BLASTX nr result

ID: Coptis25_contig00024455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024455
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532146.1| PREDICTED: aspartic proteinase nepenthesin-1...   112   3e-23
ref|XP_003551807.1| PREDICTED: aspartic proteinase nepenthesin-2...   111   5e-23
ref|XP_002283470.1| PREDICTED: aspartic proteinase nepenthesin-2...   109   3e-22
ref|XP_002324349.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
dbj|BAJ99659.1| predicted protein [Hordeum vulgare subsp. vulgare]    105   4e-21

>ref|XP_003532146.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max]
          Length = 488

 Score =  112 bits (280), Expect = 3e-23
 Identities = 60/138 (43%), Positives = 86/138 (62%), Gaps = 9/138 (6%)
 Frame = -2

Query: 388 EETLANRPHHHQHVIRVKSLLPATSCSEFSPRGKKASKLPIFNKNGPCSPWGNK----QK 221
           E+T +N  H + H++ + SLLP++SCS  +   K+ + L + +K+GPCS   N     + 
Sbjct: 33  EDTESNNLHQYTHLVHLSSLLPSSSCSSSAKGPKRKASLEVVHKHGPCSQLNNHDGKAKS 92

Query: 220 PLNHTEILIQDQGRIHSIQSRIPKG-----GVHSIDSMAATLPVNSGNSLGTGNFIVTIG 56
              H+EIL QD+ R+  I SRI K       V  +DS+  TLP  SG+ +G+GN+ V +G
Sbjct: 93  KTPHSEILNQDKERVKYINSRISKNLGQDSSVSELDSV--TLPAKSGSLIGSGNYFVVVG 150

Query: 55  FGTPKRDLPIIFDTGSDL 2
            GTPKRDL +IFDTGSDL
Sbjct: 151 LGTPKRDLSLIFDTGSDL 168


>ref|XP_003551807.1| PREDICTED: aspartic proteinase nepenthesin-2-like [Glycine max]
          Length = 490

 Score =  111 bits (278), Expect = 5e-23
 Identities = 61/143 (42%), Positives = 87/143 (60%), Gaps = 9/143 (6%)
 Frame = -2

Query: 403 QAYGIEETLANRPHHHQHVIRVKSLLPATSCSEFSPRGKKASKLPIFNKNGPCSPW---- 236
           QA   E+T +N  H + H++ + SLLP++SCS  +   K  + L + +K+GPCS      
Sbjct: 29  QAARKEDTESNNLHQYTHLVHLSSLLPSSSCSSSTKGPKTKASLEVVHKHGPCSQLNDHD 88

Query: 235 GNKQKPLNHTEILIQDQGRIHSIQSRIPKG-----GVHSIDSMAATLPVNSGNSLGTGNF 71
           G  +    H++IL QD+ R+  I SR+ K       V  +DS  ATLP  SG+ +G+GN+
Sbjct: 89  GKAKSTTPHSDILNQDKERVKYINSRLSKNLGQDSSVEELDS--ATLPAKSGSLIGSGNY 146

Query: 70  IVTIGFGTPKRDLPIIFDTGSDL 2
            V +G GTPKRDL +IFDTGSDL
Sbjct: 147 FVVVGLGTPKRDLSLIFDTGSDL 169


>ref|XP_002283470.1| PREDICTED: aspartic proteinase nepenthesin-2-like [Vitis vinifera]
          Length = 490

 Score =  109 bits (272), Expect = 3e-22
 Identities = 61/139 (43%), Positives = 91/139 (65%), Gaps = 7/139 (5%)
 Frame = -2

Query: 397 YGIEETLANRPHHHQ---HVIRVKSLLPATSCSEFSPRGK-KASKLPIFNKNGPCSPWG- 233
           + IE   +   HH Q   H + + SL+P+++CS  SP+G  + + L + +K+GPCS    
Sbjct: 33  FAIEGRESAESHHVQPIHHNVHITSLMPSSACSP-SPKGHDQRASLEVVHKHGPCSKLRP 91

Query: 232 NKQKPLNHTEILIQDQGRIHSIQSRIPKG--GVHSIDSMAATLPVNSGNSLGTGNFIVTI 59
           +K    +HT+IL QD+ R+ SIQSR+ K   G  ++ +  ATLP  S ++LG+GN++VT+
Sbjct: 92  HKANSPSHTQILAQDESRVASIQSRLAKNLAGGSNLKASKATLPSKSASTLGSGNYVVTV 151

Query: 58  GFGTPKRDLPIIFDTGSDL 2
           G G+PKRDL  IFDTGSDL
Sbjct: 152 GLGSPKRDLTFIFDTGSDL 170


>ref|XP_002324349.1| predicted protein [Populus trichocarpa] gi|222865783|gb|EEF02914.1|
           predicted protein [Populus trichocarpa]
          Length = 490

 Score =  106 bits (265), Expect = 2e-21
 Identities = 59/130 (45%), Positives = 79/130 (60%), Gaps = 10/130 (7%)
 Frame = -2

Query: 361 HHQHVIRVKSLLPATSCSE----FSPRGKKASKLPIFNKNGPCSPWGNKQKPL--NHTEI 200
           HH H I V SLLP+ SC       S    KAS L + +K+GPCS     +      HTEI
Sbjct: 44  HHSHSIEVSSLLPSASCKPSTKVLSNNDNKAS-LKVVHKHGPCSKLSQDEASAAPTHTEI 102

Query: 199 LIQDQGRIHSIQSRIPK----GGVHSIDSMAATLPVNSGNSLGTGNFIVTIGFGTPKRDL 32
           L+QDQ R+ SI SR+      GG     + + T+P   G+++G+GN+IVT+G GTPK+DL
Sbjct: 103 LLQDQSRVKSIHSRLSNSKTSGGKDVKVTDSTTIPAKDGSTVGSGNYIVTVGLGTPKKDL 162

Query: 31  PIIFDTGSDL 2
            +IFDTGSD+
Sbjct: 163 SLIFDTGSDI 172


>dbj|BAJ99659.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 484

 Score =  105 bits (262), Expect = 4e-21
 Identities = 55/133 (41%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
 Frame = -2

Query: 385 ETLANRPHHHQ-HVIRVKSLLPATSCSEFSPRGKKASKLPIFNKNGPCSPWGNKQKPLNH 209
           E   +RP H   HV+ V SLLPA +C         +S L + ++ GPCSP   +  P  H
Sbjct: 37  ERRTSRPDHQDWHVVSVASLLPAAACKAPKASASNSSALNVVHRQGPCSPLQARGAPPPH 96

Query: 208 TEILIQDQGRIHSIQSRIPKGGVHSIDSM----AATLPVNSGNSLGTGNFIVTIGFGTPK 41
            E+L  DQ R+ SI  +I       +D        TLP   G SLGTGN++V++G GTP 
Sbjct: 97  AELLNDDQARVDSIHRKIAAAASPVLDQARGKKGVTLPAQRGISLGTGNYVVSMGLGTPA 156

Query: 40  RDLPIIFDTGSDL 2
           RD+ ++FDTGSDL
Sbjct: 157 RDMTVVFDTGSDL 169


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