BLASTX nr result

ID: Coptis25_contig00024511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024511
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550486.1| PREDICTED: ankyrin repeat domain-containing ...   154   7e-36
ref|XP_002305567.1| predicted protein [Populus trichocarpa] gi|2...   151   5e-35
ref|XP_002316534.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002273433.1| PREDICTED: ankyrin repeat domain-containing ...   148   4e-34
ref|XP_002518472.1| protein binding protein, putative [Ricinus c...   144   1e-32

>ref|XP_003550486.1| PREDICTED: ankyrin repeat domain-containing protein 13B-like
           [Glycine max]
          Length = 703

 Score =  154 bits (389), Expect = 7e-36
 Identities = 88/148 (59%), Positives = 98/148 (66%)
 Frame = +2

Query: 41  GFLVAENPRFSTSSFETRRHSSFVREERDFVLSNGRKSLDVKQPLPLMAADKRRVAALPL 220
           GFLVAENP F     + RRHSSFVREE ++V   GRKSLD    L  + A + R   +P 
Sbjct: 333 GFLVAENPNFGFPMPDKRRHSSFVREETEWV-PMGRKSLD----LTSVTAPQPRSVTMPT 387

Query: 221 EKKEKEYVKNLRPSVWLTEQFPLKTEDLLPLLDILANKVKAVRRLRELLTTKFPPGXXXX 400
           + KEKEYV++LRPSVWLTEQFPLKTE+LLPLLDILANKVKAVRRLRELLTT FPPG    
Sbjct: 388 QTKEKEYVRSLRPSVWLTEQFPLKTEELLPLLDILANKVKAVRRLRELLTTTFPPGTFPV 447

Query: 401 XXXXXXXXXXXXXXXXXXXXELQPLEQF 484
                               ELQPLEQF
Sbjct: 448 KVAIPVVPTVRVVITFTKFVELQPLEQF 475


>ref|XP_002305567.1| predicted protein [Populus trichocarpa] gi|222848531|gb|EEE86078.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score =  151 bits (382), Expect = 5e-35
 Identities = 88/153 (57%), Positives = 101/153 (66%), Gaps = 5/153 (3%)
 Frame = +2

Query: 41  GFLVAENPRFSTSSFET-----RRHSSFVREERDFVLSNGRKSLDVKQPLPLMAADKRRV 205
           GFLVAENP F    F       RRHSSFVREER+FV S GRKS+D+     +  A++RRV
Sbjct: 209 GFLVAENPSFLNFEFNNGNESKRRHSSFVREEREFV-SVGRKSVDIYPSSTV--AERRRV 265

Query: 206 AALPLEKKEKEYVKNLRPSVWLTEQFPLKTEDLLPLLDILANKVKAVRRLRELLTTKFPP 385
            A+P + KEKEYV++L+PSVWLTEQFPLK E+LLPLLDILANKVKAVRR+RELLTTKFP 
Sbjct: 266 VAVPEKVKEKEYVRSLKPSVWLTEQFPLKIEELLPLLDILANKVKAVRRMRELLTTKFPA 325

Query: 386 GXXXXXXXXXXXXXXXXXXXXXXXXELQPLEQF 484
           G                        EL P EQF
Sbjct: 326 GTFPVKVAIPVVPTVRVVITFTKFVELPPTEQF 358


>ref|XP_002316534.1| predicted protein [Populus trichocarpa] gi|222859599|gb|EEE97146.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score =  150 bits (379), Expect = 1e-34
 Identities = 87/153 (56%), Positives = 100/153 (65%), Gaps = 5/153 (3%)
 Frame = +2

Query: 41  GFLVAENPRFSTSSFET-----RRHSSFVREERDFVLSNGRKSLDVKQPLPLMAADKRRV 205
           GF VAENP F    F       RRHSSFVREER+FV S GRKS+D+     +   ++RRV
Sbjct: 209 GFFVAENPSFLNFEFNNGNESKRRHSSFVREEREFV-SVGRKSVDIYPSSTV--TERRRV 265

Query: 206 AALPLEKKEKEYVKNLRPSVWLTEQFPLKTEDLLPLLDILANKVKAVRRLRELLTTKFPP 385
            A+P + KEKEYVK+L+PSVWLTEQFPLK E+LLPLLDILANKVKAVRR+RELLTTKFP 
Sbjct: 266 VAVPEKVKEKEYVKSLKPSVWLTEQFPLKIEELLPLLDILANKVKAVRRMRELLTTKFPA 325

Query: 386 GXXXXXXXXXXXXXXXXXXXXXXXXELQPLEQF 484
           G                        EL P+EQF
Sbjct: 326 GTFPVKVAIPVVPTVRVVITFTKFVELPPVEQF 358


>ref|XP_002273433.1| PREDICTED: ankyrin repeat domain-containing protein 13C-A [Vitis
           vinifera]
          Length = 586

 Score =  148 bits (374), Expect = 4e-34
 Identities = 90/163 (55%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
 Frame = +2

Query: 2   EFIPXXXXXXXXXGFLVAENPRFSTSSFETRRHSSFVREERDFVLSNGRKSLDVKQPLPL 181
           + +P         GFLVAEN        + RRHSSFVREER+F LS GRKS+D+    P 
Sbjct: 328 QVLPLELDEDAEEGFLVAEN----FGPPDRRRHSSFVREEREF-LSVGRKSVDI----PS 378

Query: 182 MAADKRRV--AALPLEKKEKEYVKNLRPSVWLTEQFPLKTEDLLPLLDILANKVKAVRRL 355
            A D+RR+  A  P + KEKEY+K+LRPSVWLTEQFPLKTE+LLPLLDILANKVKAVRR+
Sbjct: 379 AAPDRRRLSPAVAPPQTKEKEYLKSLRPSVWLTEQFPLKTEELLPLLDILANKVKAVRRM 438

Query: 356 RELLTTKFPPGXXXXXXXXXXXXXXXXXXXXXXXXELQPLEQF 484
           RELLTTKFPPG                        ELQ  EQF
Sbjct: 439 RELLTTKFPPGTFPVKLAIPVVPTVRVVITFTKFVELQSTEQF 481


>ref|XP_002518472.1| protein binding protein, putative [Ricinus communis]
           gi|223542317|gb|EEF43859.1| protein binding protein,
           putative [Ricinus communis]
          Length = 600

 Score =  144 bits (362), Expect = 1e-32
 Identities = 84/152 (55%), Positives = 99/152 (65%), Gaps = 4/152 (2%)
 Frame = +2

Query: 41  GFLVAENPRF--STSSFETRRHSSFVREERDFVLSNGRKSLDVKQPLPLMAADKRRVAAL 214
           GFLVAENP F  + S+ + RRHSSFVRE R++V S GRKS+D+     + A  +R    L
Sbjct: 345 GFLVAENPNFGFNNSNSDRRRHSSFVREGREWV-SVGRKSVDIIPSSSISAPPRRSAVTL 403

Query: 215 PL--EKKEKEYVKNLRPSVWLTEQFPLKTEDLLPLLDILANKVKAVRRLRELLTTKFPPG 388
               + KEKEYV++LRPSVWLTEQFPLKT++LLPLLDILANKVKAVRR+RELLTTKFP G
Sbjct: 404 APTPQTKEKEYVRSLRPSVWLTEQFPLKTDELLPLLDILANKVKAVRRMRELLTTKFPAG 463

Query: 389 XXXXXXXXXXXXXXXXXXXXXXXXELQPLEQF 484
                                   EL P EQF
Sbjct: 464 TFPVKLAIPVVPTVRVVITFTKFVELHPTEQF 495


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