BLASTX nr result
ID: Coptis25_contig00024531
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024531 (555 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI20806.3| unnamed protein product [Vitis vinifera] 100 2e-32 ref|XP_003631778.1| PREDICTED: U-box domain-containing protein 3... 92 7e-30 emb|CAN69465.1| hypothetical protein VITISV_023046 [Vitis vinifera] 92 7e-30 ref|XP_002518240.1| ATP binding protein, putative [Ricinus commu... 79 7e-26 gb|AAC17071.1| Similar to protein serine/threonine kinase NPK15 ... 81 6e-24 >emb|CBI20806.3| unnamed protein product [Vitis vinifera] Length = 1126 Score = 100 bits (250), Expect(2) = 2e-32 Identities = 49/61 (80%), Positives = 53/61 (86%) Frame = -1 Query: 441 LREREREMWLSKGNAEKKEDGNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKL 262 LRE REMWL +GN EKKE GN LVAVAIDKDKGSQ ALKWAID+IL RGQ+V+LIHVKL Sbjct: 398 LRESPREMWLGRGNTEKKEGGNPLVAVAIDKDKGSQSALKWAIDNILNRGQTVVLIHVKL 457 Query: 261 K 259 K Sbjct: 458 K 458 Score = 63.5 bits (153), Expect(2) = 2e-32 Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 3/55 (5%) Frame = -2 Query: 164 FTYSLFYLLKC---SSQITCRDIVLEDIDVAKALIEYVSHSAIETLVVGASSKNG 9 +T LF +C I C+D++LED DV KALIEYVSHSAIE LVVGA +K G Sbjct: 487 YTKELFLPFRCFCTRKDIQCKDVILEDTDVVKALIEYVSHSAIEVLVVGAPAKGG 541 >ref|XP_003631778.1| PREDICTED: U-box domain-containing protein 35-like [Vitis vinifera] Length = 796 Score = 92.4 bits (228), Expect(2) = 7e-30 Identities = 44/54 (81%), Positives = 48/54 (88%) Frame = -1 Query: 420 MWLSKGNAEKKEDGNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKLK 259 MWL +GN EKKE GN LVAVAIDKDKGSQ ALKWAID+IL RGQ+V+LIHVKLK Sbjct: 1 MWLGRGNTEKKEGGNPLVAVAIDKDKGSQSALKWAIDNILNRGQTVVLIHVKLK 54 Score = 63.5 bits (153), Expect(2) = 7e-30 Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 3/55 (5%) Frame = -2 Query: 164 FTYSLFYLLKC---SSQITCRDIVLEDIDVAKALIEYVSHSAIETLVVGASSKNG 9 +T LF +C I C+D++LED DV KALIEYVSHSAIE LVVGA +K G Sbjct: 73 YTKELFLPFRCFCTRKDIQCKDVILEDTDVVKALIEYVSHSAIEVLVVGAPAKGG 127 >emb|CAN69465.1| hypothetical protein VITISV_023046 [Vitis vinifera] Length = 768 Score = 92.4 bits (228), Expect(2) = 7e-30 Identities = 44/54 (81%), Positives = 48/54 (88%) Frame = -1 Query: 420 MWLSKGNAEKKEDGNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKLK 259 MWL +GN EKKE GN LVAVAIDKDKGSQ ALKWAID+IL RGQ+V+LIHVKLK Sbjct: 1 MWLGRGNTEKKEGGNPLVAVAIDKDKGSQSALKWAIDNILNRGQTVVLIHVKLK 54 Score = 63.5 bits (153), Expect(2) = 7e-30 Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 3/55 (5%) Frame = -2 Query: 164 FTYSLFYLLKC---SSQITCRDIVLEDIDVAKALIEYVSHSAIETLVVGASSKNG 9 +T LF +C I C+D++LED DV KALIEYVSHSAIE LVVGA +K G Sbjct: 73 YTKELFLPFRCFCTRKDIQCKDVILEDTDVVKALIEYVSHSAIEVLVVGAPAKGG 127 >ref|XP_002518240.1| ATP binding protein, putative [Ricinus communis] gi|223542587|gb|EEF44126.1| ATP binding protein, putative [Ricinus communis] Length = 802 Score = 79.3 bits (194), Expect(2) = 7e-26 Identities = 38/60 (63%), Positives = 48/60 (80%), Gaps = 3/60 (5%) Frame = -1 Query: 420 MWLSKGNAEKKED---GNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKLKAMT 250 MW+++ +K GNGLVAVAIDKDK SQ ALKWAIDHIL +GQ+V+LIHVKLK+++ Sbjct: 1 MWMTRSQIDKSSSQGSGNGLVAVAIDKDKSSQSALKWAIDHILHKGQTVLLIHVKLKSIS 60 Score = 63.2 bits (152), Expect(2) = 7e-26 Identities = 31/56 (55%), Positives = 41/56 (73%), Gaps = 3/56 (5%) Frame = -2 Query: 161 TYSLFYLLKC---SSQITCRDIVLEDIDVAKALIEYVSHSAIETLVVGASSKNGLF 3 T LF +C I C+D+VLE+ D+AKAL+EY + +AIETLVVGAS+K+GLF Sbjct: 93 TKELFLPFRCFCTRKDIQCKDVVLEETDIAKALVEYATRTAIETLVVGASNKSGLF 148 >gb|AAC17071.1| Similar to protein serine/threonine kinase NPK15 gb|D31737 from Nicotiana tabacum [Arabidopsis thaliana] Length = 772 Score = 80.9 bits (198), Expect(2) = 6e-24 Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 3/68 (4%) Frame = -1 Query: 420 MWLSKGNAEKKEDGNGLVAVAIDKDKGSQHALKWAIDHILGRGQSVILIHVKLKAMTS-- 247 MWL K N KKE G+G VAVAIDKDKGSQHALKW ID++ RGQ++ LIHV ++ +S Sbjct: 1 MWLPKANGAKKETGSGSVAVAIDKDKGSQHALKWTIDNLASRGQTISLIHVLCRSHSSSD 60 Query: 246 -VAGTPSK 226 GTP + Sbjct: 61 LEEGTPQQ 68 Score = 55.1 bits (131), Expect(2) = 6e-24 Identities = 27/43 (62%), Positives = 34/43 (79%), Gaps = 1/43 (2%) Frame = -2 Query: 134 CS-SQITCRDIVLEDIDVAKALIEYVSHSAIETLVVGASSKNG 9 CS +I CRDI+LED D +A+ EYVS SAIE LVVG++S+NG Sbjct: 87 CSRKEINCRDILLEDADKVRAITEYVSSSAIENLVVGSASRNG 129