BLASTX nr result

ID: Coptis25_contig00024558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024558
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531279.1| Prenylated Rab acceptor protein, putative [R...    72   5e-11
ref|XP_004156493.1| PREDICTED: PRA1 family protein E-like [Cucum...    70   1e-10
ref|XP_004139244.1| PREDICTED: PRA1 family protein E-like [Cucum...    70   1e-10
ref|XP_002307629.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_002328337.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10

>ref|XP_002531279.1| Prenylated Rab acceptor protein, putative [Ricinus communis]
           gi|223529112|gb|EEF31092.1| Prenylated Rab acceptor
           protein, putative [Ricinus communis]
          Length = 216

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/86 (44%), Positives = 50/86 (58%)
 Frame = -1

Query: 266 VDPSTFSRPYNYNEAMTRIKTNVYHFRVNYTXXXXXXXXXXXLWHPISMXXXXXXXXXXX 87
           ++PS+FS P NY+EAM+R+K NV +FRVNY            LWHP+SM           
Sbjct: 60  LNPSSFSCPCNYSEAMSRVKYNVNYFRVNYAMVVLSVLFLSLLWHPVSMIVFIVVFIAWF 119

Query: 86  XXXXFRDEEVVVFNWKFNDRVVLGVL 9
                RD  +V+FN +F+DRVVL VL
Sbjct: 120 FLYFSRDGPIVLFNREFDDRVVLVVL 145


>ref|XP_004156493.1| PREDICTED: PRA1 family protein E-like [Cucumis sativus]
          Length = 213

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/86 (43%), Positives = 49/86 (56%)
 Frame = -1

Query: 263 DPSTFSRPYNYNEAMTRIKTNVYHFRVNYTXXXXXXXXXXXLWHPISMXXXXXXXXXXXX 84
           D S FS P++Y++AM RI+ NV +FRVNY             WHPIS+            
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 83  XXXFRDEEVVVFNWKFNDRVVLGVLS 6
              FRD+ +V+FN  F+D+VVLGVLS
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLS 146


>ref|XP_004139244.1| PREDICTED: PRA1 family protein E-like [Cucumis sativus]
          Length = 213

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/86 (43%), Positives = 49/86 (56%)
 Frame = -1

Query: 263 DPSTFSRPYNYNEAMTRIKTNVYHFRVNYTXXXXXXXXXXXLWHPISMXXXXXXXXXXXX 84
           D S FS P++Y++AM RI+ NV +FRVNY             WHPIS+            
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 83  XXXFRDEEVVVFNWKFNDRVVLGVLS 6
              FRD+ +V+FN  F+D+VVLGVLS
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLS 146


>ref|XP_002307629.1| predicted protein [Populus trichocarpa] gi|222857078|gb|EEE94625.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/87 (40%), Positives = 51/87 (58%)
 Frame = -1

Query: 266 VDPSTFSRPYNYNEAMTRIKTNVYHFRVNYTXXXXXXXXXXXLWHPISMXXXXXXXXXXX 87
           ++ S+F+RP ++ EA  R+K N+Y+FRVNYT           LWHP+SM           
Sbjct: 49  IEFSSFTRPLSFGEATIRVKRNLYYFRVNYTMIILVILFLSLLWHPLSMIVFLVVFVAWF 108

Query: 86  XXXXFRDEEVVVFNWKFNDRVVLGVLS 6
               FRD+ +V+F+   +DRVVLG+LS
Sbjct: 109 FLYFFRDQPLVIFHRPIDDRVVLGLLS 135


>ref|XP_002328337.1| predicted protein [Populus trichocarpa] gi|222838052|gb|EEE76417.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/83 (46%), Positives = 45/83 (54%)
 Frame = -1

Query: 257 STFSRPYNYNEAMTRIKTNVYHFRVNYTXXXXXXXXXXXLWHPISMXXXXXXXXXXXXXX 78
           S+F RP NYN+A++RIK NV +FRVNY            LWHPISM              
Sbjct: 60  SSFIRPNNYNDAISRIKFNVNYFRVNYAMIFLAILFLSLLWHPISMIVFIVMFVAWLFLY 119

Query: 77  XFRDEEVVVFNWKFNDRVVLGVL 9
             RD  VVVFN   +DRVVL VL
Sbjct: 120 FGRDGPVVVFNKSLDDRVVLCVL 142


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