BLASTX nr result

ID: Coptis25_contig00024409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024409
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80094.1| hypothetical protein VITISV_010722 [Vitis vinifera]   143   2e-32
emb|CAN63228.1| hypothetical protein VITISV_002667 [Vitis vinifera]   143   2e-32
ref|XP_002510247.1| conserved hypothetical protein [Ricinus comm...   135   5e-30
ref|XP_004141250.1| PREDICTED: uncharacterized protein LOC101212...   128   6e-28
ref|XP_002327128.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25

>emb|CAN80094.1| hypothetical protein VITISV_010722 [Vitis vinifera]
          Length = 261

 Score =  143 bits (360), Expect = 2e-32
 Identities = 76/124 (61%), Positives = 93/124 (75%)
 Frame = -1

Query: 428 SSSNVPQWSVFDSVKTIPAKPETLMAEIEVNISSIEYAHATSFLEINSFSGETSTNSDEE 249
           S    P WSVFD VK IP+ PETLMAEI   I+++E A AT+ L+  S S   +T S   
Sbjct: 135 SGEENPPWSVFDRVKNIPSMPETLMAEINAAITALECARATTLLDSPSSSLPKNTRS-AA 193

Query: 248 SMRKHHDERLADEAYKAGCAALASGKLDEALCSLKVALSKCPPDKVSAIGKLKSLITLTS 69
           + + H+D R+ADEAYKAGCAALA+GKLDEAL SL +ALSKCPPDK SA+ KL+SLI+LTS
Sbjct: 194 NKKPHYDARMADEAYKAGCAALAAGKLDEALHSLNLALSKCPPDKTSAVAKLQSLISLTS 253

Query: 68  QQLE 57
           QQL+
Sbjct: 254 QQLK 257


>emb|CAN63228.1| hypothetical protein VITISV_002667 [Vitis vinifera]
          Length = 340

 Score =  143 bits (360), Expect = 2e-32
 Identities = 76/124 (61%), Positives = 93/124 (75%)
 Frame = -1

Query: 428 SSSNVPQWSVFDSVKTIPAKPETLMAEIEVNISSIEYAHATSFLEINSFSGETSTNSDEE 249
           S    P WSVFD VK IP+ PETLMAEI   I+++E A AT+ L+  S S   +T S   
Sbjct: 214 SGEENPPWSVFDRVKNIPSMPETLMAEINAAITALECARATTLLDSPSSSLPKNTRS-AA 272

Query: 248 SMRKHHDERLADEAYKAGCAALASGKLDEALCSLKVALSKCPPDKVSAIGKLKSLITLTS 69
           + + H+D R+ADEAYKAGCAALA+GKLDEAL SL +ALSKCPPDK SA+ KL+SLI+LTS
Sbjct: 273 NKKPHYDARMADEAYKAGCAALAAGKLDEALHSLNLALSKCPPDKTSAVAKLQSLISLTS 332

Query: 68  QQLE 57
           QQL+
Sbjct: 333 QQLK 336


>ref|XP_002510247.1| conserved hypothetical protein [Ricinus communis]
           gi|223550948|gb|EEF52434.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 131

 Score =  135 bits (339), Expect = 5e-30
 Identities = 70/118 (59%), Positives = 88/118 (74%), Gaps = 1/118 (0%)
 Frame = -1

Query: 407 WSVFDSVKTIPAKPETLMAEIEVNISSIEYAHATSFLEINSFSGETS-TNSDEESMRKHH 231
           WSVFD +K IP  PE LMAEI+  I+++EYA AT+ L+  S S   S T S   S    +
Sbjct: 10  WSVFDGIKKIPPTPEALMAEIDTAITNLEYARATALLDPQSQSPTHSRTKSLNGSSASRY 69

Query: 230 DERLADEAYKAGCAALASGKLDEALCSLKVALSKCPPDKVSAIGKLKSLITLTSQQLE 57
           D R+ADEAY+AGCAALA+GKLDEA  SL ++LSKCPPDK SA+ KL+SLI+LT+QQL+
Sbjct: 70  DARMADEAYRAGCAALAAGKLDEAFQSLNISLSKCPPDKTSAVAKLQSLISLTAQQLQ 127


>ref|XP_004141250.1| PREDICTED: uncharacterized protein LOC101212714 [Cucumis sativus]
           gi|449498701|ref|XP_004160610.1| PREDICTED:
           uncharacterized protein LOC101227206 [Cucumis sativus]
          Length = 152

 Score =  128 bits (321), Expect = 6e-28
 Identities = 66/124 (53%), Positives = 82/124 (66%)
 Frame = -1

Query: 428 SSSNVPQWSVFDSVKTIPAKPETLMAEIEVNISSIEYAHATSFLEINSFSGETSTNSDEE 249
           S   +  W+VFDSVKT    PE LM EI   IS++EYA  T++LE      E        
Sbjct: 17  SEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYLESPISPDEPEDEEPSA 76

Query: 248 SMRKHHDERLADEAYKAGCAALASGKLDEALCSLKVALSKCPPDKVSAIGKLKSLITLTS 69
           + R  +D R+AD AYKAGC AL  GKLDEAL SL V+LSKCPP+K SA+ K++SLI+LTS
Sbjct: 77  NSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPEKSSAVAKIQSLISLTS 136

Query: 68  QQLE 57
           QQL+
Sbjct: 137 QQLQ 140


>ref|XP_002327128.1| predicted protein [Populus trichocarpa] gi|222835443|gb|EEE73878.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score =  120 bits (301), Expect = 1e-25
 Identities = 66/124 (53%), Positives = 89/124 (71%), Gaps = 7/124 (5%)
 Frame = -1

Query: 407 WSVFDSVKTIPAK-PETLMAEIEVNISSIEYAHATSFLEINSFSGETSTNSDEESMRK-- 237
           WSVF+ V+++ +  PETLMAEI+  I  +EY+ AT+ L+  S    T TN+ + SM    
Sbjct: 10  WSVFEGVRSMASSTPETLMAEIDTAIGKLEYSRATALLDSPS---PTPTNTSKTSMSSDS 66

Query: 236 ----HHDERLADEAYKAGCAALASGKLDEALCSLKVALSKCPPDKVSAIGKLKSLITLTS 69
                +D ++AD AY+AGCA+LA+GKLDEAL  L V+LSKCPPDK SA+ KL+SLI+LTS
Sbjct: 67  GANPQYDVKMADGAYRAGCASLAAGKLDEALQYLNVSLSKCPPDKTSAVAKLQSLISLTS 126

Query: 68  QQLE 57
           QQL+
Sbjct: 127 QQLQ 130


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