BLASTX nr result

ID: Coptis25_contig00024531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024531
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20806.3| unnamed protein product [Vitis vinifera]              100   2e-32
ref|XP_003631778.1| PREDICTED: U-box domain-containing protein 3...    92   7e-30
emb|CAN69465.1| hypothetical protein VITISV_023046 [Vitis vinifera]    92   7e-30
ref|XP_002518240.1| ATP binding protein, putative [Ricinus commu...    79   7e-26
gb|AAC17071.1| Similar to protein serine/threonine kinase NPK15 ...    81   6e-24

>emb|CBI20806.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score =  100 bits (250), Expect(2) = 2e-32
 Identities = 49/61 (80%), Positives = 53/61 (86%)
 Frame = -1

Query: 441 LREREREMWLSKGNAEKKEDGNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKL 262
           LRE  REMWL +GN EKKE GN LVAVAIDKDKGSQ ALKWAID+IL RGQ+V+LIHVKL
Sbjct: 398 LRESPREMWLGRGNTEKKEGGNPLVAVAIDKDKGSQSALKWAIDNILNRGQTVVLIHVKL 457

Query: 261 K 259
           K
Sbjct: 458 K 458



 Score = 63.5 bits (153), Expect(2) = 2e-32
 Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
 Frame = -2

Query: 164 FTYSLFYLLKC---SSQITCRDIVLEDIDVAKALIEYVSHSAIETLVVGASSKNG 9
           +T  LF   +C      I C+D++LED DV KALIEYVSHSAIE LVVGA +K G
Sbjct: 487 YTKELFLPFRCFCTRKDIQCKDVILEDTDVVKALIEYVSHSAIEVLVVGAPAKGG 541


>ref|XP_003631778.1| PREDICTED: U-box domain-containing protein 35-like [Vitis vinifera]
          Length = 796

 Score = 92.4 bits (228), Expect(2) = 7e-30
 Identities = 44/54 (81%), Positives = 48/54 (88%)
 Frame = -1

Query: 420 MWLSKGNAEKKEDGNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKLK 259
           MWL +GN EKKE GN LVAVAIDKDKGSQ ALKWAID+IL RGQ+V+LIHVKLK
Sbjct: 1   MWLGRGNTEKKEGGNPLVAVAIDKDKGSQSALKWAIDNILNRGQTVVLIHVKLK 54



 Score = 63.5 bits (153), Expect(2) = 7e-30
 Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
 Frame = -2

Query: 164 FTYSLFYLLKC---SSQITCRDIVLEDIDVAKALIEYVSHSAIETLVVGASSKNG 9
           +T  LF   +C      I C+D++LED DV KALIEYVSHSAIE LVVGA +K G
Sbjct: 73  YTKELFLPFRCFCTRKDIQCKDVILEDTDVVKALIEYVSHSAIEVLVVGAPAKGG 127


>emb|CAN69465.1| hypothetical protein VITISV_023046 [Vitis vinifera]
          Length = 768

 Score = 92.4 bits (228), Expect(2) = 7e-30
 Identities = 44/54 (81%), Positives = 48/54 (88%)
 Frame = -1

Query: 420 MWLSKGNAEKKEDGNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKLK 259
           MWL +GN EKKE GN LVAVAIDKDKGSQ ALKWAID+IL RGQ+V+LIHVKLK
Sbjct: 1   MWLGRGNTEKKEGGNPLVAVAIDKDKGSQSALKWAIDNILNRGQTVVLIHVKLK 54



 Score = 63.5 bits (153), Expect(2) = 7e-30
 Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
 Frame = -2

Query: 164 FTYSLFYLLKC---SSQITCRDIVLEDIDVAKALIEYVSHSAIETLVVGASSKNG 9
           +T  LF   +C      I C+D++LED DV KALIEYVSHSAIE LVVGA +K G
Sbjct: 73  YTKELFLPFRCFCTRKDIQCKDVILEDTDVVKALIEYVSHSAIEVLVVGAPAKGG 127


>ref|XP_002518240.1| ATP binding protein, putative [Ricinus communis]
           gi|223542587|gb|EEF44126.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 802

 Score = 79.3 bits (194), Expect(2) = 7e-26
 Identities = 38/60 (63%), Positives = 48/60 (80%), Gaps = 3/60 (5%)
 Frame = -1

Query: 420 MWLSKGNAEKKED---GNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKLKAMT 250
           MW+++   +K      GNGLVAVAIDKDK SQ ALKWAIDHIL +GQ+V+LIHVKLK+++
Sbjct: 1   MWMTRSQIDKSSSQGSGNGLVAVAIDKDKSSQSALKWAIDHILHKGQTVLLIHVKLKSIS 60



 Score = 63.2 bits (152), Expect(2) = 7e-26
 Identities = 31/56 (55%), Positives = 41/56 (73%), Gaps = 3/56 (5%)
 Frame = -2

Query: 161 TYSLFYLLKC---SSQITCRDIVLEDIDVAKALIEYVSHSAIETLVVGASSKNGLF 3
           T  LF   +C      I C+D+VLE+ D+AKAL+EY + +AIETLVVGAS+K+GLF
Sbjct: 93  TKELFLPFRCFCTRKDIQCKDVVLEETDIAKALVEYATRTAIETLVVGASNKSGLF 148


>gb|AAC17071.1| Similar to protein serine/threonine kinase NPK15 gb|D31737 from
           Nicotiana tabacum [Arabidopsis thaliana]
          Length = 772

 Score = 80.9 bits (198), Expect(2) = 6e-24
 Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
 Frame = -1

Query: 420 MWLSKGNAEKKEDGNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKLKAMTS-- 247
           MWL K N  KKE G+G VAVAIDKDKGSQHALKW ID++  RGQ++ LIHV  ++ +S  
Sbjct: 1   MWLPKANGAKKETGSGSVAVAIDKDKGSQHALKWTIDNLASRGQTISLIHVLCRSHSSSD 60

Query: 246 -VAGTPSK 226
              GTP +
Sbjct: 61  LEEGTPQQ 68



 Score = 55.1 bits (131), Expect(2) = 6e-24
 Identities = 27/43 (62%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
 Frame = -2

Query: 134 CS-SQITCRDIVLEDIDVAKALIEYVSHSAIETLVVGASSKNG 9
           CS  +I CRDI+LED D  +A+ EYVS SAIE LVVG++S+NG
Sbjct: 87  CSRKEINCRDILLEDADKVRAITEYVSSSAIENLVVGSASRNG 129


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