BLASTX nr result

ID: Coptis25_contig00024407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024407
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316801.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002282849.2| PREDICTED: uncharacterized protein LOC100257...    80   2e-13
emb|CAN79799.1| hypothetical protein VITISV_010922 [Vitis vinifera]    80   2e-13
ref|XP_002300403.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_002333950.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13

>ref|XP_002316801.1| predicted protein [Populus trichocarpa] gi|222859866|gb|EEE97413.1|
           predicted protein [Populus trichocarpa]
          Length = 773

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/64 (64%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
 Frame = -2

Query: 202 CHPVPSMTTMIEQKLMNAVAYEPFVLTRCKSEPLRTSARLVPEACSWKNRQLGP--PSYE 29
           C    SM+TMIEQKL+ A AYEPFVLTRCKSEP+R++++L PEAC WKNR+L P  P+  
Sbjct: 704 CAGTESMSTMIEQKLVGAKAYEPFVLTRCKSEPMRSASKLAPEACFWKNRKLEPHRPAAT 763

Query: 28  AGVG 17
            GVG
Sbjct: 764 LGVG 767


>ref|XP_002282849.2| PREDICTED: uncharacterized protein LOC100257171 [Vitis vinifera]
          Length = 741

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
 Frame = -2

Query: 187 SMTTMIEQKLMNAVAYEPFVLTRCKSEPLRTSARLVPEACSWKNRQLGPPSYE---AGVG 17
           SM TMIEQK +NA AYEPFVLTRCKSEP+R+SA+L  +AC WKN +L P       AGVG
Sbjct: 681 SMATMIEQKFVNAAAYEPFVLTRCKSEPMRSSAKLASDACFWKNPKLEPHRPRVGAAGVG 740

Query: 16  F 14
           F
Sbjct: 741 F 741


>emb|CAN79799.1| hypothetical protein VITISV_010922 [Vitis vinifera]
          Length = 134

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
 Frame = -2

Query: 187 SMTTMIEQKLMNAVAYEPFVLTRCKSEPLRTSARLVPEACSWKNRQLGPPSYE---AGVG 17
           SM TMIEQK +NA AYEPFVLTRCKSEP+R+SA+L  +AC WKN +L P       AGVG
Sbjct: 74  SMATMIEQKFVNAAAYEPFVLTRCKSEPMRSSAKLASDACFWKNPKLEPHRPRVGAAGVG 133

Query: 16  F 14
           F
Sbjct: 134 F 134


>ref|XP_002300403.1| predicted protein [Populus trichocarpa] gi|222847661|gb|EEE85208.1|
           predicted protein [Populus trichocarpa]
          Length = 730

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 36/57 (63%), Positives = 46/57 (80%)
 Frame = -2

Query: 187 SMTTMIEQKLMNAVAYEPFVLTRCKSEPLRTSARLVPEACSWKNRQLGPPSYEAGVG 17
           SM+TMIEQKL+ A AY+PFVLTRCKSEP+R++++L PEAC W NR+L P    A +G
Sbjct: 666 SMSTMIEQKLVGARAYDPFVLTRCKSEPMRSASKLAPEACFWMNRKLEPHGAAATLG 722


>ref|XP_002333950.1| predicted protein [Populus trichocarpa] gi|222839181|gb|EEE77532.1|
           predicted protein [Populus trichocarpa]
          Length = 730

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 36/57 (63%), Positives = 46/57 (80%)
 Frame = -2

Query: 187 SMTTMIEQKLMNAVAYEPFVLTRCKSEPLRTSARLVPEACSWKNRQLGPPSYEAGVG 17
           SM+TMIEQKL+ A AY+PFVLTRCKSEP+R++++L PEAC W NR+L P    A +G
Sbjct: 666 SMSTMIEQKLVGARAYDPFVLTRCKSEPMRSASKLAPEACFWMNRKLEPHGAAATLG 722


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