BLASTX nr result

ID: Coptis25_contig00024424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024424
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis] gi...    91   8e-17
ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...    85   5e-15
emb|CBI35950.3| unnamed protein product [Vitis vinifera]               85   5e-15
emb|CAN63206.1| hypothetical protein VITISV_010618 [Vitis vinifera]    85   5e-15
ref|XP_002327435.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14

>ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis]
           gi|223533215|gb|EEF34971.1| Protein SEY1, putative
           [Ricinus communis]
          Length = 813

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 45/90 (50%), Positives = 64/90 (71%)
 Frame = +1

Query: 1   VRTTERHRLEAKVLELMQPAYHSMLAHLRSQTLDDFKDAFYKARNRNRGETTAVAAYDCM 180
           VR+ +R +LE K+L+L+QPA+ SML H+RS TLD FK+AF KA     GE  + AAY C 
Sbjct: 350 VRSAKRKQLEEKLLQLVQPAHQSMLGHIRSGTLDKFKEAFDKA--LAAGEGFSSAAYSCT 407

Query: 181 IHFMSVFDEGCTDVDMKEANWDQARAERNL 270
            ++M+VFDEGCTD  +++A+WD ++    L
Sbjct: 408 QYYMTVFDEGCTDAIIEQASWDTSKVRDKL 437


>ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Vitis
           vinifera]
          Length = 871

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/90 (48%), Positives = 60/90 (66%)
 Frame = +1

Query: 1   VRTTERHRLEAKVLELMQPAYHSMLAHLRSQTLDDFKDAFYKARNRNRGETTAVAAYDCM 180
           VR+ +R +LEAK+L+L+QPAY  ML H+RS TLD FK+AF KA   + GE  AVA + C 
Sbjct: 408 VRSAKREQLEAKLLQLVQPAYQLMLGHIRSGTLDKFKEAFDKA--LSGGEGFAVATHGCT 465

Query: 181 IHFMSVFDEGCTDVDMKEANWDQARAERNL 270
              M+ FDE C D  +++ANWD ++    L
Sbjct: 466 KAVMTQFDEECADAVIEQANWDTSKVRDKL 495


>emb|CBI35950.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/90 (48%), Positives = 60/90 (66%)
 Frame = +1

Query: 1   VRTTERHRLEAKVLELMQPAYHSMLAHLRSQTLDDFKDAFYKARNRNRGETTAVAAYDCM 180
           VR+ +R +LEAK+L+L+QPAY  ML H+RS TLD FK+AF KA   + GE  AVA + C 
Sbjct: 566 VRSAKREQLEAKLLQLVQPAYQLMLGHIRSGTLDKFKEAFDKA--LSGGEGFAVATHGCT 623

Query: 181 IHFMSVFDEGCTDVDMKEANWDQARAERNL 270
              M+ FDE C D  +++ANWD ++    L
Sbjct: 624 KAVMTQFDEECADAVIEQANWDTSKVRDKL 653


>emb|CAN63206.1| hypothetical protein VITISV_010618 [Vitis vinifera]
          Length = 857

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/90 (48%), Positives = 60/90 (66%)
 Frame = +1

Query: 1   VRTTERHRLEAKVLELMQPAYHSMLAHLRSQTLDDFKDAFYKARNRNRGETTAVAAYDCM 180
           VR+ +R +LEAK+L+L+QPAY  ML H+RS TLD FK+AF KA   + GE  AVA + C 
Sbjct: 429 VRSAKREQLEAKLLQLVQPAYQLMLGHIRSGTLDKFKEAFDKA--LSGGEGFAVATHGCT 486

Query: 181 IHFMSVFDEGCTDVDMKEANWDQARAERNL 270
              M+ FDE C D  +++ANWD ++    L
Sbjct: 487 KAVMTQFDEECADAVIEQANWDTSKVRDKL 516


>ref|XP_002327435.1| predicted protein [Populus trichocarpa] gi|222835989|gb|EEE74410.1|
           predicted protein [Populus trichocarpa]
          Length = 716

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/90 (46%), Positives = 61/90 (67%)
 Frame = +1

Query: 1   VRTTERHRLEAKVLELMQPAYHSMLAHLRSQTLDDFKDAFYKARNRNRGETTAVAAYDCM 180
           VR+ +R +LE K+L+L+QPA+ SML H+RS TL+ FK+AF KA   N GE  ++AA  C 
Sbjct: 255 VRSAKRKQLEEKLLQLVQPAHQSMLGHIRSGTLEKFKEAFDKA--LNAGEGFSLAAQTCT 312

Query: 181 IHFMSVFDEGCTDVDMKEANWDQARAERNL 270
             +M+ FDE C D  +++ANWD ++    L
Sbjct: 313 QSYMAQFDEWCADAVIEQANWDTSKVRDKL 342


Top