BLASTX nr result

ID: Coptis25_contig00024395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024395
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83725.1| hypothetical protein VITISV_037053 [Vitis vinifera]    70   2e-10
emb|CAN59718.1| hypothetical protein VITISV_032347 [Vitis vinifera]    68   9e-10
emb|CAE01714.2| OSJNBb0050O03.4 [Oryza sativa Japonica Group]          67   1e-09
emb|CAN76142.1| hypothetical protein VITISV_007730 [Vitis vinifera]    67   2e-09
emb|CAN74340.1| hypothetical protein VITISV_017446 [Vitis vinifera]    67   2e-09

>emb|CAN83725.1| hypothetical protein VITISV_037053 [Vitis vinifera]
          Length = 1726

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/77 (45%), Positives = 47/77 (61%)
 Frame = -2

Query: 233  LPAIGLSGGILIAWDSDIMDVTDELHGAFSLSVECTMKINGFSWLLTSVYGPNSNTSRKH 54
            LPA G SGGI+I WDS     ++++ G FS++V+      GF W LTSVYGPN    RK 
Sbjct: 784  LPACGASGGIVILWDSXKFXCSEKVLGXFSVTVKLNSXEEGFFW-LTSVYGPNKAVXRKD 842

Query: 53   FMEELEDVRAWSTLPWC 3
            F  EL+D+   ++  WC
Sbjct: 843  FWMELQDLHGLTSPRWC 859


>emb|CAN59718.1| hypothetical protein VITISV_032347 [Vitis vinifera]
          Length = 1198

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/77 (45%), Positives = 46/77 (59%)
 Frame = -2

Query: 233 LPAIGLSGGILIAWDSDIMDVTDELHGAFSLSVECTMKINGFSWLLTSVYGPNSNTSRKH 54
           LPA G SGGI+I WDS     + ++ G+FS++V+      GF W LTSVYGPN    RK 
Sbjct: 697 LPACGASGGIVILWDSXKFXCSXKVLGSFSVTVKLNSDEEGFFW-LTSVYGPNKAVWRKD 755

Query: 53  FMEELEDVRAWSTLPWC 3
           F  EL+D+   +   WC
Sbjct: 756 FWMELQDLHGLTFPRWC 772


>emb|CAE01714.2| OSJNBb0050O03.4 [Oryza sativa Japonica Group]
          Length = 1199

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/79 (39%), Positives = 45/79 (56%)
 Frame = -2

Query: 242 YTHLPAIGLSGGILIAWDSDIMDVTDELHGAFSLSVECTMKINGFSWLLTSVYGPNSNTS 63
           Y+ LPA+G SGG+L+AW + +  V+D  H  FSL+       N   W L+ VYGP     
Sbjct: 407 YSFLPAVGRSGGVLLAWRTTVWSVSDVHHADFSLTALVRHSSNVAPWWLSIVYGPQEEPD 466

Query: 62  RKHFMEELEDVRAWSTLPW 6
           +  F++EL  +R+  T PW
Sbjct: 467 KLRFLDELRSLRSSCTGPW 485


>emb|CAN76142.1| hypothetical protein VITISV_007730 [Vitis vinifera]
          Length = 728

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/77 (42%), Positives = 43/77 (55%)
 Frame = -2

Query: 233 LPAIGLSGGILIAWDSDIMDVTDELHGAFSLSVECTMKINGFSWLLTSVYGPNSNTSRKH 54
           L A G +GGILI WD  ++D+ D   G F+LS    +  NG +W+ T VYGP +   R+ 
Sbjct: 20  LNAEGAAGGILICWDKRVLDILDWEEGHFTLSCRFKIMENGVTWVFTGVYGPFTKXEREG 79

Query: 53  FMEELEDVRAWSTLPWC 3
             EEL  VR     PWC
Sbjct: 80  MWEELGAVRGLWDDPWC 96


>emb|CAN74340.1| hypothetical protein VITISV_017446 [Vitis vinifera]
          Length = 1456

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/81 (41%), Positives = 49/81 (60%)
 Frame = -2

Query: 245 KYTHLPAIGLSGGILIAWDSDIMDVTDELHGAFSLSVECTMKINGFSWLLTSVYGPNSNT 66
           ++  LPA G SGGI+I WDS     ++++ G+FS++V+      GF W LTS+YGPN   
Sbjct: 685 EWAALPACGASGGIVILWDSIKFKCSEKVLGSFSVTVKLNSDEEGFFW-LTSMYGPNKPV 743

Query: 65  SRKHFMEELEDVRAWSTLPWC 3
            RK F  EL+D+   +   WC
Sbjct: 744 WRKDFWLELQDLHGLTFPRWC 764


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