BLASTX nr result
ID: Coptis25_contig00024462
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024462 (270 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241... 63 3e-08 ref|XP_002298340.1| predicted protein [Populus trichocarpa] gi|2... 61 1e-07 emb|CAN83895.1| hypothetical protein VITISV_039114 [Vitis vinifera] 60 2e-07 >ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241598 [Vitis vinifera] gi|297746029|emb|CBI16085.3| unnamed protein product [Vitis vinifera] Length = 393 Score = 62.8 bits (151), Expect = 3e-08 Identities = 39/109 (35%), Positives = 45/109 (41%), Gaps = 51/109 (46%) Frame = +3 Query: 12 FHGGGYIPQQDGVGDGAYDVFQNE------------------------------------ 83 +H GYIPQQDG GD A +VF+ E Sbjct: 209 YHTSGYIPQQDGAGDPAPEVFEVEVSQGSNSIKGHDILTKANREIFPQVAGSYVRIPQLD 268 Query: 84 ---------------LYPYQGVASEDYNTVNTPAPLDLHAGTPNVGAQN 185 +Y YQGV +EDYN VNTPAP D+ AGTP VG QN Sbjct: 269 GPIPDPYEDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQAGTPAVGIQN 317 >ref|XP_002298340.1| predicted protein [Populus trichocarpa] gi|222845598|gb|EEE83145.1| predicted protein [Populus trichocarpa] Length = 409 Score = 60.8 bits (146), Expect = 1e-07 Identities = 38/102 (37%), Positives = 45/102 (44%), Gaps = 41/102 (40%) Frame = +3 Query: 3 APHFHGGGYIPQQDGVGDGAYDVFQNE--------------------------------- 83 AP ++ GG+IPQQDG D A +V Q E Sbjct: 231 APKYNNGGFIPQQDGAVDSASEVSQVECDTITTKNREILARVSRSYVKIPQVDGPIPDPY 290 Query: 84 --------LYPYQGVASEDYNTVNTPAPLDLHAGTPNVGAQN 185 +Y YQGVA+EDYN NTPAP DL A TP V +QN Sbjct: 291 DDMLSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAVVSQN 332 >emb|CAN83895.1| hypothetical protein VITISV_039114 [Vitis vinifera] Length = 630 Score = 60.1 bits (144), Expect = 2e-07 Identities = 32/54 (59%), Positives = 36/54 (66%), Gaps = 2/54 (3%) Frame = +3 Query: 30 IPQQDG-VGDGAYDVFQN-ELYPYQGVASEDYNTVNTPAPLDLHAGTPNVGAQN 185 IPQ DG + D DV +Y YQGV +EDYN VNTPAP D+ AGTP VG QN Sbjct: 340 IPQLDGPIPDPYEDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQAGTPAVGIQN 393