BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024461
         (1569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23113.3| unnamed protein product [Vitis vinifera]              515   e-143
ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]    507   e-141
ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]       472   e-130
ref|XP_002317849.1| predicted protein [Populus trichocarpa] gi|2...   465   e-128
ref|NP_200220.2| DNA mismatch repair protein MutS, type 2 [Arabi...   449   e-124

>emb|CBI23113.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  515 bits (1327), Expect = e-143
 Identities = 263/395 (66%), Positives = 320/395 (81%)
 Frame = +3

Query: 3    LEMEVAKLEKAHPIPVDFFVDTKTRVLIITGPNTGGKTICLKTIGLAAMMAKSGLYVLSS 182
            LEM+V +LE++ P+PVDFF+  +TRVL+ITGPNTGGKTICLKT+GLAAMMA+SGL+VL++
Sbjct: 414  LEMQVTRLEQSPPVPVDFFIAQRTRVLVITGPNTGGKTICLKTVGLAAMMARSGLHVLAA 473

Query: 183  EPVRIPWFDSIFSDIGDEQSLSHSLSTFSGHLRQIGAIQALSTCQSLVLLDEVGGGTNPL 362
            EPVRIPWFD +F+DIGDEQSLS SLSTFSGHL+QI  I+A ST QSLVLLDEVG GTNPL
Sbjct: 474  EPVRIPWFDYVFADIGDEQSLSQSLSTFSGHLKQISDIKAQSTNQSLVLLDEVGAGTNPL 533

Query: 363  EGAALGMSILESFAEGGALLTIATTHHGELKTLKYSSTGVENACMEFDDINLKPTYKILW 542
            EGAALGMS+LESFAE GALLTIATTHH ELKTLKYS+   ENACMEFD++NLKPTYKILW
Sbjct: 534  EGAALGMSLLESFAETGALLTIATTHHSELKTLKYSNDAFENACMEFDEVNLKPTYKILW 593

Query: 543  GVPGRSNAINIAERLGLPNTVLDNARELYGTASAEINEVIIEMEQFKQDLQKHVQEADHY 722
            G+PGRSNAINIAERLG+P  VLD ARE YG ASAEINEVII+ME+FKQ+ Q+ V +A +Y
Sbjct: 594  GIPGRSNAINIAERLGVPKKVLDKAREQYGAASAEINEVIIDMERFKQEFQERVNDARYY 653

Query: 723  LILSRELHENLLAANEKITEHRITQRYRMLKEVSEVAAMARSTLHKRLRQLQESISHSPQ 902
            L+LSR+L+ENLL    K+ EH   QRY  ++EVSE AA+ARS LHK++RQL+ S +   Q
Sbjct: 654  LMLSRDLYENLLVTKRKLMEHGTNQRYGKMREVSEAAAVARSLLHKKVRQLRSSATRPSQ 713

Query: 903  ATVITTRQKNLVDNKQKITAKEAHQEVSNDSHLYAEYAKKSPSENRITLPKVGDMVHVLS 1082
             T     Q     + Q   A    +  +++S   A+ A++S SE +  +PKVGDMVHV S
Sbjct: 714  PTAADKSQHASATSNQHTAADINERPTTSESKHPAKVAQQSSSEKK-RVPKVGDMVHVSS 772

Query: 1083 LGKKATVLKVEPSKEEVVVQASNMKLRLKLSDLQT 1187
            LGKKATVL+VE SK ++VVQA NMKL+LKL+D++T
Sbjct: 773  LGKKATVLEVESSKGQLVVQAGNMKLKLKLTDVET 807


>ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]
          Length = 791

 Score =  507 bits (1305), Expect = e-141
 Identities = 259/388 (66%), Positives = 314/388 (80%)
 Frame = +3

Query: 24   LEKAHPIPVDFFVDTKTRVLIITGPNTGGKTICLKTIGLAAMMAKSGLYVLSSEPVRIPW 203
            LE++ P+PVDFF+  +TRVL+ITGPNTGGKTICLKT+GLAAMMA+SGL+VL++EPVRIPW
Sbjct: 405  LEQSPPVPVDFFIAQRTRVLVITGPNTGGKTICLKTVGLAAMMARSGLHVLAAEPVRIPW 464

Query: 204  FDSIFSDIGDEQSLSHSLSTFSGHLRQIGAIQALSTCQSLVLLDEVGGGTNPLEGAALGM 383
            FD +F+DIGDEQSLS SLSTFSGHL+QI  I+A ST QSLVLLDEVG GTNPLEGAALGM
Sbjct: 465  FDYVFADIGDEQSLSQSLSTFSGHLKQISDIKAQSTNQSLVLLDEVGAGTNPLEGAALGM 524

Query: 384  SILESFAEGGALLTIATTHHGELKTLKYSSTGVENACMEFDDINLKPTYKILWGVPGRSN 563
            S+LESFAE GALLTIATTHH ELKTLKYS+   ENACMEFD++NLKPTYKILWG+PGRSN
Sbjct: 525  SLLESFAETGALLTIATTHHSELKTLKYSNDAFENACMEFDEVNLKPTYKILWGIPGRSN 584

Query: 564  AINIAERLGLPNTVLDNARELYGTASAEINEVIIEMEQFKQDLQKHVQEADHYLILSREL 743
            AINIAERLG+P  VLD ARE YG ASAEINEVII+ME+FKQ+ Q+ V +A +YL+LSR+L
Sbjct: 585  AINIAERLGVPKKVLDKAREQYGAASAEINEVIIDMERFKQEFQERVNDARYYLMLSRDL 644

Query: 744  HENLLAANEKITEHRITQRYRMLKEVSEVAAMARSTLHKRLRQLQESISHSPQATVITTR 923
            +ENLL    K+ EH   QRY  ++EVSE AA+ARS LHK++RQL+ S +   Q T     
Sbjct: 645  YENLLVTKRKLMEHGTNQRYGKMREVSEAAAVARSLLHKKVRQLRSSATRPSQPTAADKS 704

Query: 924  QKNLVDNKQKITAKEAHQEVSNDSHLYAEYAKKSPSENRITLPKVGDMVHVLSLGKKATV 1103
            Q     + Q   A    +  +++S   A+ A++S SE +  +PKVGDMVHV SLGKKATV
Sbjct: 705  QHASATSNQHTAADINERPTTSESKHPAKVAQQSSSEKK-RVPKVGDMVHVSSLGKKATV 763

Query: 1104 LKVEPSKEEVVVQASNMKLRLKLSDLQT 1187
            L+VE SK ++VVQA NMKL+LKL+D++T
Sbjct: 764  LEVESSKGQLVVQAGNMKLKLKLTDVET 791


>ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]
          Length = 792

 Score =  472 bits (1215), Expect = e-130
 Identities = 243/389 (62%), Positives = 298/389 (76%)
 Frame = +3

Query: 18   AKLEKAHPIPVDFFVDTKTRVLIITGPNTGGKTICLKTIGLAAMMAKSGLYVLSSEPVRI 197
            A L+ A P+PVDF V  KTRV++ITGPNTGGKTICLKT+GLAAMMAKSGLYVL+SE  +I
Sbjct: 403  AALDNAPPVPVDFLVSQKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLASESAQI 462

Query: 198  PWFDSIFSDIGDEQSLSHSLSTFSGHLRQIGAIQALSTCQSLVLLDEVGGGTNPLEGAAL 377
            PWFDS+F+DIGDEQSLS SLSTFSGHL+QI  I++ ST QSLVLLDEVG GTNPLEGAAL
Sbjct: 463  PWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKSQSTSQSLVLLDEVGAGTNPLEGAAL 522

Query: 378  GMSILESFAEGGALLTIATTHHGELKTLKYSSTGVENACMEFDDINLKPTYKILWGVPGR 557
            GM++LESFA+   LLT+ATTHHGELKTLKYS    ENACMEFD++NLKPTYK+LWGVPGR
Sbjct: 523  GMALLESFAQDSCLLTMATTHHGELKTLKYSDEAFENACMEFDEVNLKPTYKVLWGVPGR 582

Query: 558  SNAINIAERLGLPNTVLDNARELYGTASAEINEVIIEMEQFKQDLQKHVQEADHYLILSR 737
            SNAINIAERLGLP+ V+D AR LYG+ASAEI+EVI +ME+ KQ+ Q+ + EA HYL  SR
Sbjct: 583  SNAINIAERLGLPSVVVDTARMLYGSASAEIDEVITDMERLKQEYQELLDEARHYLRHSR 642

Query: 738  ELHENLLAANEKITEHRITQRYRMLKEVSEVAAMARSTLHKRLRQLQESISHSPQATVIT 917
             L+ +LL    KI E+    R++ +++VSE AAMARS LHK++R+L  S     Q     
Sbjct: 643  GLYNSLLNTRRKIIEYSTNLRFKKMRDVSEAAAMARSILHKKVRELDASAKQPSQNNKTI 702

Query: 918  TRQKNLVDNKQKITAKEAHQEVSNDSHLYAEYAKKSPSENRITLPKVGDMVHVLSLGKKA 1097
            +       NK +  A+     +++ S    +   +S S+ +   PKVGDMVHV SLGK+ 
Sbjct: 703  SSSNLSATNKSQTVAENKEPTIADKSASSVKVFNRSRSD-KSGPPKVGDMVHVSSLGKQV 761

Query: 1098 TVLKVEPSKEEVVVQASNMKLRLKLSDLQ 1184
            TVLKV+ SK E+VVQA NMKL+LKL+D+Q
Sbjct: 762  TVLKVDSSKGEIVVQAGNMKLKLKLTDIQ 790


>ref|XP_002317849.1| predicted protein [Populus trichocarpa] gi|222858522|gb|EEE96069.1|
            predicted protein [Populus trichocarpa]
          Length = 864

 Score =  465 bits (1197), Expect = e-128
 Identities = 247/409 (60%), Positives = 304/409 (74%), Gaps = 19/409 (4%)
 Frame = +3

Query: 12   EVAKLEKAHPIPVDFFVDTKTRVLIITGPNTGGKTICLKTIGLAAMMAKSGLYVLSSEPV 191
            +V+ L++A P+PVDFF+  KTRVL ITGPNTGGKTICLKT+GLAAMMAKSGL+VLSSE V
Sbjct: 457  DVSALDQARPVPVDFFISHKTRVLTITGPNTGGKTICLKTVGLAAMMAKSGLHVLSSESV 516

Query: 192  RIPWFDSIFSDIGDEQSLSHSLSTFSGHLRQIGAIQ-----ALSTCQSLVLLDEVGGGTN 356
             IPWFDS+F+DIGDEQSLS SLSTFSGHL+QI   +       S C++  L   VG GTN
Sbjct: 517  EIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISIREFPWNLTDSPCRTFDLNPRVGAGTN 576

Query: 357  PLEGAALGMSILESFAEGGALLTIATTHHGELKTLKYSSTGVENACMEFDDINLKPTYKI 536
            PLEGAALGMS+LESFA+ GALLTIATTHHGELK+LKYS+   ENACMEFD++NLKPTYKI
Sbjct: 577  PLEGAALGMSLLESFADSGALLTIATTHHGELKSLKYSNDAFENACMEFDEVNLKPTYKI 636

Query: 537  LWGVP--------------GRSNAINIAERLGLPNTVLDNARELYGTASAEINEVIIEME 674
            LWGVP              GRSNAINI+E+LGLP+ V+ NAREL+G ASAEINEVII+ME
Sbjct: 637  LWGVPVTILHNITAAVFPIGRSNAINISEKLGLPSVVVSNARELHGAASAEINEVIIDME 696

Query: 675  QFKQDLQKHVQEADHYLILSRELHENLLAANEKITEHRITQRYRMLKEVSEVAAMARSTL 854
            +FKQD Q+ + EA H+L+LS+ LHE L  A  KI EH   QRYR ++++SE A+MARS L
Sbjct: 697  RFKQDSQELLHEARHHLMLSKNLHEKLKLARRKIKEHGTEQRYRKMRQISEAASMARSIL 756

Query: 855  HKRLRQLQESISHSPQATVITTRQKNLVDNKQKITAKEAHQEVSNDSHLYAEYAKKSPSE 1034
            HK++RQL+   +H+ Q    T  QK L  +  + TA+  +   +           K PS 
Sbjct: 757  HKKVRQLR---AHATQTFQPTADQKQLSTSDSRFTAEAKNGRPTESMSTSVVEINKQPSA 813

Query: 1035 NRITLPKVGDMVHVLSLGKKATVLKVEPSKEEVVVQASNMKLRLKLSDL 1181
                LP+VGDMV V SLG+KATVL+V+ SKEE++VQA NMKL+LKL+++
Sbjct: 814  -MTELPEVGDMVQVSSLGRKATVLRVDRSKEEILVQAGNMKLKLKLAEI 861


>ref|NP_200220.2| DNA mismatch repair protein MutS, type 2 [Arabidopsis thaliana]
            gi|332009066|gb|AED96449.1| DNA mismatch repair protein
            MutS, type 2 [Arabidopsis thaliana]
          Length = 796

 Score =  449 bits (1156), Expect = e-124
 Identities = 232/386 (60%), Positives = 292/386 (75%)
 Frame = +3

Query: 24   LEKAHPIPVDFFVDTKTRVLIITGPNTGGKTICLKTIGLAAMMAKSGLYVLSSEPVRIPW 203
            L  A PIP DF +   TRVL+ITGPNTGGKTICLK++GLAAMMAKSGLYVL++E  RIPW
Sbjct: 418  LSGAPPIPADFQISKGTRVLVITGPNTGGKTICLKSVGLAAMMAKSGLYVLATESARIPW 477

Query: 204  FDSIFSDIGDEQSLSHSLSTFSGHLRQIGAIQALSTCQSLVLLDEVGGGTNPLEGAALGM 383
            FD+I++DIGDEQSL  SLSTFSGHL+QI  I + ST +SLVLLDEVG GTNPLEGAALGM
Sbjct: 478  FDNIYADIGDEQSLLQSLSTFSGHLKQISEILSHSTSRSLVLLDEVGAGTNPLEGAALGM 537

Query: 384  SILESFAEGGALLTIATTHHGELKTLKYSSTGVENACMEFDDINLKPTYKILWGVPGRSN 563
            +ILESFAE G+LLT+ATTHHGELKTLKYS++  ENACMEFDD+NLKPTYKILWGVPGRSN
Sbjct: 538  AILESFAESGSLLTMATTHHGELKTLKYSNSAFENACMEFDDLNLKPTYKILWGVPGRSN 597

Query: 564  AINIAERLGLPNTVLDNARELYGTASAEINEVIIEMEQFKQDLQKHVQEADHYLILSREL 743
            AINIA+RLGLP  ++++ARELYG+ASAEINEVI++ME++KQ+ Q+ + E+  Y+ LSREL
Sbjct: 598  AINIADRLGLPCDIIESARELYGSASAEINEVILDMERYKQEYQRLLNESRVYIRLSREL 657

Query: 744  HENLLAANEKITEHRITQRYRMLKEVSEVAAMARSTLHKRLRQLQESISHSPQATVITTR 923
            HENLL A + I +H   +R +M +E+++  +M RSTL + L+Q + S   S Q+ V T  
Sbjct: 658  HENLLTAQKNINDHSTKERRKMRQELTQAGSMTRSTLRRTLQQFRSSAGKSSQSKVATQL 717

Query: 924  QKNLVDNKQKITAKEAHQEVSNDSHLYAEYAKKSPSENRITLPKVGDMVHVLSLGKKATV 1103
            Q  +   K +     +   V           +  P      +P+VG  V V SLGKKATV
Sbjct: 718  QTKVKTTKDEDNGIRSSSVVER---------RPLPEAAAQKVPEVGSSVFVSSLGKKATV 768

Query: 1104 LKVEPSKEEVVVQASNMKLRLKLSDL 1181
            LKVE SK+E++VQ   MK+++KL+D+
Sbjct: 769  LKVEHSKKEILVQVGIMKMKVKLTDV 794