BLASTX nr result

ID: Coptis25_contig00024438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024438
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29933.3| unnamed protein product [Vitis vinifera]               61   8e-08
ref|XP_002276958.1| PREDICTED: uncharacterized protein LOC100262...    61   8e-08
emb|CAN71660.1| hypothetical protein VITISV_016185 [Vitis vinifera]    61   8e-08
ref|XP_002525438.1| conserved hypothetical protein [Ricinus comm...    56   3e-06

>emb|CBI29933.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
 Frame = +2

Query: 8   YVKDATLEALQTATVIIREKGSRREKS-GSITDTDCLRRSNFRNKSLWSSRDASVVPALP 184
           YV+ A  EALQTA  ++ EKGS+ +K  G    ++ +R  + + K+L S+ D S     P
Sbjct: 385 YVRGAAYEALQTARRVVSEKGSKFDKDMGLFAGSNVVRGDHIQRKNLLSNGDQSPFSGSP 444

Query: 185 VYSPIDS----DFSAEPAASTAQVSYNSDYGGRYLNRRYWEKDMTGVNASLK 328
               +DS    +   E   ST QVS N DY     NR+ W     GV+ SLK
Sbjct: 445 ESQTLDSFVEYESLIESPISTRQVSRNLDYDRGSANRKLWRYGNGGVDVSLK 496


>ref|XP_002276958.1| PREDICTED: uncharacterized protein LOC100262437 [Vitis vinifera]
          Length = 615

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
 Frame = +2

Query: 8   YVKDATLEALQTATVIIREKGSRREKS-GSITDTDCLRRSNFRNKSLWSSRDASVVPALP 184
           YV+ A  EALQTA  ++ EKGS+ +K  G    ++ +R  + + K+L S+ D S     P
Sbjct: 277 YVRGAAYEALQTARRVVSEKGSKFDKDMGLFAGSNVVRGDHIQRKNLLSNGDQSPFSGSP 336

Query: 185 VYSPIDS----DFSAEPAASTAQVSYNSDYGGRYLNRRYWEKDMTGVNASLK 328
               +DS    +   E   ST QVS N DY     NR+ W     GV+ SLK
Sbjct: 337 ESQTLDSFVEYESLIESPISTRQVSRNLDYDRGSANRKLWRYGNGGVDVSLK 388


>emb|CAN71660.1| hypothetical protein VITISV_016185 [Vitis vinifera]
          Length = 615

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
 Frame = +2

Query: 8   YVKDATLEALQTATVIIREKGSRREKS-GSITDTDCLRRSNFRNKSLWSSRDASVVPALP 184
           YV+ A  EALQTA  ++ EKGS+ +K  G    ++ +R  + + K+L S+ D S     P
Sbjct: 277 YVRGAAYEALQTARRVVSEKGSKFDKDMGLFAGSNVVRGDHIQRKNLLSNGDQSPFSGSP 336

Query: 185 VYSPIDS----DFSAEPAASTAQVSYNSDYGGRYLNRRYWEKDMTGVNASLK 328
               +DS    +   E   ST QVS N DY     NR+ W     GV+ SLK
Sbjct: 337 ESQTLDSFVEYESLIESPISTRQVSRNLDYDRGSANRKLWRYGNGGVDVSLK 388


>ref|XP_002525438.1| conserved hypothetical protein [Ricinus communis]
           gi|223535251|gb|EEF36928.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 603

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
 Frame = +2

Query: 8   YVKDATLEALQTATVIIREKGSRREKSG-SITDTDCLRRSNFRNKSLWSSRDASVVPALP 184
           YV  A  EALQTA  I  +KG + +KS  S+T ++  RR +   ++L S  + S     P
Sbjct: 277 YVSGAAFEALQTAKKISTDKGLKFDKSPVSVTGSNFGRRDHRGRRNLSSPGNHSPTSVSP 336

Query: 185 VYSPIDS----DFSAEPAASTAQVSYNSDYGGRYLNRRYWEKDMTGVNASLK 328
               +DS    D  A+   S+ Q+S+N +Y  R +NR+ W  +   V+ SL+
Sbjct: 337 ESQTLDSFIEYDSLADSPVSSTQISHNMEYDRRSVNRKLWSYENGQVDVSLR 388


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