BLASTX nr result

ID: Coptis25_contig00024427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024427
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137882.1| PREDICTED: ABC transporter C family member 1...   204   1e-50
emb|CAN82851.1| hypothetical protein VITISV_027998 [Vitis vinifera]   195   1e-47
emb|CAN62019.1| hypothetical protein VITISV_019561 [Vitis vinifera]   193   4e-47
ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795...   192   1e-46
emb|CAN73399.1| hypothetical protein VITISV_006541 [Vitis vinifera]   190   3e-46

>ref|XP_004137882.1| PREDICTED: ABC transporter C family member 13-like [Cucumis sativus]
          Length = 2377

 Score =  204 bits (520), Expect = 1e-50
 Identities = 117/270 (43%), Positives = 156/270 (57%)
 Frame = +1

Query: 4    SCVKTPQQNG*SERKNRHILNLARAISIGMNIPKIFWADAVFTAVQMINRTPSRLLQFKT 183
            SC  TP QNG +ERKNRH+L  A A+S  M++ KIFW DAV TA  +INR PS +L  + 
Sbjct: 1161 SCADTPSQNGVAERKNRHLLETAHALSFQMHVSKIFWVDAVSTACFLINRMPSSVLNGEI 1220

Query: 184  PHSALYPTSPLFLIPPKVFGCVCFVQNMSRDCTKLDPRSLKCVFLGYAHSQKGYRCYHPP 363
            P+  L+PT  LF I PK+FGCVCFV+++    TKLDP+SLKC+FLGY+  QKGYRCY P 
Sbjct: 1221 PYRVLFPTKHLFPIAPKIFGCVCFVRDVRPHHTKLDPKSLKCIFLGYSRVQKGYRCYCPT 1280

Query: 364  SRRFLVSMDVTFF*HEAYFQGAVESPGEWFNSMVSDPPLFPVASIPLPVMCEDSPDTKSA 543
             +R+LVS DV FF    +      SP         +  ++ V S P P +  D P ++  
Sbjct: 1281 LKRYLVSPDVVFFEDTPF----TSSPSSLCQREDDNLFIYEVTS-PTPSLSTDVPPSRPL 1335

Query: 544  PTSVSNDGPPLKVYARRKNRLKTTSSPYCQVTSSPDPEKLKSTAPTECQVTPAPDPMLGL 723
             +         +VY+RR     + S P   + SS DP      AP++             
Sbjct: 1336 IS---------QVYSRRPPPQPSDSCPPSMLPSSCDP------APSD------------- 1367

Query: 724  NDRPIAIRKERRKCTYPISNYVSYHALSPS 813
             D  IA+RK +RKCTYP+S+++SYH LSPS
Sbjct: 1368 -DLSIALRKGKRKCTYPVSSFISYHQLSPS 1396


>emb|CAN82851.1| hypothetical protein VITISV_027998 [Vitis vinifera]
          Length = 1239

 Score =  195 bits (495), Expect = 1e-47
 Identities = 113/284 (39%), Positives = 164/284 (57%), Gaps = 13/284 (4%)
 Frame = +1

Query: 4    SCVKTPQQNG*SERKNRHILNLARAISIGMNIPKIFWADAVFTAVQMINRTPSRLLQFKT 183
            SCV TPQQNG +ERKNRH+L +AR++   MN+PK+FW  AV TA  +INR PSR+L+F+T
Sbjct: 461  SCVDTPQQNGIAERKNRHLLEVARSLMFSMNVPKLFWEQAVLTAAYLINRMPSRVLKFQT 520

Query: 184  PHSAL---YPTSPLF-LIPPKVFGCVCFVQNMSRDCTKLDPRSLKCVFLGYAHSQKGYRC 351
            P   L   +PT+ L   +PPK+FGC  FV    +  +KLDPRSLKC+FLGY+ +QKGY+C
Sbjct: 521  PCQTLLKSFPTTRLISTVPPKIFGCFVFVHINQQHRSKLDPRSLKCIFLGYSSNQKGYKC 580

Query: 352  YHPPSRRFLVSMDVTFF*HEAYF-------QGAVESPGEWFNSMVSDPPLFPVASIPLPV 510
            Y P +R+F  SMDVTFF  + Y+       + + +    W     S+ P+     IP   
Sbjct: 581  YSPVTRKFYNSMDVTFFETQPYYPKNDIQGENSTQEYQFWNLESFSESPITTENHIP--- 637

Query: 511  MCEDSPDTKSAPTSVSNDGPPLKVYARRKNRLKTTSSPYCQVTSSPDPEKLK-STAPTEC 687
                 P++ + P S+ +     K + + +   +  S    +    P+P KL  + AP   
Sbjct: 638  -----PESFNQPESIVDLWD--KEHIQEETEXRALSQQTHEAEPGPNPSKLPGNNAPDGT 690

Query: 688  QVTPAPDPMLGLNDRPIAIRKERRKCT-YPISNYVSYHALSPSY 816
              +   + +L +   PIA RK  R CT +PI N++SY  LSP++
Sbjct: 691  XDSELENDILNM---PIAXRKGVRSCTQHPIGNFISYDKLSPTF 731


>emb|CAN62019.1| hypothetical protein VITISV_019561 [Vitis vinifera]
          Length = 692

 Score =  193 bits (490), Expect = 4e-47
 Identities = 113/284 (39%), Positives = 164/284 (57%), Gaps = 13/284 (4%)
 Frame = +1

Query: 4   SCVKTPQQNG*SERKNRHILNLARAISIGMNIPKIFWADAVFTAVQMINRTPSRLLQFKT 183
           SCV TPQQNG +ERKNRH+L +AR++   MN+PK+FW  AV TA  +INR PSR+L+F+T
Sbjct: 40  SCVDTPQQNGIAERKNRHLLEVARSLMFSMNVPKLFWGQAVLTAAYLINRMPSRVLKFQT 99

Query: 184 PHSAL---YPTSPLF-LIPPKVFGCVCFVQNMSRDCTKLDPRSLKCVFLGYAHSQKGYRC 351
           P   L   +PT+ L   +PPK+FGC  FV    +  +KLDPRSLKC+FLGY+ +QKGY+C
Sbjct: 100 PCQTLLKSFPTTRLISTVPPKIFGCSVFVHINQQHRSKLDPRSLKCIFLGYSSNQKGYKC 159

Query: 352 YHPPSRRFLVSMDVTFF*HEAYF-------QGAVESPGEWFNSMVSDPPLFPVASIPLPV 510
           Y P +R+F  SMDVTFF  + Y+       + + +    W     S+ P+     IP   
Sbjct: 160 YSPVTRKFYNSMDVTFFETQPYYPKNDIQGENSTQEYQFWDLESFSESPITTENHIP--- 216

Query: 511 MCEDSPDTKSAPTSVSNDGPPLKVYARRKNRLKTTSSPYCQVTSSPDPEKLK-STAPTEC 687
                P++ + P S+ +     K + + +   +  S    +    P+P KL  + AP   
Sbjct: 217 -----PESFNQPESIVDLWD--KEHIQEETEERALSQQTHEAEPGPNPSKLPGNNAPDGT 269

Query: 688 QVTPAPDPMLGLNDRPIAIRKERRKCT-YPISNYVSYHALSPSY 816
             +   + +L +   PIA RK  R CT +PI N++SY  LSP++
Sbjct: 270 VDSELENDILNM---PIAWRKGVRSCTQHPIGNFISYDKLSPTF 310


>ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795634 [Glycine max]
          Length = 1815

 Score =  192 bits (487), Expect = 1e-46
 Identities = 112/273 (41%), Positives = 153/273 (56%), Gaps = 2/273 (0%)
 Frame = +1

Query: 4    SCVKTPQQNG*SERKNRHILNLARAISIGMNIPKIFWADAVFTAVQMINRTPSRLLQFKT 183
            +C  TPQQNG +ERKNRH+L  AR++ +  N+P   W DAV TA  +INR PS  L+ + 
Sbjct: 732  TCPHTPQQNGIAERKNRHLLETARSLMLNSNVPTHHWGDAVLTACFLINRMPSSSLENQI 791

Query: 184  PHSALYPTSPLFLIPPKVFGCVCFVQNMSRDCTKLDPRSLKCVFLGYAHSQKGYRCYHPP 363
            PHS ++P  PLF + PKVFGC CFV ++S    KL  RS+KCVFLGY+  QKGY+CY P 
Sbjct: 792  PHSIVFPHDPLFHVSPKVFGCTCFVHDLSPGLDKLSARSVKCVFLGYSRLQKGYKCYSPT 851

Query: 364  SRRFLVSMDVTFF*HEAYFQGAVESPGEWFNSMVSDPPLFPVASIPLPVMCEDSPDTKSA 543
             RR+ +S DVTFF    +F  +V+          S   + P++S P P+   D  + +  
Sbjct: 852  MRRYYMSADVTFFEDTPFFSSSVDHSS-------SLQEVLPISS-PCPLDNSDH-NVRVV 902

Query: 544  PTSVSNDGPPLKVYARRKNRLKTTSSPYCQVTSSPDPEKLKSTAPTECQVTPAPDPMLGL 723
            P S     PP      R  ++    SP  +  SS DP    ++ P     + +  P    
Sbjct: 903  PNSPEVISPPSVTDPPRTRQI---GSPVPE-ASSRDPRSSSTSPPLMDPSSSSTSPSHSD 958

Query: 724  NDRPIAIRKERR--KCTYPISNYVSYHALSPSY 816
            +  PIAIRK  R  +  +PI N++SYH LSPSY
Sbjct: 959  SHWPIAIRKGTRSTRNPHPIYNFLSYHRLSPSY 991


>emb|CAN73399.1| hypothetical protein VITISV_006541 [Vitis vinifera]
          Length = 834

 Score =  190 bits (483), Expect = 3e-46
 Identities = 112/284 (39%), Positives = 163/284 (57%), Gaps = 13/284 (4%)
 Frame = +1

Query: 4   SCVKTPQQNG*SERKNRHILNLARAISIGMNIPKIFWADAVFTAVQMINRTPSRLLQFKT 183
           SCV TPQQNG +ERKNRH+L +AR++   MN+PK+FW  AV TA  +INR  SR+L+F+T
Sbjct: 40  SCVDTPQQNGIAERKNRHLLEVARSLMFSMNVPKLFWGQAVLTAAYLINRMXSRVLKFQT 99

Query: 184 PHSAL---YPTSPLF-LIPPKVFGCVCFVQNMSRDCTKLDPRSLKCVFLGYAHSQKGYRC 351
           P   L   +PT+ L   +PPK+FGC  FV    +  +KLDPRSLKC+FLGY+ +QKGY+C
Sbjct: 100 PCQTLLKSFPTTRLISTVPPKIFGCSVFVHINQQHRSKLDPRSLKCIFLGYSSNQKGYKC 159

Query: 352 YHPPSRRFLVSMDVTFF*HEAYF-------QGAVESPGEWFNSMVSDPPLFPVASIPLPV 510
           Y P +R+F  SMDVTFF  + Y+       + + +    W     S+ P+     IP   
Sbjct: 160 YSPVTRKFYNSMDVTFFETQPYYPKNDIQGENSTQEYQFWDLESFSESPITTENHIP--- 216

Query: 511 MCEDSPDTKSAPTSVSNDGPPLKVYARRKNRLKTTSSPYCQVTSSPDPEKLK-STAPTEC 687
                P++ + P S+ +     K + + +   +  S    +    P+P KL  + AP   
Sbjct: 217 -----PESFNQPESIVDLWD--KEHIQEETEERALSQQTHEAKPGPNPSKLPGNNAPDGT 269

Query: 688 QVTPAPDPMLGLNDRPIAIRKERRKCT-YPISNYVSYHALSPSY 816
             +   + +L +   PIA RK  R CT +PI N++SY  LSP++
Sbjct: 270 XDSELENDILNM---PIAWRKGVRSCTQHPIGNFISYDKLSPTF 310


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