BLASTX nr result

ID: Coptis25_contig00024474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024474
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277728.1| PREDICTED: uncharacterized protein LOC100248...   213   4e-53
ref|XP_002299308.1| predicted protein [Populus trichocarpa] gi|2...   202   4e-50
ref|NP_001238126.1| uncharacterized protein LOC100499928 [Glycin...   199   4e-49
ref|XP_003601777.1| hypothetical protein MTR_3g085280 [Medicago ...   197   1e-48
ref|NP_001240989.1| uncharacterized protein LOC100795278 [Glycin...   197   1e-48

>ref|XP_002277728.1| PREDICTED: uncharacterized protein LOC100248862 [Vitis vinifera]
           gi|297738458|emb|CBI27659.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  213 bits (541), Expect = 4e-53
 Identities = 125/204 (61%), Positives = 135/204 (66%), Gaps = 10/204 (4%)
 Frame = +1

Query: 28  MASGTALRSIFLTDPFRFINKKTRSCSLFDCGRVRVKVQPEPRRL-----CIRXXXXXXX 192
           MA  T LRS+FLT+P+R ++    S     C R         RRL       R       
Sbjct: 1   MACRTMLRSVFLTEPWRPVHSNRVSVFPPLCTRG----SSSSRRLNCECRIARARRTLVS 56

Query: 193 XXXXXXXXXEQGGGPPQEAVLKAISEVSKTEGRIGQTTNVVIGGTVT-----EWLALDQK 357
                    +   GPPQEAVLKAISEVSKTEGR+GQTTNVVIGGTVT     EWLALDQK
Sbjct: 57  CSNGETPSSQDDQGPPQEAVLKAISEVSKTEGRVGQTTNVVIGGTVTDDSTNEWLALDQK 116

Query: 358 VNSYPTVRGFTAIGTGGDDFVQAMVVAVESVLQEPVPEDRVTQKVSSGGKYVSVNIGPXX 537
           VNSYPTVRGFTAIGTGGDDFVQAMVVAVESVLQ P+PE  V QK+SS GKYVSVNIGP  
Sbjct: 117 VNSYPTVRGFTAIGTGGDDFVQAMVVAVESVLQHPIPEGHVKQKLSSRGKYVSVNIGPVR 176

Query: 538 XXXXXXXXAVYNAMKRDDRMKYFL 609
                   AVYNAM+RDDRMKYFL
Sbjct: 177 VISSEQVQAVYNAMRRDDRMKYFL 200


>ref|XP_002299308.1| predicted protein [Populus trichocarpa] gi|222846566|gb|EEE84113.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  202 bits (515), Expect = 4e-50
 Identities = 104/135 (77%), Positives = 113/135 (83%), Gaps = 5/135 (3%)
 Frame = +1

Query: 220 EQGGGPPQEAVLKAISEVSKTEGRIGQTTNVVIGGTVT-----EWLALDQKVNSYPTVRG 384
           +Q   PPQEAVLKAISEVS+TEGR+GQTTNVVIGGTV      EWLALD+KVNSYPTVRG
Sbjct: 7   DQDQDPPQEAVLKAISEVSRTEGRVGQTTNVVIGGTVADDSTNEWLALDKKVNSYPTVRG 66

Query: 385 FTAIGTGGDDFVQAMVVAVESVLQEPVPEDRVTQKVSSGGKYVSVNIGPXXXXXXXXXXA 564
           FTAIGTGGDDFVQAMV+AVESV+Q+P+PE RV QKVSS GKYVSVNIGP          A
Sbjct: 67  FTAIGTGGDDFVQAMVIAVESVIQQPIPEGRVRQKVSSRGKYVSVNIGPVQVVSSEQVQA 126

Query: 565 VYNAMKRDDRMKYFL 609
           VYNAM+RDDRMKYFL
Sbjct: 127 VYNAMRRDDRMKYFL 141


>ref|NP_001238126.1| uncharacterized protein LOC100499928 [Glycine max]
           gi|255627741|gb|ACU14215.1| unknown [Glycine max]
          Length = 186

 Score =  199 bits (506), Expect = 4e-49
 Identities = 115/204 (56%), Positives = 132/204 (64%), Gaps = 10/204 (4%)
 Frame = +1

Query: 28  MASGTALRSIFLTDPFR-----FINKKTRSCSLFDCGRVRVKVQPEPRRLCIRXXXXXXX 192
           MA  + LRS  L +PF+     F N+  R+C               P R   R       
Sbjct: 1   MACRSMLRSSILVEPFQLQPLHFSNRPVRAC---------------PFR---RGKGVTLR 42

Query: 193 XXXXXXXXXEQGGGPPQEAVLKAISEVSKTEGRIGQTTNVVIGGTVT-----EWLALDQK 357
                    +   GPPQEAVLKAISEVSK EGR+GQTTN+VIGGTV+     EWL LDQK
Sbjct: 43  CSSNETPSSQDDQGPPQEAVLKAISEVSKAEGRVGQTTNMVIGGTVSDDSTNEWLTLDQK 102

Query: 358 VNSYPTVRGFTAIGTGGDDFVQAMVVAVESVLQEPVPEDRVTQKVSSGGKYVSVNIGPXX 537
           VNSYPTVRGFTAIGTGG+DFVQAMVVAVESV+Q+P+P+ RV QK+S+ GKYVSVNIGP  
Sbjct: 103 VNSYPTVRGFTAIGTGGEDFVQAMVVAVESVIQQPIPQGRVKQKLSARGKYVSVNIGPVQ 162

Query: 538 XXXXXXXXAVYNAMKRDDRMKYFL 609
                   AVYNAM+RDDRMKYFL
Sbjct: 163 VVSSEQVQAVYNAMRRDDRMKYFL 186


>ref|XP_003601777.1| hypothetical protein MTR_3g085280 [Medicago truncatula]
           gi|355490825|gb|AES72028.1| hypothetical protein
           MTR_3g085280 [Medicago truncatula]
           gi|388510352|gb|AFK43242.1| unknown [Medicago
           truncatula]
          Length = 205

 Score =  197 bits (502), Expect = 1e-48
 Identities = 101/131 (77%), Positives = 111/131 (84%), Gaps = 5/131 (3%)
 Frame = +1

Query: 232 GPPQEAVLKAISEVSKTEGRIGQTTNVVIGGTVT-----EWLALDQKVNSYPTVRGFTAI 396
           GPPQEAVLKAISEVSKTEGRIGQTTN+VIGGTVT     EW+ALD+KVN+YPTVRGFTAI
Sbjct: 75  GPPQEAVLKAISEVSKTEGRIGQTTNMVIGGTVTDDSTNEWVALDKKVNTYPTVRGFTAI 134

Query: 397 GTGGDDFVQAMVVAVESVLQEPVPEDRVTQKVSSGGKYVSVNIGPXXXXXXXXXXAVYNA 576
           GTGGDDFVQAMVVAVESV+Q+P+P+  V  KVS+ GKYVSVNIGP          AVYNA
Sbjct: 135 GTGGDDFVQAMVVAVESVIQQPIPQGSVKHKVSARGKYVSVNIGPVQVVSSEQVQAVYNA 194

Query: 577 MKRDDRMKYFL 609
           M+RDDRMKYFL
Sbjct: 195 MRRDDRMKYFL 205


>ref|NP_001240989.1| uncharacterized protein LOC100795278 [Glycine max]
           gi|255645459|gb|ACU23225.1| unknown [Glycine max]
          Length = 186

 Score =  197 bits (502), Expect = 1e-48
 Identities = 100/131 (76%), Positives = 111/131 (84%), Gaps = 5/131 (3%)
 Frame = +1

Query: 232 GPPQEAVLKAISEVSKTEGRIGQTTNVVIGGTVT-----EWLALDQKVNSYPTVRGFTAI 396
           GPPQEAVLKAISEVSK EGR+GQTTN+VIGGTV+     EWL LDQKVNSYPTVRGFTAI
Sbjct: 56  GPPQEAVLKAISEVSKAEGRVGQTTNMVIGGTVSDDSSNEWLTLDQKVNSYPTVRGFTAI 115

Query: 397 GTGGDDFVQAMVVAVESVLQEPVPEDRVTQKVSSGGKYVSVNIGPXXXXXXXXXXAVYNA 576
           GTGG+DFVQAMVVAVESV+Q+P+P+ RV QK+S+ GKYVSVNIGP          AVYNA
Sbjct: 116 GTGGEDFVQAMVVAVESVIQQPIPQGRVKQKLSARGKYVSVNIGPVQVVSSEQVQAVYNA 175

Query: 577 MKRDDRMKYFL 609
           M+RDDRMKYFL
Sbjct: 176 MRRDDRMKYFL 186


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