BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024431
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_002528143.1| pentatricopeptide repeat-containing protein,...    77   1e-12
ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
emb|CBI27232.3| unnamed protein product [Vitis vinifera]               70   2e-10

>ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|222842032|gb|EEE79579.1|
           predicted protein [Populus trichocarpa]
          Length = 641

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/70 (57%), Positives = 55/70 (78%)
 Frame = +2

Query: 101 HKNEDEDDYITESQQPLAPEIFRSCPKLGSYKQGDSTFYSLIENFASLGDFTSLERVLDR 280
           H+N  + ++  E   P++ +IF+S PK+GSYK GDSTFYSLI+N+A+LGDF SLE+VLDR
Sbjct: 26  HRNASDREHGIEHDPPISDKIFKSGPKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVLDR 85

Query: 281 MKHEQRVFNE 310
           M+ E+RV  E
Sbjct: 86  MRCEKRVVVE 95


>ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|222845175|gb|EEE82722.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/71 (56%), Positives = 53/71 (74%)
 Frame = +2

Query: 98  KHKNEDEDDYITESQQPLAPEIFRSCPKLGSYKQGDSTFYSLIENFASLGDFTSLERVLD 277
           +H N  + +   E   P++ +IF+S PK+GSY+ GDSTFYSLI N+A+LGDF SLE+VLD
Sbjct: 55  QHCNTTDQENGIEPDPPISDKIFKSGPKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLD 114

Query: 278 RMKHEQRVFNE 310
           RMK E+RV  E
Sbjct: 115 RMKCEKRVIFE 125


>ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532441|gb|EEF34234.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 653

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/70 (52%), Positives = 51/70 (72%)
 Frame = +2

Query: 101 HKNEDEDDYITESQQPLAPEIFRSCPKLGSYKQGDSTFYSLIENFASLGDFTSLERVLDR 280
           ++N D ++       P++ +IF S PK+GS+K GDSTFYSLIEN+A   DF SLE+VL+R
Sbjct: 38  NQNNDLENGSEPESSPISDKIFSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKVLNR 97

Query: 281 MKHEQRVFNE 310
           M+ E RVF+E
Sbjct: 98  MRLENRVFSE 107


>ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/59 (61%), Positives = 46/59 (77%)
 Frame = +2

Query: 134 ESQQPLAPEIFRSCPKLGSYKQGDSTFYSLIENFASLGDFTSLERVLDRMKHEQRVFNE 310
           ES  P+  +IF+S  ++GSYK GDSTFYSLIEN+A+ GDF +L +V DRMK E+RVF E
Sbjct: 41  ESDAPIPDQIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIE 99


>emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/50 (66%), Positives = 41/50 (82%)
 Frame = +2

Query: 161 IFRSCPKLGSYKQGDSTFYSLIENFASLGDFTSLERVLDRMKHEQRVFNE 310
           IF+S  ++GSYK GDSTFYSLIEN+A+ GDF +L +V DRMK E+RVF E
Sbjct: 66  IFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIE 115