BLASTX nr result
ID: Coptis25_contig00024445
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024445 (477 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003589063.1| hypothetical protein MTR_1g017990 [Medicago ... 47 2e-08 ref|XP_004164025.1| PREDICTED: uncharacterized protein LOC101232... 52 3e-08 ref|XP_002320028.1| predicted protein [Populus trichocarpa] gi|2... 59 4e-07 ref|XP_002285345.1| PREDICTED: uncharacterized protein LOC100259... 56 3e-06 >ref|XP_003589063.1| hypothetical protein MTR_1g017990 [Medicago truncatula] gi|355478111|gb|AES59314.1| hypothetical protein MTR_1g017990 [Medicago truncatula] Length = 285 Score = 47.0 bits (110), Expect(2) = 2e-08 Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 22/122 (18%) Frame = -2 Query: 476 SVLADLEEMKQKIYQNMGSDQEDSLMVRFGYSNAKDWIPIVVKLRDHEKQDK-------- 321 ++L+DL + +QKIY M + D VRF +SN D++PIVVK+++ ++ K Sbjct: 50 ALLSDLNDKRQKIYSQM--NPHDISFVRFVHSNKDDFVPIVVKVKNKSQELKVVKPRNLS 107 Query: 320 PNHVGRKLNSKGSIMNVKKNNSMLQTAGNYNWLM--------------VVVLVIILSCME 183 P +K + + SI+ +++ N Q +W M VV+++++L + Sbjct: 108 PKSTVKKSSPESSIVAMEERN---QPKKRISWNMKNNEMEKPLFYLPFVVIMILVLLTVF 164 Query: 182 GR 177 GR Sbjct: 165 GR 166 Score = 36.2 bits (82), Expect(2) = 2e-08 Identities = 15/40 (37%), Positives = 27/40 (67%) Frame = -1 Query: 198 IIMYGRSFAVVCTSI*WYFLPTFKHGDMNLTRSIKEKEYI 79 + ++GR+ A++ T I WY +PT K D+ SIK+K+++ Sbjct: 161 LTVFGRTAAIIFTCILWYVIPTLK--DIKARNSIKKKDFV 198 >ref|XP_004164025.1| PREDICTED: uncharacterized protein LOC101232670 [Cucumis sativus] Length = 212 Score = 52.4 bits (124), Expect(2) = 3e-08 Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 13/113 (11%) Frame = -2 Query: 476 SVLADLEEMKQKIYQNMGSDQEDSLMVRFGYSNAKDWIPIVVKLRDHEKQDKPNH----- 312 ++L DL+E ++KIY +D E+ +MVRF Y N+ + +P+VVK +D +++ + Sbjct: 41 ALLTDLDEKRKKIYSQ--TDPEEIVMVRFAYKNSDECVPVVVKQKDKKEEKNTSDDSETM 98 Query: 311 -VGRKLNSKGSIMNVKKNNSMLQTAG-------NYNWLMVVVLVIILSCMEGR 177 + + SK S N K NN+ ++ +Y VV+L++ L + GR Sbjct: 99 AIKKPKQSKESTAN-KNNNNFVRARNLRRLNKPSYYIAAVVILILFLLSIFGR 150 Score = 30.4 bits (67), Expect(2) = 3e-08 Identities = 15/49 (30%), Positives = 31/49 (63%) Frame = -1 Query: 192 MYGRSFAVVCTSI*WYFLPTFKHGDMNLTRSIKEKEYIGRVTRP*RIEE 46 ++GRS ++CT I WY +P K +L++S ++ + R++ P ++E+ Sbjct: 147 IFGRSVTILCTCIAWYLVPVLK---QSLSKSRRKGKV--RISIPNKMEK 190 >ref|XP_002320028.1| predicted protein [Populus trichocarpa] gi|222860801|gb|EEE98343.1| predicted protein [Populus trichocarpa] Length = 273 Score = 58.9 bits (141), Expect = 4e-07 Identities = 35/80 (43%), Positives = 50/80 (62%) Frame = -2 Query: 476 SVLADLEEMKQKIYQNMGSDQEDSLMVRFGYSNAKDWIPIVVKLRDHEKQDKPNHVGRKL 297 ++LA+LEE KQKIY MG ED MVRF YS++ D IP+++K++D +KQDKP Sbjct: 73 ALLAELEEKKQKIYSQMGP--EDVPMVRFVYSSSNDCIPLIIKVKD-QKQDKPR------ 123 Query: 296 NSKGSIMNVKKNNSMLQTAG 237 GS ++K+N + G Sbjct: 124 --IGSANDIKENPNTRNNEG 141 >ref|XP_002285345.1| PREDICTED: uncharacterized protein LOC100259057 [Vitis vinifera] Length = 250 Score = 55.8 bits (133), Expect = 3e-06 Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%) Frame = -2 Query: 476 SVLADLEEMKQKIYQNMGSDQEDSLMVRFGYSNAKDWIPIVVKLRDHEKQD-KPNHV 309 ++LADLEE +Q+IY +GS +D VRF YSN+ D +PIVVKLRD + ++ K N+V Sbjct: 51 ALLADLEEKRQQIYSQVGS--QDISFVRFAYSNSNDCVPIVVKLRDKKLENIKDNNV 105