BLASTX nr result
ID: Coptis25_contig00024516
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00024516
(1467 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACI15345.1| NAC domain protein NAC4 [Gossypium hirsutum] gi|2... 55 8e-18
ref|XP_003539409.1| PREDICTED: NAC domain-containing protein 68-... 51 2e-17
ref|NP_567773.1| NAC domain-containing protein 72 [Arabidopsis t... 55 2e-17
ref|XP_003625606.1| NAC domain transcription factor [Medicago tr... 47 2e-17
gb|ADL36807.1| NAC domain class transcription factor [Malus x do... 54 3e-17
>gb|ACI15345.1| NAC domain protein NAC4 [Gossypium hirsutum]
gi|206584355|gb|ACI15350.1| NAC domain protein NAC4
[Gossypium hirsutum]
Length = 346
Score = 54.7 bits (130), Expect(3) = 8e-18
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = -2
Query: 1163 RKYKEGDRPDHEASNGYWKASGSKKELIDQDKRKVGLTRALVYYEGKKLK 1014
RKY G RP+ A +GYWKA+G+ K +I + RKVG+ +ALV+Y GK K
Sbjct: 78 RKYPNGSRPNRVAGSGYWKATGTDK-IITTEGRKVGIKKALVFYVGKAPK 126
Score = 45.4 bits (106), Expect(3) = 8e-18
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = -3
Query: 1339 IKYPPGFRYLPTGLQLIVPYLSNKLRDPHFKCTMITDANVYACHPQELVEKHRLNEED 1166
+ PPGFR+ PT +L+V YL K+ HF +I + ++Y +P +L K E++
Sbjct: 12 LSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIGEIDLYKFNPWDLPSKALFGEKE 69
Score = 37.7 bits (86), Expect(3) = 8e-18
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = -1
Query: 999 GKKTDWIMHELWIPKYQIPKNKQSNCMKLDDWVLYKIH 886
G KT+WIMHE + I +++S KLDDWVL +I+
Sbjct: 127 GTKTNWIMHEYRL----IETSRKSGSSKLDDWVLCRIY 160
>ref|XP_003539409.1| PREDICTED: NAC domain-containing protein 68-like [Glycine max]
Length = 349
Score = 50.8 bits (120), Expect(3) = 2e-17
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = -2
Query: 1163 RKYKEGDRPDHEASNGYWKASGSKKELIDQ-DKRKVGLTRALVYYEGKKLK 1014
RKY G RP+ A++GYWKA+G+ K ++ R++G+ +ALV+Y G+ K
Sbjct: 76 RKYPNGLRPNRAAASGYWKATGTDKPILSSCGSRRIGVKKALVFYSGRPPK 126
Score = 45.1 bits (105), Expect(3) = 2e-17
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = -3
Query: 1333 YPPGFRYLPTGLQLIVPYLSNKLRDPHFKCTMITDANVYACHPQELVEKHRLNEED 1166
+PPGFR+ P+ +LIV YL NK+ +I + ++Y +P EL K EE+
Sbjct: 12 FPPGFRFHPSDEELIVHYLENKVSSRPLPACIIAEIDLYKYNPWELPNKSLFGEEE 67
Score = 40.8 bits (94), Expect(3) = 2e-17
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = -1
Query: 999 GKKTDWIMHELWIPKYQIPKNKQSNCMKLDDWVLYKIHY 883
G KTDWIM+E + I ++ M+LDDWVL ++ Y
Sbjct: 127 GAKTDWIMNEYRLVDTTIKSSRLKGSMRLDDWVLCRVRY 165
>ref|NP_567773.1| NAC domain-containing protein 72 [Arabidopsis thaliana]
gi|75163205|sp|Q93VY3.1|NAC72_ARATH RecName: Full=NAC
domain-containing protein 72; Short=ANAC072; AltName:
Full=Protein RESPONSIVE TO DESICCATION 26
gi|16226943|gb|AAL16305.1|AF428375_1 AT4g27410/F27G19_10
[Arabidopsis thaliana] gi|15982729|gb|AAL09817.1| unknown
protein [Arabidopsis thaliana] gi|20259263|gb|AAM14367.1|
unknown protein [Arabidopsis thaliana]
gi|21593359|gb|AAM65308.1| unknown [Arabidopsis thaliana]
gi|24417372|gb|AAN60296.1| unknown [Arabidopsis thaliana]
gi|332659934|gb|AEE85334.1| NAC domain-containing protein
72 [Arabidopsis thaliana]
Length = 297
Score = 55.5 bits (132), Expect(3) = 2e-17
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = -2
Query: 1163 RKYKEGDRPDHEASNGYWKASGSKKELIDQDKRKVGLTRALVYYEGKKLK 1014
RKY G RP+ A +GYWKA+G+ K +I D R+VG+ +ALV+Y GK K
Sbjct: 78 RKYPNGSRPNRVAGSGYWKATGTDK-IITADGRRVGIKKALVFYAGKAPK 126
Score = 45.8 bits (107), Expect(3) = 2e-17
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = -3
Query: 1339 IKYPPGFRYLPTGLQLIVPYLSNKLRDPHFKCTMITDANVYACHPQELVEKHRLNEED 1166
+ PPGFR+ PT +L+V YL K+ HF +I D ++Y P +L K E++
Sbjct: 12 LSLPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKALFGEKE 69
Score = 35.4 bits (80), Expect(3) = 2e-17
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -1
Query: 999 GKKTDWIMHELWIPKYQIPKNKQSNCMKLDDWVLYKIH 886
G KT+WIMHE + I ++ KLDDWVL +I+
Sbjct: 127 GTKTNWIMHEYRL----IEHSRSHGSSKLDDWVLCRIY 160
>ref|XP_003625606.1| NAC domain transcription factor [Medicago truncatula]
gi|355500621|gb|AES81824.1| NAC domain transcription
factor [Medicago truncatula]
Length = 328
Score = 47.4 bits (111), Expect(3) = 2e-17
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = -3
Query: 1339 IKYPPGFRYLPTGLQLIVPYLSNKLRDPHFKCTMITDANVYACHPQELVEKHRLNEED 1166
I+ PPGFR+ P+ +LIV YL NK+ + I + N+Y +P EL K EE+
Sbjct: 9 IQLPPGFRFHPSDEELIVHYLRNKVTSSPLPASFIAEINLYKYNPWELPSKALFGEEE 66
Score = 46.6 bits (109), Expect(3) = 2e-17
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = -2
Query: 1163 RKYKEGDRPDHEASNGYWKASGSKKELIDQ-DKRKVGLTRALVYYEGKKLK 1014
RKY +G RP+ A GYWKA+G+ K ++ + +G+ +ALV+Y+G+ K
Sbjct: 75 RKYPKGLRPNRAAGVGYWKATGTDKPILTSCGLKSIGVKKALVFYKGRPPK 125
Score = 42.4 bits (98), Expect(3) = 2e-17
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = -1
Query: 999 GKKTDWIMHELWIPKYQIPKNKQSNCMKLDDWVLYKIHYNITRDKSKRQEGSD 841
G KT+WIMHE + I + S M+LD+WVL ++ + +S ++ ++
Sbjct: 126 GSKTEWIMHEYRLHDSMISNSNHSGSMRLDEWVLCRVRQKMGSPRSSWEDSNE 178
>gb|ADL36807.1| NAC domain class transcription factor [Malus x domestica]
Length = 364
Score = 53.5 bits (127), Expect(3) = 3e-17
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = -2
Query: 1163 RKYKEGDRPDHEASNGYWKASGSKKELIDQ-DKRKVGLTRALVYYEGKKLK 1014
RKY G RP+ A++GYWKA+G+ K ++ D +KVG+ +ALV+Y GK K
Sbjct: 89 RKYPNGARPNRAATSGYWKATGTDKPVLTSGDTQKVGVKKALVFYGGKPPK 139
Score = 41.6 bits (96), Expect(3) = 3e-17
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Frame = -1
Query: 1011 KDNPGKKTDWIMHELWIPKYQIPKNKQSNC--------MKLDDWVLYKIHYNITRDKSKR 856
K G KT+WIMHE + + P NK C M+LDDWVL +I+ +
Sbjct: 136 KPPKGIKTNWIMHEYRLADNK-PNNKPPGCDLGNKKNSMRLDDWVLCRIYKKNNTHRPMD 194
Query: 855 QEGSDNEDDVV 823
E D+ +D++
Sbjct: 195 HEREDSMEDIM 205
Score = 40.8 bits (94), Expect(3) = 3e-17
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = -3
Query: 1345 PVIKYPPGFRYLPTGLQLIVPYLSNKLRDPHFKCTMITDANVYACHPQELVEKHRLNEED 1166
P PPGFR+ PT +L+V YL K +I + ++Y P EL K E++
Sbjct: 21 PQPNLPPGFRFHPTDEELVVHYLKKKATSAPLPVAIIAEVDLYKFDPWELPAKATFGEQE 80