLDLM DPVVVATGQTYDR SIN WI+SGH TCPKTGQ LV+TNLI N
Sbjct: 265 DVNVPVDFRCPISLDLMRDPVVVATGQTYDRESINLWIESGHSTCPKTGQALVNTNLIPN 324
Query: 196 HALKNLIAIWCREQNIPFEATETNYRLNGSVPNKAALEATKMTALFLVTKLLATPSNELA 17
ALKNLIA+WCREQ IPFE E N R++ + +KAALEA KMT FLV K+ A+ S E
Sbjct: 325 RALKNLIAMWCREQKIPFETAEGNNRIDRVIKSKAALEANKMTVSFLVNKMSASQSMEAV 384
Query: 16 NRLVY 2
N ++Y
Sbjct: 385 NGVIY 389
Score = 97.4 bits (241), Expect = 6e-18
Identities = 46/95 (48%), Positives = 69/95 (72%)
Frame = -2
Query: 1155 QVFPPRKRRPSPEAFVSPKFSDLKLIQSVFHLTQEISALTPLNTILKRYSCSMMGKSKLL 976
QVFPPRKRRPS AF+ PKFSD +L+Q++ L+QEIS+L PL +LKR S S++ K+K+L
Sbjct: 6 QVFPPRKRRPSAGAFIPPKFSDQRLLQTLLELSQEISSLKPLQFLLKRNSSSILRKTKIL 65
Query: 975 AVLFEEILRNRVVFLPNPQNCVSKRFILYYKGSNL 871
++LFEE+L+N ++FL C + +++ + L
Sbjct: 66 SILFEELLKNPILFLSPTLLCFEEMYLVLQRFKTL 100