BLASTX nr result

ID: Coptis25_contig00024534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024534
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE75665.1| hypothetical protein [Gossypium hirsutum]              69   4e-10
ref|XP_004135715.1| PREDICTED: UPF0197 transmembrane protein C11...    69   5e-10
emb|CBI27908.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002282032.1| PREDICTED: UPF0197 transmembrane protein C11...    67   2e-09
ref|XP_002331450.1| predicted protein [Populus trichocarpa] gi|1...    64   1e-08

>emb|CAE75665.1| hypothetical protein [Gossypium hirsutum]
          Length = 78

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/42 (73%), Positives = 40/42 (95%)
 Frame = +3

Query: 105 AKPITSPIAVAYYPSLAVVMIGIGLIVTASFFIYEATSSKKN 230
           AKPITSP++ A+YP+LA++M+ IGL+VTASFFIYEATSSK+N
Sbjct: 5   AKPITSPVSDAWYPTLALLMLSIGLVVTASFFIYEATSSKRN 46


>ref|XP_004135715.1| PREDICTED: UPF0197 transmembrane protein C11orf10-like [Cucumis
           sativus] gi|449489875|ref|XP_004158446.1| PREDICTED:
           UPF0197 transmembrane protein C11orf10-like [Cucumis
           sativus]
          Length = 76

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/41 (75%), Positives = 38/41 (92%)
 Frame = +3

Query: 108 KPITSPIAVAYYPSLAVVMIGIGLIVTASFFIYEATSSKKN 230
           KP+TSP+  A+YP+LAV+MI +GLIVTASFFIYEATSS+KN
Sbjct: 4   KPVTSPVPEAWYPTLAVLMISVGLIVTASFFIYEATSSRKN 44


>emb|CBI27908.3| unnamed protein product [Vitis vinifera]
          Length = 128

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/42 (69%), Positives = 39/42 (92%)
 Frame = +3

Query: 105 AKPITSPIAVAYYPSLAVVMIGIGLIVTASFFIYEATSSKKN 230
           AKPITSP+  A+YP+LAV+M+ +GL++TASFFIYEATSS+K+
Sbjct: 55  AKPITSPVPDAWYPTLAVLMLAVGLVITASFFIYEATSSRKS 96


>ref|XP_002282032.1| PREDICTED: UPF0197 transmembrane protein C11orf10-like [Vitis
           vinifera]
          Length = 78

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/42 (69%), Positives = 39/42 (92%)
 Frame = +3

Query: 105 AKPITSPIAVAYYPSLAVVMIGIGLIVTASFFIYEATSSKKN 230
           AKPITSP+  A+YP+LAV+M+ +GL++TASFFIYEATSS+K+
Sbjct: 5   AKPITSPVPDAWYPTLAVLMLAVGLVITASFFIYEATSSRKS 46


>ref|XP_002331450.1| predicted protein [Populus trichocarpa] gi|118485469|gb|ABK94590.1|
           unknown [Populus trichocarpa]
           gi|222873528|gb|EEF10659.1| predicted protein [Populus
           trichocarpa]
          Length = 78

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/46 (67%), Positives = 39/46 (84%)
 Frame = +3

Query: 93  MTFEAKPITSPIAVAYYPSLAVVMIGIGLIVTASFFIYEATSSKKN 230
           M  +A  I+SP+ VA+YP+LAV M+ IGLIVTASFFIYEATSS++N
Sbjct: 1   MGSKAAAISSPVPVAWYPTLAVFMLAIGLIVTASFFIYEATSSRRN 46


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