BLASTX nr result
ID: Coptis25_contig00024407
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024407 (206 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002316801.1| predicted protein [Populus trichocarpa] gi|2... 86 4e-15 ref|XP_002282849.2| PREDICTED: uncharacterized protein LOC100257... 80 2e-13 emb|CAN79799.1| hypothetical protein VITISV_010922 [Vitis vinifera] 80 2e-13 ref|XP_002300403.1| predicted protein [Populus trichocarpa] gi|2... 79 4e-13 ref|XP_002333950.1| predicted protein [Populus trichocarpa] gi|2... 79 4e-13 >ref|XP_002316801.1| predicted protein [Populus trichocarpa] gi|222859866|gb|EEE97413.1| predicted protein [Populus trichocarpa] Length = 773 Score = 85.5 bits (210), Expect = 4e-15 Identities = 41/64 (64%), Positives = 50/64 (78%), Gaps = 2/64 (3%) Frame = -2 Query: 202 CHPVPSMTTMIEQKLMNAVAYEPFVLTRCKSEPLRTSARLVPEACSWKNRQLGP--PSYE 29 C SM+TMIEQKL+ A AYEPFVLTRCKSEP+R++++L PEAC WKNR+L P P+ Sbjct: 704 CAGTESMSTMIEQKLVGAKAYEPFVLTRCKSEPMRSASKLAPEACFWKNRKLEPHRPAAT 763 Query: 28 AGVG 17 GVG Sbjct: 764 LGVG 767 >ref|XP_002282849.2| PREDICTED: uncharacterized protein LOC100257171 [Vitis vinifera] Length = 741 Score = 80.1 bits (196), Expect = 2e-13 Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 3/61 (4%) Frame = -2 Query: 187 SMTTMIEQKLMNAVAYEPFVLTRCKSEPLRTSARLVPEACSWKNRQLGPPSYE---AGVG 17 SM TMIEQK +NA AYEPFVLTRCKSEP+R+SA+L +AC WKN +L P AGVG Sbjct: 681 SMATMIEQKFVNAAAYEPFVLTRCKSEPMRSSAKLASDACFWKNPKLEPHRPRVGAAGVG 740 Query: 16 F 14 F Sbjct: 741 F 741 >emb|CAN79799.1| hypothetical protein VITISV_010922 [Vitis vinifera] Length = 134 Score = 80.1 bits (196), Expect = 2e-13 Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 3/61 (4%) Frame = -2 Query: 187 SMTTMIEQKLMNAVAYEPFVLTRCKSEPLRTSARLVPEACSWKNRQLGPPSYE---AGVG 17 SM TMIEQK +NA AYEPFVLTRCKSEP+R+SA+L +AC WKN +L P AGVG Sbjct: 74 SMATMIEQKFVNAAAYEPFVLTRCKSEPMRSSAKLASDACFWKNPKLEPHRPRVGAAGVG 133 Query: 16 F 14 F Sbjct: 134 F 134 >ref|XP_002300403.1| predicted protein [Populus trichocarpa] gi|222847661|gb|EEE85208.1| predicted protein [Populus trichocarpa] Length = 730 Score = 79.0 bits (193), Expect = 4e-13 Identities = 36/57 (63%), Positives = 46/57 (80%) Frame = -2 Query: 187 SMTTMIEQKLMNAVAYEPFVLTRCKSEPLRTSARLVPEACSWKNRQLGPPSYEAGVG 17 SM+TMIEQKL+ A AY+PFVLTRCKSEP+R++++L PEAC W NR+L P A +G Sbjct: 666 SMSTMIEQKLVGARAYDPFVLTRCKSEPMRSASKLAPEACFWMNRKLEPHGAAATLG 722 >ref|XP_002333950.1| predicted protein [Populus trichocarpa] gi|222839181|gb|EEE77532.1| predicted protein [Populus trichocarpa] Length = 730 Score = 79.0 bits (193), Expect = 4e-13 Identities = 36/57 (63%), Positives = 46/57 (80%) Frame = -2 Query: 187 SMTTMIEQKLMNAVAYEPFVLTRCKSEPLRTSARLVPEACSWKNRQLGPPSYEAGVG 17 SM+TMIEQKL+ A AY+PFVLTRCKSEP+R++++L PEAC W NR+L P A +G Sbjct: 666 SMSTMIEQKLVGARAYDPFVLTRCKSEPMRSASKLAPEACFWMNRKLEPHGAAATLG 722