BLASTX nr result
ID: Coptis25_contig00024542
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024542 (1024 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002518458.1| hepatocellular carcinoma-associated antigen,... 415 e-114 ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated... 411 e-112 ref|XP_002867461.1| hypothetical protein ARALYDRAFT_913702 [Arab... 410 e-112 ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated... 404 e-110 ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated... 403 e-110 >ref|XP_002518458.1| hepatocellular carcinoma-associated antigen, putative [Ricinus communis] gi|223542303|gb|EEF43845.1| hepatocellular carcinoma-associated antigen, putative [Ricinus communis] Length = 652 Score = 415 bits (1067), Expect = e-114 Identities = 199/326 (61%), Positives = 249/326 (76%), Gaps = 3/326 (0%) Frame = -3 Query: 971 MADIVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 792 MAD VQYRLE+MVDELDDLE++G FT EI EIVK+RR FEY+LKRPSPLKQD+L++IEY Sbjct: 1 MADTVQYRLERMVDELDDLERRGFFTHQEIAEIVKQRRKFEYRLKRPSPLKQDYLAYIEY 60 Query: 791 EKQLDTXXXXXXXXXXXXL---GNKKIKRSVSDTSCVVRILRVFRLVTMRFKGDVGLWYQ 621 E QLDT L GNKK+K SVSD + V RI+ ++RL R+KGD+ LW++ Sbjct: 61 ETQLDTLRRLRKKSVARDLKEKGNKKMKMSVSDFAGVSRIVDIYRLAVTRYKGDIDLWFR 120 Query: 620 YLEFCRQHGHGRMKTVLAQVLRFHPNVPGLWMYAAGWEFDHNLNVASARNLMQRGLRACP 441 YLEFCR +GRMK VLAQ++RFHP VPG+W+YAA WEFDHNLNVA+AR LMQ GLR CP Sbjct: 121 YLEFCRARRNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNLNVAAARALMQSGLRVCP 180 Query: 440 NSEDLWVEYLRMELVYLNKLKARKSLLGEDKGLLTRDNKDSDDERWEDENKDLFMALDEG 261 NSEDLW+EYLRMEL YLNKLKARK LGED G L RD++D+D++ W DEN +FM+LDE Sbjct: 181 NSEDLWIEYLRMELTYLNKLKARKVALGEDTGTLLRDHRDADEQHWRDENNGMFMSLDEE 240 Query: 260 KTNADGSDEESENKLDVFREHASKIIQTVYSGAVEALPSSMNLRKRFLELLGNLDLTDSD 81 + N +G + E+K D+FRE I+QT+YSGA+EALPSS LRKR E+ +L S+ Sbjct: 241 RGNNNGINVSVEDKADLFREQGLNILQTIYSGAIEALPSSFGLRKRLFEIFEATELAHSE 300 Query: 80 NLREEILNGMRKDFAKFPEYWDWLSR 3 ++R ++LN M++DF+ EYWDWL+R Sbjct: 301 DMRNQLLNDMKRDFSSDSEYWDWLAR 326 >ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Vitis vinifera] gi|302144122|emb|CBI23227.3| unnamed protein product [Vitis vinifera] Length = 652 Score = 411 bits (1056), Expect = e-112 Identities = 196/326 (60%), Positives = 256/326 (78%), Gaps = 3/326 (0%) Frame = -3 Query: 971 MADIVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 792 MAD+VQYRLE+MV+ELDDLE++G+F+R EI EIVK+RR FEY+LKRPSPLKQD+L++IEY Sbjct: 1 MADVVQYRLERMVNELDDLERRGVFSRREIAEIVKQRRKFEYRLKRPSPLKQDYLAYIEY 60 Query: 791 EKQLDTXXXXXXXXXXXXLGNKKIKRSVSDTSCVVRILRVFRLVTMRFKGDVGLWYQYLE 612 EKQLD+ KK K+SVSD + V RIL +++L MR+KGD+ LW++YLE Sbjct: 61 EKQLDSLRRLRKKSVARE-AKKKTKKSVSDFAGVSRILEIYQLAVMRYKGDIDLWFRYLE 119 Query: 611 FCRQHGHGRMKTVLAQVLRFHPNVPGLWMYAAGWEFDHNLNVASARNLMQRGLRACPNSE 432 FCR+ +GRMK VLAQV+RFHP VPG+W+YAA WEFDHNLN +AR LMQ GLR CP SE Sbjct: 120 FCRERRNGRMKKVLAQVIRFHPKVPGVWIYAAAWEFDHNLNATAARALMQSGLRVCPTSE 179 Query: 431 DLWVEYLRMELVYLNKLKARKSLLGEDKGLLTRDNKDSDDERWEDENKDLFMALDEGKTN 252 DLWVEYLRMEL YLNKLKARK LGED+G L D++D+D+++W +ENKDLFM+LDE + + Sbjct: 180 DLWVEYLRMELTYLNKLKARKVALGEDEGTLINDHRDADEKQWREENKDLFMSLDEERGS 239 Query: 251 ADGS---DEESENKLDVFREHASKIIQTVYSGAVEALPSSMNLRKRFLELLGNLDLTDSD 81 D S +EES+ K D+F+E I++T+YSGAVEA+PS +LR +F E+L ++L S Sbjct: 240 RDVSNRQNEESKKKSDMFQEQGLSILRTIYSGAVEAIPSRFSLRTQFFEILEAINLAGSK 299 Query: 80 NLREEILNGMRKDFAKFPEYWDWLSR 3 +++EIL+ M++DF+ PEYWDWL+R Sbjct: 300 EMQKEILSDMKRDFSAEPEYWDWLAR 325 >ref|XP_002867461.1| hypothetical protein ARALYDRAFT_913702 [Arabidopsis lyrata subsp. lyrata] gi|297313297|gb|EFH43720.1| hypothetical protein ARALYDRAFT_913702 [Arabidopsis lyrata subsp. lyrata] Length = 652 Score = 410 bits (1055), Expect = e-112 Identities = 200/333 (60%), Positives = 249/333 (74%), Gaps = 10/333 (3%) Frame = -3 Query: 971 MADIVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 792 MAD+VQYRLE+MVDELDDLE++GIFTR EI EIVK+RR FEY+LKRPSPLK+DF+++I+Y Sbjct: 1 MADVVQYRLERMVDELDDLERRGIFTRAEIAEIVKQRRKFEYRLKRPSPLKEDFIAYIDY 60 Query: 791 EKQLDTXXXXXXXXXXXXLGNKKIKRSVSDTSCVVRILRVFRLVTMRFKGDVGLWYQYLE 612 E +LD +K K+SVSD + V RI+ ++RL TMR+KGD+ LW++YLE Sbjct: 61 EVKLDELRQLRRKAVAYESKKRK-KKSVSDYAGVARIVEIYRLATMRYKGDINLWFRYLE 119 Query: 611 FCRQHGHGRMKTVLAQVLRFHPNVPGLWMYAAGWEFDHNLNVASARNLMQRGLRACPNSE 432 FC+Q HGRMK LAQ +RFHP V G+W+YAA WEFD NLNV +AR LM GLR C NSE Sbjct: 120 FCKQKRHGRMKKALAQAIRFHPKVAGVWIYAASWEFDRNLNVTAARALMLNGLRVCSNSE 179 Query: 431 DLWVEYLRMELVYLNKLKARKSLLGEDKGLLTRDNKDSDDERWEDENKDLFMALDEGKTN 252 DLWVEYLRMEL YLNKLKAR+ LGE KG L RD K +DE+W+DENK+LFM+LDE + N Sbjct: 180 DLWVEYLRMELTYLNKLKARRVALGESKGSLVRDTKSVEDEKWKDENKELFMSLDEKEGN 239 Query: 251 ADGSDEESEN----------KLDVFREHASKIIQTVYSGAVEALPSSMNLRKRFLELLGN 102 D E ++ K+DVFRE S ++QT+YSGAVEALPSS +LRKRFLE+L Sbjct: 240 EKEEDGEEDSNVEDAEDVTEKVDVFREKGSNVLQTIYSGAVEALPSSFDLRKRFLEILEA 299 Query: 101 LDLTDSDNLREEILNGMRKDFAKFPEYWDWLSR 3 DL SD +R IL+ +++DF K PEYW+WL+R Sbjct: 300 TDLAHSDEIRNTILSDLKRDFCKEPEYWNWLAR 332 >ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Glycine max] Length = 649 Score = 404 bits (1039), Expect = e-110 Identities = 201/331 (60%), Positives = 251/331 (75%), Gaps = 8/331 (2%) Frame = -3 Query: 971 MADIVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 792 MAD+VQYRLE+MVDELDDLE++G+F+R EI EIVK+RR FEY+LKRPSPLKQDFL+++EY Sbjct: 1 MADVVQYRLERMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPSPLKQDFLAYVEY 60 Query: 791 EKQLDTXXXXXXXXXXXXL---GNKKIKRSVSDTSCVVRILRVFRLVTMRFKGDVGLWYQ 621 E QLD L GNKK+K+S SD + ++RI+ ++ L R+KGD+ LW+ Sbjct: 61 ETQLDALRRLRKKSVARELMKQGNKKLKKSKSDFAGLLRIMDIYELALKRYKGDIDLWFC 120 Query: 620 YLEFCRQHGHGRMKTVLAQVLRFHPNVPGLWMYAAGWEFDHNLNVASARNLMQRGLRACP 441 YLEFCR +GRMK LA V+RFHP VPG+W+YAA WEFDHNLNVA+AR LMQ GLR CP Sbjct: 121 YLEFCRLRKNGRMKKALANVIRFHPKVPGVWIYAAAWEFDHNLNVAAARALMQEGLRVCP 180 Query: 440 NSEDLWVEYLRMELVYLNKLKARKSLLGEDKGLLTRDNKDSDDERWEDENKDLFMAL--- 270 SEDLWVEYLRMEL YLNKLKARK LGED+G LTRD + SD++ W DEN +LFM L Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDQGTLTRDPRSSDEKHWRDENSELFMPLGKR 240 Query: 269 --DEGKTNADGSDEESENKLDVFREHASKIIQTVYSGAVEALPSSMNLRKRFLELLGNLD 96 D+G N GSD ESE K ++F EH I QTVYSGAVEA+PSS++LRKR E+L + Sbjct: 241 GDDDGGANV-GSD-ESEKKQELFEEHGMNIFQTVYSGAVEAVPSSLSLRKRLFEILEGTN 298 Query: 95 LTDSDNLREEILNGMRKDFAKFPEYWDWLSR 3 L+ +++ +EILN M++DF+ PE+WDWL+R Sbjct: 299 LSHYEDMCKEILNDMKRDFSTQPEFWDWLAR 329 >ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Glycine max] Length = 655 Score = 403 bits (1036), Expect = e-110 Identities = 197/333 (59%), Positives = 251/333 (75%), Gaps = 10/333 (3%) Frame = -3 Query: 971 MADIVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 792 MAD+VQYRLE+MVDELDDLE++G+F+R EI EIVK+RR FEY+LKRPSPLK+DFL+++EY Sbjct: 1 MADVVQYRLERMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPSPLKEDFLAYVEY 60 Query: 791 EKQLDTXXXXXXXXXXXXL---GNKKIKRSVSDTSCVVRILRVFRLVTMRFKGDVGLWYQ 621 E QLD L GNKK+K+S SD + ++RI+ ++ L R+KGD+ LW++ Sbjct: 61 ETQLDALRRLRKKSVARELMKQGNKKLKKSKSDFAGLLRIMDIYELALKRYKGDIDLWFR 120 Query: 620 YLEFCRQHGHGRMKTVLAQVLRFHPNVPGLWMYAAGWEFDHNLNVASARNLMQRGLRACP 441 YLEFCR +GRMK LA V+RFHP VPG+W+YAA WEFDHNLNVA+AR LMQ GLR CP Sbjct: 121 YLEFCRLRKNGRMKKALANVIRFHPKVPGIWIYAAAWEFDHNLNVAAARALMQEGLRVCP 180 Query: 440 NSEDLWVEYLRMELVYLNKLKARKSLLGEDKGLLTRDNKDSDDERWEDENKDLFMALDEG 261 SEDLWVEYLRMEL YLNKLKARK LGED+G LTRD + SD++ W DEN +LFM L E Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDQGTLTRDPRSSDEKHWRDENSELFMPLGE- 239 Query: 260 KTNADGSD-------EESENKLDVFREHASKIIQTVYSGAVEALPSSMNLRKRFLELLGN 102 + + DG D +ESE K ++F E I QTVY GAVEA+PSS++LRKRF E+L Sbjct: 240 RGDGDGDDDRANVGSDESEKKQELFEERGMNIFQTVYGGAVEAVPSSLSLRKRFFEILEG 299 Query: 101 LDLTDSDNLREEILNGMRKDFAKFPEYWDWLSR 3 +L+ +++ +EILN M++DF+ PE+WDWL+R Sbjct: 300 TNLSHYEDMCKEILNDMKRDFSTQPEFWDWLAR 332