BLASTX nr result

ID: Coptis25_contig00024446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024446
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276097.2| PREDICTED: uncharacterized protein LOC100253...   102   1e-19
emb|CBI14906.3| unnamed protein product [Vitis vinifera]              102   1e-19
ref|NP_178000.2| uncharacterized protein [Arabidopsis thaliana] ...    97   4e-18
ref|XP_002889209.1| hypothetical protein ARALYDRAFT_316775 [Arab...    97   5e-18
ref|XP_002318691.1| predicted protein [Populus trichocarpa] gi|1...    95   2e-17

>ref|XP_002276097.2| PREDICTED: uncharacterized protein LOC100253596 [Vitis vinifera]
          Length = 323

 Score =  102 bits (254), Expect = 1e-19
 Identities = 57/100 (57%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
 Frame = +3

Query: 249 MENQTT-FDPDLIHAIFKHVWTKKSLERERLEAPENLNNEVEAGTSKKNRPTTANANALK 425
           M+N  T FDPDLIHAIFK VW++ +LERE+ E  + L  EV A TSKKNRPT+ANANALK
Sbjct: 219 MDNANTRFDPDLIHAIFKLVWSRTALEREKNEGADPLECEVGAATSKKNRPTSANANALK 278

Query: 426 LSCELLRSFXXXXXXXXXXXXXXXXXXXXXXTHLERILPQ 545
           LSCELLR F                      THLERILPQ
Sbjct: 279 LSCELLRVFVIEAVERAATIAEAEGVNKIEATHLERILPQ 318


>emb|CBI14906.3| unnamed protein product [Vitis vinifera]
          Length = 179

 Score =  102 bits (254), Expect = 1e-19
 Identities = 57/100 (57%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
 Frame = +3

Query: 249 MENQTT-FDPDLIHAIFKHVWTKKSLERERLEAPENLNNEVEAGTSKKNRPTTANANALK 425
           M+N  T FDPDLIHAIFK VW++ +LERE+ E  + L  EV A TSKKNRPT+ANANALK
Sbjct: 75  MDNANTRFDPDLIHAIFKLVWSRTALEREKNEGADPLECEVGAATSKKNRPTSANANALK 134

Query: 426 LSCELLRSFXXXXXXXXXXXXXXXXXXXXXXTHLERILPQ 545
           LSCELLR F                      THLERILPQ
Sbjct: 135 LSCELLRVFVIEAVERAATIAEAEGVNKIEATHLERILPQ 174


>ref|NP_178000.2| uncharacterized protein [Arabidopsis thaliana]
           gi|22135948|gb|AAM91556.1| unknown protein [Arabidopsis
           thaliana] gi|24899661|gb|AAN65045.1| unknown protein
           [Arabidopsis thaliana] gi|332198032|gb|AEE36153.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 104

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 51/99 (51%), Positives = 60/99 (60%)
 Frame = +3

Query: 249 MENQTTFDPDLIHAIFKHVWTKKSLERERLEAPENLNNEVEAGTSKKNRPTTANANALKL 428
           M+   TFD DLIHAIFKH+W ++  ERER +A +    EV  GT+KKNR  +ANANALKL
Sbjct: 1   MDANNTFDSDLIHAIFKHIWARRFRERERSDAIDATEAEVALGTTKKNRLASANANALKL 60

Query: 429 SCELLRSFXXXXXXXXXXXXXXXXXXXXXXTHLERILPQ 545
           SCELL+SF                      THLERILPQ
Sbjct: 61  SCELLKSFVSEAVQRAAIIAEAEGMEKIEATHLERILPQ 99


>ref|XP_002889209.1| hypothetical protein ARALYDRAFT_316775 [Arabidopsis lyrata subsp.
           lyrata] gi|297335050|gb|EFH65468.1| hypothetical protein
           ARALYDRAFT_316775 [Arabidopsis lyrata subsp. lyrata]
          Length = 104

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 50/99 (50%), Positives = 60/99 (60%)
 Frame = +3

Query: 249 MENQTTFDPDLIHAIFKHVWTKKSLERERLEAPENLNNEVEAGTSKKNRPTTANANALKL 428
           M+   TFD DLIHAIFKH+W ++  ERER +A +    E+  GT+KKNR  +ANANALKL
Sbjct: 1   MDANNTFDSDLIHAIFKHIWARRFRERERSDAIDATEAEIALGTTKKNRLASANANALKL 60

Query: 429 SCELLRSFXXXXXXXXXXXXXXXXXXXXXXTHLERILPQ 545
           SCELL+SF                      THLERILPQ
Sbjct: 61  SCELLKSFVSEAVQRAAIIAEAEGMDKIEATHLERILPQ 99


>ref|XP_002318691.1| predicted protein [Populus trichocarpa] gi|118488565|gb|ABK96095.1|
           unknown [Populus trichocarpa]
           gi|222859364|gb|EEE96911.1| predicted protein [Populus
           trichocarpa]
          Length = 103

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 49/96 (51%), Positives = 59/96 (61%)
 Frame = +3

Query: 258 QTTFDPDLIHAIFKHVWTKKSLERERLEAPENLNNEVEAGTSKKNRPTTANANALKLSCE 437
           + TFDP LI AIFKH+WT+++LERE+ E  +  + EV  GT KK R T+AN+NALKLSCE
Sbjct: 3   EVTFDPGLIQAIFKHIWTRRALEREKNEGNDGTDCEVGTGTLKKTRTTSANSNALKLSCE 62

Query: 438 LLRSFXXXXXXXXXXXXXXXXXXXXXXTHLERILPQ 545
           LLR F                      THLERILPQ
Sbjct: 63  LLRIFITEAVQRSAMIAEAEGAGKIEGTHLERILPQ 98


Top