BLASTX nr result

ID: Coptis25_contig00024509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024509
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321498.1| predicted protein [Populus trichocarpa] gi|2...   242   4e-62
ref|XP_002277457.1| PREDICTED: probable protein phosphatase 2C 8...   240   2e-61
ref|XP_003620355.1| hypothetical protein MTR_6g081850 [Medicago ...   231   8e-59
ref|XP_003620354.1| hypothetical protein MTR_6g081850 [Medicago ...   231   8e-59
ref|XP_004160432.1| PREDICTED: probable protein phosphatase 2C 8...   230   2e-58

>ref|XP_002321498.1| predicted protein [Populus trichocarpa] gi|222868494|gb|EEF05625.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  242 bits (618), Expect = 4e-62
 Identities = 128/164 (78%), Positives = 133/164 (81%), Gaps = 1/164 (0%)
 Frame = -2

Query: 651 KVFIANIGDAKAVVARXXXXXXXXXXSDGTSLLKAIVLTREHKAIYPLERARIMKAGGSV 472
           KVFIANIGDAKAV+AR           DG S LKAIVLTREHKAIYP ERARI KAGGSV
Sbjct: 102 KVFIANIGDAKAVLARSSIIDGSQNHPDGVSPLKAIVLTREHKAIYPQERARIQKAGGSV 161

Query: 471 T-NGRLQGRLEVSRAFGDRQFKKVGVSANPDVHSFDLTKREHFIILGCDGLWGVFGPSDA 295
           + NGRLQGRLEVSRAFGDRQFKKVGV A PD+HSFDLT REHFIILGCDGLWGVFGPSDA
Sbjct: 162 SSNGRLQGRLEVSRAFGDRQFKKVGVVATPDIHSFDLTDREHFIILGCDGLWGVFGPSDA 221

Query: 294 VDFVQKLLKEGLSVATVSXXXXXXXXXXXRCKDNCTAIIIVFKH 163
           V+FVQKLLKEGL+VA VS           RCKDNCTAIIIVFKH
Sbjct: 222 VEFVQKLLKEGLTVAAVSRRLVREAVLERRCKDNCTAIIIVFKH 265


>ref|XP_002277457.1| PREDICTED: probable protein phosphatase 2C 8 [Vitis vinifera]
           gi|297734261|emb|CBI15508.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score =  240 bits (612), Expect = 2e-61
 Identities = 127/163 (77%), Positives = 133/163 (81%), Gaps = 1/163 (0%)
 Frame = -2

Query: 651 KVFIANIGDAKAVVARXXXXXXXXXXSDGTSLLKAIVLTREHKAIYPLERARIMKAGGSV 472
           KVF+ANIGDAKAVVAR          SDG S LKAIVLTREHKAIYP ERARI KAGGSV
Sbjct: 214 KVFVANIGDAKAVVARSSTTDGSENQSDGVSQLKAIVLTREHKAIYPQERARIQKAGGSV 273

Query: 471 T-NGRLQGRLEVSRAFGDRQFKKVGVSANPDVHSFDLTKREHFIILGCDGLWGVFGPSDA 295
           + NGRLQGRLEVSRAFGDRQFKKVGV A PDVHSFDLT+REHFIILGCDGLWGVFGPSDA
Sbjct: 274 SSNGRLQGRLEVSRAFGDRQFKKVGVVATPDVHSFDLTEREHFIILGCDGLWGVFGPSDA 333

Query: 294 VDFVQKLLKEGLSVATVSXXXXXXXXXXXRCKDNCTAIIIVFK 166
           VDFV K+LKEGL VATVS           RCKDNCTAI+IVF+
Sbjct: 334 VDFVHKMLKEGLPVATVSRRLVREAVRERRCKDNCTAIVIVFR 376


>ref|XP_003620355.1| hypothetical protein MTR_6g081850 [Medicago truncatula]
           gi|355495370|gb|AES76573.1| hypothetical protein
           MTR_6g081850 [Medicago truncatula]
          Length = 225

 Score =  231 bits (590), Expect = 8e-59
 Identities = 122/165 (73%), Positives = 130/165 (78%), Gaps = 1/165 (0%)
 Frame = -2

Query: 651 KVFIANIGDAKAVVARXXXXXXXXXXSDGTSLLKAIVLTREHKAIYPLERARIMKAGGSV 472
           KVFIAN+GDAKAV+AR          SDG   LKAIVLTREHK I+P ERARI KAGG V
Sbjct: 61  KVFIANVGDAKAVLARSTIPDGSKDNSDGVPALKAIVLTREHKPIFPQERARIQKAGGIV 120

Query: 471 T-NGRLQGRLEVSRAFGDRQFKKVGVSANPDVHSFDLTKREHFIILGCDGLWGVFGPSDA 295
           + NGRLQGRLEVSRAFGDRQFKKVG+ A PD+HSFDLT R+ FIILGCDGLWGVFGPSDA
Sbjct: 121 SSNGRLQGRLEVSRAFGDRQFKKVGLVATPDIHSFDLTDRDRFIILGCDGLWGVFGPSDA 180

Query: 294 VDFVQKLLKEGLSVATVSXXXXXXXXXXXRCKDNCTAIIIVFKHN 160
           VDFVQKLLKEGLSV TVS           RCKDNCTAI+IVFK N
Sbjct: 181 VDFVQKLLKEGLSVTTVSRRLVKEAVRERRCKDNCTAIVIVFKQN 225


>ref|XP_003620354.1| hypothetical protein MTR_6g081850 [Medicago truncatula]
           gi|355495369|gb|AES76572.1| hypothetical protein
           MTR_6g081850 [Medicago truncatula]
          Length = 321

 Score =  231 bits (590), Expect = 8e-59
 Identities = 122/165 (73%), Positives = 130/165 (78%), Gaps = 1/165 (0%)
 Frame = -2

Query: 651 KVFIANIGDAKAVVARXXXXXXXXXXSDGTSLLKAIVLTREHKAIYPLERARIMKAGGSV 472
           KVFIAN+GDAKAV+AR          SDG   LKAIVLTREHK I+P ERARI KAGG V
Sbjct: 157 KVFIANVGDAKAVLARSTIPDGSKDNSDGVPALKAIVLTREHKPIFPQERARIQKAGGIV 216

Query: 471 T-NGRLQGRLEVSRAFGDRQFKKVGVSANPDVHSFDLTKREHFIILGCDGLWGVFGPSDA 295
           + NGRLQGRLEVSRAFGDRQFKKVG+ A PD+HSFDLT R+ FIILGCDGLWGVFGPSDA
Sbjct: 217 SSNGRLQGRLEVSRAFGDRQFKKVGLVATPDIHSFDLTDRDRFIILGCDGLWGVFGPSDA 276

Query: 294 VDFVQKLLKEGLSVATVSXXXXXXXXXXXRCKDNCTAIIIVFKHN 160
           VDFVQKLLKEGLSV TVS           RCKDNCTAI+IVFK N
Sbjct: 277 VDFVQKLLKEGLSVTTVSRRLVKEAVRERRCKDNCTAIVIVFKQN 321


>ref|XP_004160432.1| PREDICTED: probable protein phosphatase 2C 8-like [Cucumis sativus]
          Length = 348

 Score =  230 bits (586), Expect = 2e-58
 Identities = 119/162 (73%), Positives = 132/162 (81%), Gaps = 1/162 (0%)
 Frame = -2

Query: 648 VFIANIGDAKAVVARXXXXXXXXXXSDGTSLLKAIVLTREHKAIYPLERARIMKAGGSV- 472
           VF+AN+GDAKAVVAR          S+G S LKAIVLTREHKAIYP ERARI KAGG V 
Sbjct: 185 VFVANVGDAKAVVARSLTTDKSTTNSNGGSSLKAIVLTREHKAIYPQERARIQKAGGVVG 244

Query: 471 TNGRLQGRLEVSRAFGDRQFKKVGVSANPDVHSFDLTKREHFIILGCDGLWGVFGPSDAV 292
           +NGRLQGRLEVSRAFGDRQFKK+GV A PD+HSF+LT REHFIILGCDGLWGVFGPSDAV
Sbjct: 245 SNGRLQGRLEVSRAFGDRQFKKLGVIATPDIHSFELTDREHFIILGCDGLWGVFGPSDAV 304

Query: 291 DFVQKLLKEGLSVATVSXXXXXXXXXXXRCKDNCTAIIIVFK 166
           DFVQKLLK+GLSVA++S           RCKDNCTAI++VF+
Sbjct: 305 DFVQKLLKDGLSVASISRRLVREAIRERRCKDNCTAIVVVFR 346


Top