BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024542
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518458.1| hepatocellular carcinoma-associated antigen,...   415   e-114
ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated...   411   e-112
ref|XP_002867461.1| hypothetical protein ARALYDRAFT_913702 [Arab...   410   e-112
ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated...   404   e-110
ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated...   403   e-110

>ref|XP_002518458.1| hepatocellular carcinoma-associated antigen, putative [Ricinus
           communis] gi|223542303|gb|EEF43845.1| hepatocellular
           carcinoma-associated antigen, putative [Ricinus
           communis]
          Length = 652

 Score =  415 bits (1067), Expect = e-114
 Identities = 199/326 (61%), Positives = 249/326 (76%), Gaps = 3/326 (0%)
 Frame = -3

Query: 971 MADIVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 792
           MAD VQYRLE+MVDELDDLE++G FT  EI EIVK+RR FEY+LKRPSPLKQD+L++IEY
Sbjct: 1   MADTVQYRLERMVDELDDLERRGFFTHQEIAEIVKQRRKFEYRLKRPSPLKQDYLAYIEY 60

Query: 791 EKQLDTXXXXXXXXXXXXL---GNKKIKRSVSDTSCVVRILRVFRLVTMRFKGDVGLWYQ 621
           E QLDT            L   GNKK+K SVSD + V RI+ ++RL   R+KGD+ LW++
Sbjct: 61  ETQLDTLRRLRKKSVARDLKEKGNKKMKMSVSDFAGVSRIVDIYRLAVTRYKGDIDLWFR 120

Query: 620 YLEFCRQHGHGRMKTVLAQVLRFHPNVPGLWMYAAGWEFDHNLNVASARNLMQRGLRACP 441
           YLEFCR   +GRMK VLAQ++RFHP VPG+W+YAA WEFDHNLNVA+AR LMQ GLR CP
Sbjct: 121 YLEFCRARRNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNLNVAAARALMQSGLRVCP 180

Query: 440 NSEDLWVEYLRMELVYLNKLKARKSLLGEDKGLLTRDNKDSDDERWEDENKDLFMALDEG 261
           NSEDLW+EYLRMEL YLNKLKARK  LGED G L RD++D+D++ W DEN  +FM+LDE 
Sbjct: 181 NSEDLWIEYLRMELTYLNKLKARKVALGEDTGTLLRDHRDADEQHWRDENNGMFMSLDEE 240

Query: 260 KTNADGSDEESENKLDVFREHASKIIQTVYSGAVEALPSSMNLRKRFLELLGNLDLTDSD 81
           + N +G +   E+K D+FRE    I+QT+YSGA+EALPSS  LRKR  E+    +L  S+
Sbjct: 241 RGNNNGINVSVEDKADLFREQGLNILQTIYSGAIEALPSSFGLRKRLFEIFEATELAHSE 300

Query: 80  NLREEILNGMRKDFAKFPEYWDWLSR 3
           ++R ++LN M++DF+   EYWDWL+R
Sbjct: 301 DMRNQLLNDMKRDFSSDSEYWDWLAR 326


>ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Vitis vinifera] gi|302144122|emb|CBI23227.3| unnamed
           protein product [Vitis vinifera]
          Length = 652

 Score =  411 bits (1056), Expect = e-112
 Identities = 196/326 (60%), Positives = 256/326 (78%), Gaps = 3/326 (0%)
 Frame = -3

Query: 971 MADIVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 792
           MAD+VQYRLE+MV+ELDDLE++G+F+R EI EIVK+RR FEY+LKRPSPLKQD+L++IEY
Sbjct: 1   MADVVQYRLERMVNELDDLERRGVFSRREIAEIVKQRRKFEYRLKRPSPLKQDYLAYIEY 60

Query: 791 EKQLDTXXXXXXXXXXXXLGNKKIKRSVSDTSCVVRILRVFRLVTMRFKGDVGLWYQYLE 612
           EKQLD+               KK K+SVSD + V RIL +++L  MR+KGD+ LW++YLE
Sbjct: 61  EKQLDSLRRLRKKSVARE-AKKKTKKSVSDFAGVSRILEIYQLAVMRYKGDIDLWFRYLE 119

Query: 611 FCRQHGHGRMKTVLAQVLRFHPNVPGLWMYAAGWEFDHNLNVASARNLMQRGLRACPNSE 432
           FCR+  +GRMK VLAQV+RFHP VPG+W+YAA WEFDHNLN  +AR LMQ GLR CP SE
Sbjct: 120 FCRERRNGRMKKVLAQVIRFHPKVPGVWIYAAAWEFDHNLNATAARALMQSGLRVCPTSE 179

Query: 431 DLWVEYLRMELVYLNKLKARKSLLGEDKGLLTRDNKDSDDERWEDENKDLFMALDEGKTN 252
           DLWVEYLRMEL YLNKLKARK  LGED+G L  D++D+D+++W +ENKDLFM+LDE + +
Sbjct: 180 DLWVEYLRMELTYLNKLKARKVALGEDEGTLINDHRDADEKQWREENKDLFMSLDEERGS 239

Query: 251 ADGS---DEESENKLDVFREHASKIIQTVYSGAVEALPSSMNLRKRFLELLGNLDLTDSD 81
            D S   +EES+ K D+F+E    I++T+YSGAVEA+PS  +LR +F E+L  ++L  S 
Sbjct: 240 RDVSNRQNEESKKKSDMFQEQGLSILRTIYSGAVEAIPSRFSLRTQFFEILEAINLAGSK 299

Query: 80  NLREEILNGMRKDFAKFPEYWDWLSR 3
            +++EIL+ M++DF+  PEYWDWL+R
Sbjct: 300 EMQKEILSDMKRDFSAEPEYWDWLAR 325


>ref|XP_002867461.1| hypothetical protein ARALYDRAFT_913702 [Arabidopsis lyrata subsp.
           lyrata] gi|297313297|gb|EFH43720.1| hypothetical protein
           ARALYDRAFT_913702 [Arabidopsis lyrata subsp. lyrata]
          Length = 652

 Score =  410 bits (1055), Expect = e-112
 Identities = 200/333 (60%), Positives = 249/333 (74%), Gaps = 10/333 (3%)
 Frame = -3

Query: 971 MADIVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 792
           MAD+VQYRLE+MVDELDDLE++GIFTR EI EIVK+RR FEY+LKRPSPLK+DF+++I+Y
Sbjct: 1   MADVVQYRLERMVDELDDLERRGIFTRAEIAEIVKQRRKFEYRLKRPSPLKEDFIAYIDY 60

Query: 791 EKQLDTXXXXXXXXXXXXLGNKKIKRSVSDTSCVVRILRVFRLVTMRFKGDVGLWYQYLE 612
           E +LD                +K K+SVSD + V RI+ ++RL TMR+KGD+ LW++YLE
Sbjct: 61  EVKLDELRQLRRKAVAYESKKRK-KKSVSDYAGVARIVEIYRLATMRYKGDINLWFRYLE 119

Query: 611 FCRQHGHGRMKTVLAQVLRFHPNVPGLWMYAAGWEFDHNLNVASARNLMQRGLRACPNSE 432
           FC+Q  HGRMK  LAQ +RFHP V G+W+YAA WEFD NLNV +AR LM  GLR C NSE
Sbjct: 120 FCKQKRHGRMKKALAQAIRFHPKVAGVWIYAASWEFDRNLNVTAARALMLNGLRVCSNSE 179

Query: 431 DLWVEYLRMELVYLNKLKARKSLLGEDKGLLTRDNKDSDDERWEDENKDLFMALDEGKTN 252
           DLWVEYLRMEL YLNKLKAR+  LGE KG L RD K  +DE+W+DENK+LFM+LDE + N
Sbjct: 180 DLWVEYLRMELTYLNKLKARRVALGESKGSLVRDTKSVEDEKWKDENKELFMSLDEKEGN 239

Query: 251 ADGSDEESEN----------KLDVFREHASKIIQTVYSGAVEALPSSMNLRKRFLELLGN 102
               D E ++          K+DVFRE  S ++QT+YSGAVEALPSS +LRKRFLE+L  
Sbjct: 240 EKEEDGEEDSNVEDAEDVTEKVDVFREKGSNVLQTIYSGAVEALPSSFDLRKRFLEILEA 299

Query: 101 LDLTDSDNLREEILNGMRKDFAKFPEYWDWLSR 3
            DL  SD +R  IL+ +++DF K PEYW+WL+R
Sbjct: 300 TDLAHSDEIRNTILSDLKRDFCKEPEYWNWLAR 332


>ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Glycine max]
          Length = 649

 Score =  404 bits (1039), Expect = e-110
 Identities = 201/331 (60%), Positives = 251/331 (75%), Gaps = 8/331 (2%)
 Frame = -3

Query: 971 MADIVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 792
           MAD+VQYRLE+MVDELDDLE++G+F+R EI EIVK+RR FEY+LKRPSPLKQDFL+++EY
Sbjct: 1   MADVVQYRLERMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPSPLKQDFLAYVEY 60

Query: 791 EKQLDTXXXXXXXXXXXXL---GNKKIKRSVSDTSCVVRILRVFRLVTMRFKGDVGLWYQ 621
           E QLD             L   GNKK+K+S SD + ++RI+ ++ L   R+KGD+ LW+ 
Sbjct: 61  ETQLDALRRLRKKSVARELMKQGNKKLKKSKSDFAGLLRIMDIYELALKRYKGDIDLWFC 120

Query: 620 YLEFCRQHGHGRMKTVLAQVLRFHPNVPGLWMYAAGWEFDHNLNVASARNLMQRGLRACP 441
           YLEFCR   +GRMK  LA V+RFHP VPG+W+YAA WEFDHNLNVA+AR LMQ GLR CP
Sbjct: 121 YLEFCRLRKNGRMKKALANVIRFHPKVPGVWIYAAAWEFDHNLNVAAARALMQEGLRVCP 180

Query: 440 NSEDLWVEYLRMELVYLNKLKARKSLLGEDKGLLTRDNKDSDDERWEDENKDLFMAL--- 270
            SEDLWVEYLRMEL YLNKLKARK  LGED+G LTRD + SD++ W DEN +LFM L   
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDQGTLTRDPRSSDEKHWRDENSELFMPLGKR 240

Query: 269 --DEGKTNADGSDEESENKLDVFREHASKIIQTVYSGAVEALPSSMNLRKRFLELLGNLD 96
             D+G  N  GSD ESE K ++F EH   I QTVYSGAVEA+PSS++LRKR  E+L   +
Sbjct: 241 GDDDGGANV-GSD-ESEKKQELFEEHGMNIFQTVYSGAVEAVPSSLSLRKRLFEILEGTN 298

Query: 95  LTDSDNLREEILNGMRKDFAKFPEYWDWLSR 3
           L+  +++ +EILN M++DF+  PE+WDWL+R
Sbjct: 299 LSHYEDMCKEILNDMKRDFSTQPEFWDWLAR 329


>ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Glycine max]
          Length = 655

 Score =  403 bits (1036), Expect = e-110
 Identities = 197/333 (59%), Positives = 251/333 (75%), Gaps = 10/333 (3%)
 Frame = -3

Query: 971 MADIVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 792
           MAD+VQYRLE+MVDELDDLE++G+F+R EI EIVK+RR FEY+LKRPSPLK+DFL+++EY
Sbjct: 1   MADVVQYRLERMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPSPLKEDFLAYVEY 60

Query: 791 EKQLDTXXXXXXXXXXXXL---GNKKIKRSVSDTSCVVRILRVFRLVTMRFKGDVGLWYQ 621
           E QLD             L   GNKK+K+S SD + ++RI+ ++ L   R+KGD+ LW++
Sbjct: 61  ETQLDALRRLRKKSVARELMKQGNKKLKKSKSDFAGLLRIMDIYELALKRYKGDIDLWFR 120

Query: 620 YLEFCRQHGHGRMKTVLAQVLRFHPNVPGLWMYAAGWEFDHNLNVASARNLMQRGLRACP 441
           YLEFCR   +GRMK  LA V+RFHP VPG+W+YAA WEFDHNLNVA+AR LMQ GLR CP
Sbjct: 121 YLEFCRLRKNGRMKKALANVIRFHPKVPGIWIYAAAWEFDHNLNVAAARALMQEGLRVCP 180

Query: 440 NSEDLWVEYLRMELVYLNKLKARKSLLGEDKGLLTRDNKDSDDERWEDENKDLFMALDEG 261
            SEDLWVEYLRMEL YLNKLKARK  LGED+G LTRD + SD++ W DEN +LFM L E 
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDQGTLTRDPRSSDEKHWRDENSELFMPLGE- 239

Query: 260 KTNADGSD-------EESENKLDVFREHASKIIQTVYSGAVEALPSSMNLRKRFLELLGN 102
           + + DG D       +ESE K ++F E    I QTVY GAVEA+PSS++LRKRF E+L  
Sbjct: 240 RGDGDGDDDRANVGSDESEKKQELFEERGMNIFQTVYGGAVEAVPSSLSLRKRFFEILEG 299

Query: 101 LDLTDSDNLREEILNGMRKDFAKFPEYWDWLSR 3
            +L+  +++ +EILN M++DF+  PE+WDWL+R
Sbjct: 300 TNLSHYEDMCKEILNDMKRDFSTQPEFWDWLAR 332