BLASTX nr result
ID: Coptis25_contig00024400
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024400 (203 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAA50310.1| light-harvesting chlorophyll a/b-binding protein ... 140 1e-31 gb|ABW70800.1| chloroplast light harvesting chlorophyll a/b bind... 140 1e-31 ref|XP_002316737.1| light-harvesting complex II protein Lhcb1 [P... 140 1e-31 ref|XP_002306927.1| light-harvesting complex II protein Lhcb1 [P... 140 1e-31 ref|XP_002307725.1| light-harvesting complex II protein Lhcb1 [P... 140 1e-31 >gb|AAA50310.1| light-harvesting chlorophyll a/b-binding protein [Prunus persica] Length = 267 Score = 140 bits (353), Expect = 1e-31 Identities = 67/67 (100%), Positives = 67/67 (100%) Frame = +1 Query: 1 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEG 180 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEG Sbjct: 84 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEG 143 Query: 181 GLDYLGN 201 GLDYLGN Sbjct: 144 GLDYLGN 150 >gb|ABW70800.1| chloroplast light harvesting chlorophyll a/b binding protein [Populus euphratica] Length = 263 Score = 140 bits (353), Expect = 1e-31 Identities = 67/67 (100%), Positives = 67/67 (100%) Frame = +1 Query: 1 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEG 180 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEG Sbjct: 80 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEG 139 Query: 181 GLDYLGN 201 GLDYLGN Sbjct: 140 GLDYLGN 146 >ref|XP_002316737.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa] gi|222859802|gb|EEE97349.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa] Length = 264 Score = 140 bits (353), Expect = 1e-31 Identities = 67/67 (100%), Positives = 67/67 (100%) Frame = +1 Query: 1 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEG 180 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEG Sbjct: 81 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEG 140 Query: 181 GLDYLGN 201 GLDYLGN Sbjct: 141 GLDYLGN 147 >ref|XP_002306927.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa] gi|118487931|gb|ABK95787.1| unknown [Populus trichocarpa] gi|118489514|gb|ABK96559.1| unknown [Populus trichocarpa x Populus deltoides] gi|118489848|gb|ABK96723.1| unknown [Populus trichocarpa x Populus deltoides] gi|118489863|gb|ABK96730.1| unknown [Populus trichocarpa x Populus deltoides] gi|222856376|gb|EEE93923.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa] Length = 264 Score = 140 bits (353), Expect = 1e-31 Identities = 67/67 (100%), Positives = 67/67 (100%) Frame = +1 Query: 1 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEG 180 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEG Sbjct: 81 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEG 140 Query: 181 GLDYLGN 201 GLDYLGN Sbjct: 141 GLDYLGN 147 >ref|XP_002307725.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa] gi|118485884|gb|ABK94788.1| unknown [Populus trichocarpa] gi|222857174|gb|EEE94721.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa] Length = 264 Score = 140 bits (353), Expect = 1e-31 Identities = 67/67 (100%), Positives = 67/67 (100%) Frame = +1 Query: 1 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEG 180 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEG Sbjct: 81 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEG 140 Query: 181 GLDYLGN 201 GLDYLGN Sbjct: 141 GLDYLGN 147