BLASTX nr result

ID: Coptis25_contig00024539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024539
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_188633.1| uncharacterized protein [Arabidopsis thaliana] ...   167   6e-40
ref|XP_002883220.1| binding protein [Arabidopsis lyrata subsp. l...   167   6e-40
dbj|BAB03164.1| unnamed protein product [Arabidopsis thaliana]        167   6e-40
dbj|BAE99597.1| hypothetical protein [Arabidopsis thaliana]           166   1e-39
ref|XP_002513137.1| conserved hypothetical protein [Ricinus comm...   162   2e-38

>ref|NP_188633.1| uncharacterized protein [Arabidopsis thaliana]
           gi|63003792|gb|AAY25425.1| At3g19990 [Arabidopsis
           thaliana] gi|111074436|gb|ABH04591.1| At3g19990
           [Arabidopsis thaliana] gi|332642795|gb|AEE76316.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 425

 Score =  167 bits (424), Expect = 6e-40
 Identities = 75/88 (85%), Positives = 85/88 (96%)
 Frame = +1

Query: 76  ILEAARPFLRGELETIDPKLPALVSVLRSVGAGECWHKHGSFLDHLVDIYRILKLWNSPD 255
           +LE+ARPFLRGELE IDPKLP+L++VL+SVGAGECWHKHGSFLDHL+DIY+ILKLW +P+
Sbjct: 13  VLESARPFLRGELEKIDPKLPSLIAVLKSVGAGECWHKHGSFLDHLIDIYKILKLWKAPE 72

Query: 256 SVSLCGLFHSAYSNSYVNLAIFDPSTGR 339
           SV LCGLFHSAYSNSYVNLAIFDPSTGR
Sbjct: 73  SVCLCGLFHSAYSNSYVNLAIFDPSTGR 100


>ref|XP_002883220.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329060|gb|EFH59479.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 425

 Score =  167 bits (424), Expect = 6e-40
 Identities = 75/88 (85%), Positives = 85/88 (96%)
 Frame = +1

Query: 76  ILEAARPFLRGELETIDPKLPALVSVLRSVGAGECWHKHGSFLDHLVDIYRILKLWNSPD 255
           +LE+ARPFLRGELE IDPKLP+L++VL+SVGAGECWHKHGSFLDHL+DIY+ILKLW +P+
Sbjct: 13  VLESARPFLRGELEKIDPKLPSLIAVLKSVGAGECWHKHGSFLDHLIDIYKILKLWKAPE 72

Query: 256 SVSLCGLFHSAYSNSYVNLAIFDPSTGR 339
           SV LCGLFHSAYSNSYVNLAIFDPSTGR
Sbjct: 73  SVCLCGLFHSAYSNSYVNLAIFDPSTGR 100


>dbj|BAB03164.1| unnamed protein product [Arabidopsis thaliana]
          Length = 450

 Score =  167 bits (424), Expect = 6e-40
 Identities = 75/88 (85%), Positives = 85/88 (96%)
 Frame = +1

Query: 76  ILEAARPFLRGELETIDPKLPALVSVLRSVGAGECWHKHGSFLDHLVDIYRILKLWNSPD 255
           +LE+ARPFLRGELE IDPKLP+L++VL+SVGAGECWHKHGSFLDHL+DIY+ILKLW +P+
Sbjct: 38  VLESARPFLRGELEKIDPKLPSLIAVLKSVGAGECWHKHGSFLDHLIDIYKILKLWKAPE 97

Query: 256 SVSLCGLFHSAYSNSYVNLAIFDPSTGR 339
           SV LCGLFHSAYSNSYVNLAIFDPSTGR
Sbjct: 98  SVCLCGLFHSAYSNSYVNLAIFDPSTGR 125


>dbj|BAE99597.1| hypothetical protein [Arabidopsis thaliana]
          Length = 412

 Score =  166 bits (421), Expect = 1e-39
 Identities = 75/87 (86%), Positives = 84/87 (96%)
 Frame = +1

Query: 79  LEAARPFLRGELETIDPKLPALVSVLRSVGAGECWHKHGSFLDHLVDIYRILKLWNSPDS 258
           LE+ARPFLRGELE IDPKLP+L++VL+SVGAGECWHKHGSFLDHL+DIY+ILKLW +P+S
Sbjct: 1   LESARPFLRGELEKIDPKLPSLIAVLKSVGAGECWHKHGSFLDHLIDIYKILKLWKAPES 60

Query: 259 VSLCGLFHSAYSNSYVNLAIFDPSTGR 339
           V LCGLFHSAYSNSYVNLAIFDPSTGR
Sbjct: 61  VCLCGLFHSAYSNSYVNLAIFDPSTGR 87


>ref|XP_002513137.1| conserved hypothetical protein [Ricinus communis]
           gi|223548148|gb|EEF49640.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 424

 Score =  162 bits (411), Expect = 2e-38
 Identities = 74/88 (84%), Positives = 82/88 (93%)
 Frame = +1

Query: 76  ILEAARPFLRGELETIDPKLPALVSVLRSVGAGECWHKHGSFLDHLVDIYRILKLWNSPD 255
           +L + RPFLRGELE++D  LPAL+SVLRSVGAGECWHKHGSFLDHLVDIYRILK+WN+ D
Sbjct: 16  LLASTRPFLRGELESVDKNLPALISVLRSVGAGECWHKHGSFLDHLVDIYRILKIWNASD 75

Query: 256 SVSLCGLFHSAYSNSYVNLAIFDPSTGR 339
           SV LCGLFHSAYSNSYVNLAIFDP+TGR
Sbjct: 76  SVCLCGLFHSAYSNSYVNLAIFDPNTGR 103


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