BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024458
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533738.1| conserved hypothetical protein [Ricinus comm...    60   1e-06
ref|XP_003636673.1| F-box family protein [Medicago truncatula] g...    59   1e-06
ref|XP_002316987.1| predicted protein [Populus trichocarpa] gi|2...    59   2e-06
ref|XP_003540862.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    58   3e-06
ref|XP_002319944.1| f-box family protein [Populus trichocarpa] g...    57   6e-06

>ref|XP_002533738.1| conserved hypothetical protein [Ricinus communis]
           gi|223526344|gb|EEF28641.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 539

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
 Frame = -3

Query: 666 LDGLSSAKSLTLSAWVIEVLPRAAEV-----IPTSFSTRHVKVKTWLSKYSIQGLKYILE 502
           L GL   +SLT+S W I+VLP  + +     IP     +H+K+   +SK  +  L  +L 
Sbjct: 345 LRGLRHCQSLTVSTWSIQVLPIESTLQQQLPIPLR-KVKHLKLIAAISKKELARLSCLLR 403

Query: 501 NSENLESLIVEITKP--------------KVKTAGIWESQEAAEVVSACRFNKLRFVEIR 364
           +  NLE L   ++ P               +     WESQ    +   C  N L+ + + 
Sbjct: 404 SCSNLEILTAVLSGPLDLLGFELPNSATDDIFEQTFWESQT---LPFPCLRNSLKQLTVT 460

Query: 363 NFQGYVNELELLKSMLKNAGALEKLTVLTSKNN 265
              G +NE+E++  +LKNA ALEK+ +L +  N
Sbjct: 461 GLMGRINEVEMIMFILKNAVALEKVILLLAGLN 493


>ref|XP_003636673.1| F-box family protein [Medicago truncatula]
           gi|355502608|gb|AES83811.1| F-box family protein
           [Medicago truncatula]
          Length = 515

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 13/152 (8%)
 Frame = -3

Query: 672 NFLDGLSSAKSLTLSAWVIEVLPRAAEVIPTSFSTRHVKVKTWLSKYSIQGLKYILENSE 493
           NF  GLS A SLTL+   IE+L +   +I   ++ + +++ T L+K ++Q L  +  +  
Sbjct: 338 NFFSGLSHAHSLTLNTQTIEILSKYKFIIQPFYNLKSLELHTSLNKSNVQALACLFRSCP 397

Query: 492 NLESLIVEI-----TKPKVKTAGIWESQEAAE-------VVSACRF-NKLRFVEIRNFQG 352
            L +  +EI      + K+    +W+     E       + S   F   L+ V+I+ F  
Sbjct: 398 TLHTFNLEIINDYKIERKLWNRDLWDMTSTEEEQYWESQIPSLKSFLQHLKVVKIKGFLD 457

Query: 351 YVNELELLKSMLKNAGALEKLTVLTSKNNLPD 256
             NE+ L+K +LK+   LE++ + T  +N  D
Sbjct: 458 CANEVTLVKFLLKHGKGLEEMRLCTGHSNRRD 489


>ref|XP_002316987.1| predicted protein [Populus trichocarpa] gi|222860052|gb|EEE97599.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 9/188 (4%)
 Frame = -3

Query: 810 EYLLEDLLSIDKADIHMEVRKSLFDELEEDMVIPLRRKRTFGVNMVNFLDGLSSAKSLTL 631
           E+LL+D   + KA++  E  ++ FDE+              G+ + + L+ L +A+ LT+
Sbjct: 256 EFLLDDQSDLVKAELDFET-ETAFDEI--------------GLFLCDLLEDLFAAQVLTV 300

Query: 630 SAWVIEVLPRAAEVI--PTSFSTRHVKVKTWLSKYSIQGLKYILENSENLESLIVEITK- 460
            +  ++++P   E +        R++ +KT L      G++++L +  +LE L ++I   
Sbjct: 301 CSVFLQIVPSGNEPLGLQAQIDVRYLILKTALHINEFCGIRFMLRSCPHLEILTIDIGPA 360

Query: 459 ---PKVKTAGIWESQEAAE---VVSACRFNKLRFVEIRNFQGYVNELELLKSMLKNAGAL 298
              P+      +  QE      +V  C    L+ V ++ F+G +NEL +LK +L    A+
Sbjct: 361 NIFPEYGAPYPFNPQEFWSEDLLVEECVTTTLKAVNVKGFKGMMNELNVLKYLLLFGHAM 420

Query: 297 EKLTVLTS 274
           E+LT+  S
Sbjct: 421 EELTLYVS 428


>ref|XP_003540862.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At4g03220-like
           [Glycine max]
          Length = 510

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 13/153 (8%)
 Frame = -3

Query: 675 VNFLDGLSSAKSLTLSAWVIEVLPRAAEVIPTSFSTRHVKVKTWLSKYSIQGLKYILENS 496
           ++ L GLS A+SL+L    IE+L     +    ++ +H+++ T  +K  + GL  + ++S
Sbjct: 332 IDLLSGLSHARSLSLERQTIEILSNNHLLFQPFYNLKHLELHTGFNKSDVPGLTCLFKSS 391

Query: 495 ENLESLIVEI-----TKPKVKTAGIW-------ESQEAAEVVSACRF-NKLRFVEIRNFQ 355
             L++LI++I      + K     +W       E    +++ +   F   L+ V+I  F 
Sbjct: 392 PTLDTLILKIIHEYRIERKEWNRDLWDMTITEGEQYWESQIRTLESFLQHLKVVKIHGFL 451

Query: 354 GYVNELELLKSMLKNAGALEKLTVLTSKNNLPD 256
            Y NE+ L K +LK+  ALE++ + T   N  D
Sbjct: 452 DYENEVALAKFLLKHGKALEEMILHTGHCNARD 484


>ref|XP_002319944.1| f-box family protein [Populus trichocarpa]
           gi|222858320|gb|EEE95867.1| f-box family protein
           [Populus trichocarpa]
          Length = 511

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 16/152 (10%)
 Frame = -3

Query: 681 NMVNFLDGLSSAKSLTLSAWVIEVLPRAAEVIPTSFSTRHVKV---KTWLSKYSIQGLKY 511
           ++ NFL GLS   SLTL +  +E+L    ++I       ++KV    T   K ++ GL +
Sbjct: 324 SVCNFLSGLSHVHSLTLDSQCVEILSNKNDIINLLHPFNNLKVLELHTGFEKNNVPGLAF 383

Query: 510 ILENSENLESLIVEI-----TKPKVKTAGIWESQEAAE------VVSACR--FNKLRFVE 370
           +  +S  L +LI++I     T+ +     +W+   +AE       + A R   + L+ V+
Sbjct: 384 LFRSSPTLHTLILKIINDFKTERRQWNRDLWDLSTSAEEQYWESQLQALRPFLDHLKVVK 443

Query: 369 IRNFQGYVNELELLKSMLKNAGALEKLTVLTS 274
           I  F    NE+ L K +LK+   L+++T+ T+
Sbjct: 444 IHGFLECENEVSLAKFLLKHGKDLQEMTLCTA 475