BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024426
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278510.1| PREDICTED: nifU-like protein 1, chloroplasti...   239   8e-61
ref|XP_004135981.1| PREDICTED: nifU-like protein 1, chloroplasti...   225   9e-57
gb|AFK34471.1| unknown [Lotus japonicus]                              222   7e-56
gb|EEC75119.1| hypothetical protein OsI_11301 [Oryza sativa Indi...   222   1e-55
gb|EEE58942.1| hypothetical protein OsJ_10617 [Oryza sativa Japo...   219   5e-55

>ref|XP_002278510.1| PREDICTED: nifU-like protein 1, chloroplastic [Vitis vinifera]
           gi|297744011|emb|CBI36981.3| unnamed protein product
           [Vitis vinifera]
          Length = 213

 Score =  239 bits (609), Expect = 8e-61
 Identities = 132/212 (62%), Positives = 148/212 (69%), Gaps = 1/212 (0%)
 Frame = -3

Query: 842 LSLITTSGLLQNPLISNTQTS-KSYKNTIFITFKGHRTNDSKKQASLKVAFKTNATGGLY 666
           ++ +T +GL QN     ++TS K  KN   +  K  RT   +           + + GLY
Sbjct: 1   MASLTATGLSQNSAFRLSKTSVKPQKNQPIVRLKPLRTVLQRTAIKASNPSAPSGSPGLY 60

Query: 665 SAETFELSAKNVDFVLEDVRPYLXXXXXXXXXXXXXXXXXSLKLQGACGSCPSSTTTMKM 486
           SA  FEL+AKNVD VLEDVRPYL                 SLKLQGACGSCPSSTTTM M
Sbjct: 61  SAHKFELTAKNVDLVLEDVRPYLISDGGNVDVVSVEDGVISLKLQGACGSCPSSTTTMTM 120

Query: 485 GIERVLKEKFGDAVKDIRQVFDELENEVTVEAVNGHLDILRPAIKNYGGSVEVLSIDGGD 306
           GIERVLKEKFGDAVKDIRQV+DE   E TVEAVN HLDILRPAIKNYG SV+VLSI+GGD
Sbjct: 121 GIERVLKEKFGDAVKDIRQVYDEQTGETTVEAVNRHLDILRPAIKNYGSSVDVLSIEGGD 180

Query: 305 CHVKYVGPDSIGSGIKAAIKEKFPDIVNVVLT 210
           C VKY GP+SIGSGIKAAIKEKFPDIVNVV +
Sbjct: 181 CLVKYTGPESIGSGIKAAIKEKFPDIVNVVFS 212


>ref|XP_004135981.1| PREDICTED: nifU-like protein 1, chloroplastic-like [Cucumis
           sativus] gi|449515245|ref|XP_004164660.1| PREDICTED:
           nifU-like protein 1, chloroplastic-like [Cucumis
           sativus]
          Length = 220

 Score =  225 bits (574), Expect = 9e-57
 Identities = 126/221 (57%), Positives = 153/221 (69%), Gaps = 9/221 (4%)
 Frame = -3

Query: 842 LSLITTSGLLQNPLISNTQTSKSYKNTIFITFKGHRTNDSKKQASLKVAFK--------- 690
           ++ +TTSGLL+ PL ++   + S +   F  +  H+   S K+A    A +         
Sbjct: 1   MASLTTSGLLKTPLKNSQSPANSLQYPPF-AYGQHQLPVSLKRAFPGRAIRASPSNSGPS 59

Query: 689 TNATGGLYSAETFELSAKNVDFVLEDVRPYLXXXXXXXXXXXXXXXXXSLKLQGACGSCP 510
           T ++ GLYSA+ FEL+  NVD VLEDVRPYL                 SLKL GACGSCP
Sbjct: 60  TTSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLKLVGACGSCP 119

Query: 509 SSTTTMKMGIERVLKEKFGDAVKDIRQVFDELENEVTVEAVNGHLDILRPAIKNYGGSVE 330
           SSTTTMKMGIERVLKEKFGD+VK+I QV+DE   E T EAVN HLDILRPAI+NYGGSVE
Sbjct: 120 SSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVE 179

Query: 329 VLSIDGGDCHVKYVGPDSIGSGIKAAIKEKFPDIVNVVLTS 207
           V+SI+GGDC VKY GP+SIG+G+KAAIKE+FPDI NVV +S
Sbjct: 180 VISINGGDCLVKYEGPESIGTGVKAAIKERFPDITNVVFSS 220


>gb|AFK34471.1| unknown [Lotus japonicus]
          Length = 225

 Score =  222 bits (566), Expect = 7e-56
 Identities = 120/185 (64%), Positives = 137/185 (74%), Gaps = 9/185 (4%)
 Frame = -3

Query: 734 TNDSKKQAS-LKVAFKTNA--------TGGLYSAETFELSAKNVDFVLEDVRPYLXXXXX 582
           TN +K+ +S ++ A  TN         + GLYSA  F+L+A NVD VLEDVRPYL     
Sbjct: 33  TNFTKRTSSTIRFASSTNQNQSSSSSPSPGLYSAAKFDLTAPNVDLVLEDVRPYLISDGG 92

Query: 581 XXXXXXXXXXXXSLKLQGACGSCPSSTTTMKMGIERVLKEKFGDAVKDIRQVFDELENEV 402
                       SLKLQGAC SCPSSTTTMK+GIERVLKEKFGDAVKDI QV+DE   E 
Sbjct: 93  NVEVVSVENGVISLKLQGACESCPSSTTTMKLGIERVLKEKFGDAVKDIVQVYDEEPKET 152

Query: 401 TVEAVNGHLDILRPAIKNYGGSVEVLSIDGGDCHVKYVGPDSIGSGIKAAIKEKFPDIVN 222
           TVEAVN HL+ILRPAIKN+GGSV+VLS++G DCHV YVGPDSIGSGIKAAIKEKFPDI+N
Sbjct: 153 TVEAVNNHLEILRPAIKNFGGSVQVLSVEGSDCHVDYVGPDSIGSGIKAAIKEKFPDILN 212

Query: 221 VVLTS 207
           V  T+
Sbjct: 213 VTFTT 217


>gb|EEC75119.1| hypothetical protein OsI_11301 [Oryza sativa Indica Group]
          Length = 288

 Score =  222 bits (565), Expect = 1e-55
 Identities = 115/168 (68%), Positives = 133/168 (79%), Gaps = 2/168 (1%)
 Frame = -3

Query: 683 ATGGLYSAETFELSAKNVDFVLEDVRPYLXXXXXXXXXXXXXXXXXSLKLQGACGSCPSS 504
           A GGLYSAET+EL+A+NVD VL+DVRPYL                 SLKL+GACGSCPSS
Sbjct: 64  AGGGLYSAETYELTAENVDRVLDDVRPYLIADGGDVTVASVEDGVISLKLEGACGSCPSS 123

Query: 503 TTTMKMGIERVLKEKFGDAVKDIRQVFDELEN--EVTVEAVNGHLDILRPAIKNYGGSVE 330
           TTTMKMGIERVLKEKFGDAVKDIRQVFD+ +   E T +AVNGHLDILRPAI NYGGSVE
Sbjct: 124 TTTMKMGIERVLKEKFGDAVKDIRQVFDDDQQPAETTPQAVNGHLDILRPAIANYGGSVE 183

Query: 329 VLSIDGGDCHVKYVGPDSIGSGIKAAIKEKFPDIVNVVLTS*IADTKL 186
           V+++DG DC V+Y GP+SIGSGIKAAIKEKFPDI NVV    + ++++
Sbjct: 184 VVAVDGEDCLVRYEGPESIGSGIKAAIKEKFPDITNVVFLQFVTESQM 231


>gb|EEE58942.1| hypothetical protein OsJ_10617 [Oryza sativa Japonica Group]
          Length = 224

 Score =  219 bits (559), Expect = 5e-55
 Identities = 115/158 (72%), Positives = 128/158 (81%), Gaps = 2/158 (1%)
 Frame = -3

Query: 683 ATGGLYSAETFELSAKNVDFVLEDVRPYLXXXXXXXXXXXXXXXXXSLKLQGACGSCPSS 504
           A GGLYSAET+EL+A+NVD VL+DVRPYL                 SLKL+GACGSCPSS
Sbjct: 64  AGGGLYSAETYELTAENVDRVLDDVRPYLIADGGDVTVASVEDGVISLKLEGACGSCPSS 123

Query: 503 TTTMKMGIERVLKEKFGDAVKDIRQVFDELEN--EVTVEAVNGHLDILRPAIKNYGGSVE 330
           TTTMKMGIERVLKEKFGDAVKDIRQVFD+ +   E T +AVNGHLDILRPAI NYGGSVE
Sbjct: 124 TTTMKMGIERVLKEKFGDAVKDIRQVFDDDQQPAEPTPQAVNGHLDILRPAIANYGGSVE 183

Query: 329 VLSIDGGDCHVKYVGPDSIGSGIKAAIKEKFPDIVNVV 216
           V+++DG DC V+Y GP+SIGSGIKAAIKEKFPDI NVV
Sbjct: 184 VVAVDGEDCLVRYEGPESIGSGIKAAIKEKFPDITNVV 221