BLASTX nr result

ID: Coptis25_contig00024408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024408
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523264.1| hypothetical protein RCOM_0649410 [Ricinus c...    75   4e-12
ref|XP_002300403.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
tpg|DAA45057.1| TPA: hypothetical protein ZEAMMB73_900156 [Zea m...    72   6e-11
ref|XP_002333950.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
dbj|BAK02732.1| predicted protein [Hordeum vulgare subsp. vulgare]     71   1e-10

>ref|XP_002523264.1| hypothetical protein RCOM_0649410 [Ricinus communis]
           gi|223537477|gb|EEF39103.1| hypothetical protein
           RCOM_0649410 [Ricinus communis]
          Length = 731

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/76 (51%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
 Frame = -3

Query: 220 KVHEKKKTELPDCLLMMLWEPKLSMEVSKETWVCSTDFIQRRPKQ----QIVHIDGGDES 53
           K  E ++  LPDCLL+M+ EPKLSMEVSKETWVCSTDFI+  P+     Q+   DGGD+ 
Sbjct: 567 KERENQQPLLPDCLLLMMCEPKLSMEVSKETWVCSTDFIRWLPEHSRPPQVKKRDGGDQP 626

Query: 52  SRSKDIKSSNPAQQLN 5
            +   I ++ P+ Q N
Sbjct: 627 KKRISIDNNPPSVQGN 642


>ref|XP_002300403.1| predicted protein [Populus trichocarpa] gi|222847661|gb|EEE85208.1|
           predicted protein [Populus trichocarpa]
          Length = 730

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/74 (52%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
 Frame = -3

Query: 220 KVHEKKKTELPDCLLMMLWEPKLSMEVSKETWVCSTDFIQRRPK--QQIVHIDGGDESSR 47
           K  +  +  LPDCLL+M+ EPKLSMEVSKETWVC+TDFI+  P+  + +   DG DE  +
Sbjct: 559 KKRDSSQPLLPDCLLLMMCEPKLSMEVSKETWVCTTDFIRWLPEHSRPVNKADGKDEPKK 618

Query: 46  SKDIKSSNPAQQLN 5
              I  SNPAQ  N
Sbjct: 619 RASI-DSNPAQVHN 631


>tpg|DAA45057.1| TPA: hypothetical protein ZEAMMB73_900156 [Zea mays]
          Length = 947

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/47 (68%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
 Frame = -3

Query: 223 PKVHEKKKT-ELPDCLLMMLWEPKLSMEVSKETWVCSTDFIQRRPKQ 86
           P +H +KK+ ELPDCLL+M++EPKLSMEVSKETWVCSTDF+  +  Q
Sbjct: 778 PVIHRRKKSGELPDCLLLMMYEPKLSMEVSKETWVCSTDFVHWKSYQ 824


>ref|XP_002333950.1| predicted protein [Populus trichocarpa] gi|222839181|gb|EEE77532.1|
           predicted protein [Populus trichocarpa]
          Length = 730

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/74 (52%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
 Frame = -3

Query: 220 KVHEKKKTELPDCLLMMLWEPKLSMEVSKETWVCSTDFIQRRPK--QQIVHIDGGDESSR 47
           K  +  +  LPDCLL+M+ EPKLSMEVSKETWVC+TDFI+  P+  + +   DG DE  +
Sbjct: 559 KERDSSQPLLPDCLLLMMREPKLSMEVSKETWVCTTDFIRWLPEHSRPVNKADGKDEPKK 618

Query: 46  SKDIKSSNPAQQLN 5
              I  SNPAQ  N
Sbjct: 619 RASI-DSNPAQVHN 631


>dbj|BAK02732.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 853

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/71 (52%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
 Frame = -3

Query: 208 KKKTELPDCLLMMLWEPKLSMEVSKETWVCSTDFIQ------RRPKQQIVHIDGGDESSR 47
           KK  ELPDCLLMM+ EPKLSMEVSKETWVCSTDF+       +  +QQ     G + ++ 
Sbjct: 680 KKSGELPDCLLMMMCEPKLSMEVSKETWVCSTDFVHWKSHQGQNRRQQTAAATGSNAAAS 739

Query: 46  SKDIKSSNPAQ 14
            +    SN AQ
Sbjct: 740 EETKDDSNNAQ 750


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