BLASTX nr result

ID: Coptis25_contig00024493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024493
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513297.1| strubbelig receptor, putative [Ricinus commu...   120   2e-25
ref|XP_002310348.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_003530365.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...   112   7e-23
ref|XP_002269717.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...   105   5e-21
ref|XP_003604115.1| Protein STRUBBELIG-RECEPTOR FAMILY [Medicago...   104   2e-20

>ref|XP_002513297.1| strubbelig receptor, putative [Ricinus communis]
           gi|223547205|gb|EEF48700.1| strubbelig receptor,
           putative [Ricinus communis]
          Length = 694

 Score =  120 bits (302), Expect = 2e-25
 Identities = 77/195 (39%), Positives = 105/195 (53%), Gaps = 13/195 (6%)
 Frame = +1

Query: 85  DVENNRFTGSVPEKLRDIDTIITGGNAFSSGAXXXXXXXXXXXXXXXXXPXXXXXXXXXX 264
           DVE+N F+G VP++L  I+ I TGGN++SSG                             
Sbjct: 214 DVEDNEFSGWVPDELEGIENIETGGNSWSSGPAPPPPPGAKSISAKQKEHEKGAGGKDGM 273

Query: 265 XXXXXXXXXXS-----------FIPKSSSSATHYLEDERLSQRRSFTPLVSRELSIGKPN 411
                     +           F  + SS ++H+L++ER SQRR+FTPL S+ELS     
Sbjct: 274 SGLSIALIVLASLVVVALLIILFSTRKSSPSSHFLDEERASQRRAFTPLSSQELS----- 328

Query: 412 NFKEMKTLEP--SPSVKVKSLQISPSMGLKRPPSEHVSSLSDAEFASRLNVRRSTSIRAV 585
              +    EP  S ++ +K++Q SPS+  K P S+   SL+D EFAS LN RR+TS+RAV
Sbjct: 329 --NDSHKTEPFDSIAIDIKTMQKSPSVSYKPPHSDFAQSLNDNEFASHLNARRNTSVRAV 386

Query: 586 NYSLADLQAATGNFA 630
           +YSLADLQ ATGNFA
Sbjct: 387 SYSLADLQTATGNFA 401


>ref|XP_002310348.1| predicted protein [Populus trichocarpa] gi|222853251|gb|EEE90798.1|
           predicted protein [Populus trichocarpa]
          Length = 672

 Score =  114 bits (286), Expect = 1e-23
 Identities = 70/188 (37%), Positives = 101/188 (53%), Gaps = 6/188 (3%)
 Frame = +1

Query: 85  DVENNRFTGSVPEKLRDIDTIITGGNAFSSGAXXXXXXXXXXXXXXXXXPXXXXXXXXXX 264
           ++++N FTG VP+ L  ID + TGGNA+SSG                             
Sbjct: 214 NIKDNEFTGWVPDSLNGIDNLETGGNAWSSGPAPRGKSSSAHGKGSGKGGMNGLAIALIV 273

Query: 265 XXXXXXXXXXSFI--PKSSSSATHYLEDERLSQRRSFTPLVSRELS----IGKPNNFKEM 426
                       +   + SS ++++LE++  S  R+FTPL S ELS          FKE+
Sbjct: 274 LASLVVVGLLIILLSKRRSSPSSNFLEEDNGSWHRAFTPLSSHELSNDTRAAIKKEFKEI 333

Query: 427 KTLEPSPSVKVKSLQISPSMGLKRPPSEHVSSLSDAEFASRLNVRRSTSIRAVNYSLADL 606
           + +  S S+ +K+LQ +PS+G K PPS+   S+SD EFA RLN  R+TS+R++ +SL DL
Sbjct: 334 EPINLSGSIDIKNLQKAPSVGYKPPPSDFSESISDNEFAIRLNAGRNTSVRSIAFSLTDL 393

Query: 607 QAATGNFA 630
           Q ATGNFA
Sbjct: 394 QTATGNFA 401


>ref|XP_003530365.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 5-like [Glycine max]
          Length = 1038

 Score =  112 bits (279), Expect = 7e-23
 Identities = 72/188 (38%), Positives = 104/188 (55%), Gaps = 6/188 (3%)
 Frame = +1

Query: 85   DVENNRFTGSVPEKLRDIDTIITGGNAFSSGAXXXXXXXXXXXXXXXXXPXXXXXXXXXX 264
            +VENN+FTG VPE+L++I+ + TGGN++SSG                             
Sbjct: 575  NVENNKFTGWVPEELKEINNLQTGGNSWSSGPAPPPPPGTPPIKHSEKKNDKSVISGIAI 634

Query: 265  XXXXXXXXXXSFIP------KSSSSATHYLEDERLSQRRSFTPLVSRELSIGKPNNFKEM 426
                        I       +SS +++H+++++R SQ RSFTPL S+ELS  K +    M
Sbjct: 635  AGIAFGVLAVIIIVVALSKRRSSKTSSHFIDEDRNSQHRSFTPLASQELS--KDSGHDSM 692

Query: 427  KTLEPSPSVKVKSLQISPSMGLKRPPSEHVSSLSDAEFASRLNVRRSTSIRAVNYSLADL 606
                 S S+ VK+LQ SPS+ ++   S+ V S +D EFA+RLN +RSTSIR   +S A+L
Sbjct: 693  D----STSIDVKALQKSPSVSVRSSVSDCVQSFNDNEFANRLNSKRSTSIRVTTFSHAEL 748

Query: 607  QAATGNFA 630
            Q+AT NFA
Sbjct: 749  QSATANFA 756


>ref|XP_002269717.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 5-like [Vitis
           vinifera]
          Length = 1068

 Score =  105 bits (263), Expect = 5e-21
 Identities = 60/112 (53%), Positives = 79/112 (70%), Gaps = 1/112 (0%)
 Frame = +1

Query: 298 FIPKSSSSATHYLEDERLSQRRSFTPLVSRELSIGK-PNNFKEMKTLEPSPSVKVKSLQI 474
           F  +SS   +H+L++ERLS  R FTP+VS+ELS    P N+ + K+   S S+ VK+LQ 
Sbjct: 681 FSRRSSPPPSHFLDEERLSNHRPFTPIVSQELSNDMHPTNYNDFKSSNSSNSMDVKALQK 740

Query: 475 SPSMGLKRPPSEHVSSLSDAEFASRLNVRRSTSIRAVNYSLADLQAATGNFA 630
           SPS+GLKRPPS +       + A+RL+V+RSTSIRA  YSLADLQ+AT NFA
Sbjct: 741 SPSIGLKRPPSLN-------DLANRLSVKRSTSIRATAYSLADLQSATRNFA 785


>ref|XP_003604115.1| Protein STRUBBELIG-RECEPTOR FAMILY [Medicago truncatula]
           gi|355505170|gb|AES86312.1| Protein STRUBBELIG-RECEPTOR
           FAMILY [Medicago truncatula]
          Length = 790

 Score =  104 bits (259), Expect = 2e-20
 Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 13/195 (6%)
 Frame = +1

Query: 85  DVENNRFTGSVPEKLRDIDTIITGGNAFSSGAXXXXXXXXXXXXXXXXXPXXXXXXXXXX 264
           +VENN+FTG +PE+L+DI+++ TGGN++ +G                             
Sbjct: 305 NVENNKFTGWIPEELKDINSLQTGGNSWKTGPAPPPPPGTPPIKHHSEEKEGKSSNSLVT 364

Query: 265 XXXXXXXXXXSFIP----------KSSSSATHYLEDERLSQRRSFTPLVSRELSI---GK 405
                     + +           KSS +++ ++++ER SQ RSFTPL S+EL+    G 
Sbjct: 365 GLIIAGIAFGALVVIILIAALFKRKSSYASSRFIDEERRSQHRSFTPLASQELTKDLGGN 424

Query: 406 PNNFKEMKTLEPSPSVKVKSLQISPSMGLKRPPSEHVSSLSDAEFASRLNVRRSTSIRAV 585
              +K  K ++ S S+ + +LQ +PS+ ++   S+ V + +D EFA+RLN R+S SIR  
Sbjct: 425 DTEYKGFKAMD-STSIDIMALQKNPSVSVRSSVSDCVQNFNDNEFANRLNSRKSASIRCT 483

Query: 586 NYSLADLQAATGNFA 630
            +SL +LQ  T NFA
Sbjct: 484 AFSLGELQTGTANFA 498


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