BLASTX nr result

ID: Coptis25_contig00024379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024379
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282011.1| PREDICTED: CTL-like protein DDB_G0274487 [Vi...   301   5e-80
ref|XP_002529146.1| Protein PNS1, putative [Ricinus communis] gi...   290   1e-76
ref|XP_003535731.1| PREDICTED: CTL-like protein DDB_G0274487-lik...   286   1e-75
ref|XP_003555227.1| PREDICTED: CTL-like protein DDB_G0274487-lik...   280   9e-74
ref|XP_004135106.1| PREDICTED: CTL-like protein DDB_G0274487-lik...   279   2e-73

>ref|XP_002282011.1| PREDICTED: CTL-like protein DDB_G0274487 [Vitis vinifera]
           gi|297737849|emb|CBI27050.3| unnamed protein product
           [Vitis vinifera]
          Length = 504

 Score =  301 bits (771), Expect = 5e-80
 Identities = 149/188 (79%), Positives = 161/188 (85%), Gaps = 4/188 (2%)
 Frame = -3

Query: 561 IRGLRSKIGNNECLLCCVDFFFHLVETLVRFFNKYAYVQIAVYGKSFNHSARDAWELFQS 382
           IRG RSKIGNNECLLCCVDF FHLVETLVRFFNKYAYVQIAVYGKSFNHSARDAWELFQS
Sbjct: 317 IRGFRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKSFNHSARDAWELFQS 376

Query: 381 TGVEALVAYDCSGAVXXXXXXXXXXXXXTCSGLWTWFRDRDRVIMIGFTATLMGMILVGL 202
           TGVEAL+AYDCSGAV             TCSG+WTWFR+ DRVIM+G TA LMGMILVGL
Sbjct: 377 TGVEALIAYDCSGAVLLMGTVLGGLITGTCSGVWTWFRNSDRVIMVGSTAMLMGMILVGL 436

Query: 201 ALVVVESAVTSIYICYAEDPLLIHRWDAEFFSQMSEVLHQRLQHRSSRAREV----RFNG 34
           A+VVVESAVTSIYICYAEDPLLIHRWDAEFF+QMSE LHQRLQ+RS+R REV    + +G
Sbjct: 437 AMVVVESAVTSIYICYAEDPLLIHRWDAEFFNQMSETLHQRLQYRSARVREVLSQNQLDG 496

Query: 33  QLQESVSV 10
            +QES+ V
Sbjct: 497 HIQESIPV 504


>ref|XP_002529146.1| Protein PNS1, putative [Ricinus communis]
           gi|223531425|gb|EEF33259.1| Protein PNS1, putative
           [Ricinus communis]
          Length = 497

 Score =  290 bits (742), Expect = 1e-76
 Identities = 146/188 (77%), Positives = 159/188 (84%), Gaps = 4/188 (2%)
 Frame = -3

Query: 561 IRGLRSKIGNNECLLCCVDFFFHLVETLVRFFNKYAYVQIAVYGKSFNHSARDAWELFQS 382
           IRGLRSKIG NECLLCCVDF FHLVETLVRFFNKYAYVQIAVYGKSFNHSARDAWELFQS
Sbjct: 310 IRGLRSKIGKNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKSFNHSARDAWELFQS 369

Query: 381 TGVEALVAYDCSGAVXXXXXXXXXXXXXTCSGLWTWFRDRDRVIMIGFTATLMGMILVGL 202
           TGVEALVAYDCSGAV             TCSG+WT  +  DRVIM+G TA LMGM+LVG+
Sbjct: 370 TGVEALVAYDCSGAVLLMGTVLSGLITGTCSGVWTRIKWNDRVIMVGSTAMLMGMVLVGV 429

Query: 201 ALVVVESAVTSIYICYAEDPLLIHRWDAEFFSQMSEVLHQRLQHRSSRAREV----RFNG 34
           A+VVVESAVTSIYICYAEDPLLIHRWDAEFF+Q+SE LHQRLQHRS+RAREV    RF+ 
Sbjct: 430 AMVVVESAVTSIYICYAEDPLLIHRWDAEFFNQLSETLHQRLQHRSARAREVVSSNRFDI 489

Query: 33  QLQESVSV 10
            ++ES+ V
Sbjct: 490 HIRESIPV 497


>ref|XP_003535731.1| PREDICTED: CTL-like protein DDB_G0274487-like [Glycine max]
          Length = 440

 Score =  286 bits (733), Expect = 1e-75
 Identities = 142/182 (78%), Positives = 154/182 (84%)
 Frame = -3

Query: 561 IRGLRSKIGNNECLLCCVDFFFHLVETLVRFFNKYAYVQIAVYGKSFNHSARDAWELFQS 382
           IRG RSKIGNNECLLC VDF FHLVETLVRFFNKYAYVQIAVYGKSFNHSARDAWELFQS
Sbjct: 253 IRGFRSKIGNNECLLCLVDFLFHLVETLVRFFNKYAYVQIAVYGKSFNHSARDAWELFQS 312

Query: 381 TGVEALVAYDCSGAVXXXXXXXXXXXXXTCSGLWTWFRDRDRVIMIGFTATLMGMILVGL 202
           TGVEALVAYDCSGAV             TCSG+W W + +DRVIMIG+T  LMGM+LVGL
Sbjct: 313 TGVEALVAYDCSGAVLLMGTVFGGLITGTCSGVWAWVKWKDRVIMIGYTTMLMGMVLVGL 372

Query: 201 ALVVVESAVTSIYICYAEDPLLIHRWDAEFFSQMSEVLHQRLQHRSSRAREVRFNGQLQE 22
           A+VVVESAVTSIYICYAEDPLLI RWDAEFF+QMSE LHQRLQ+RS+RAREV  + +L +
Sbjct: 373 AMVVVESAVTSIYICYAEDPLLIQRWDAEFFNQMSETLHQRLQYRSARAREVLTHNRLDD 432

Query: 21  SV 16
            V
Sbjct: 433 IV 434


>ref|XP_003555227.1| PREDICTED: CTL-like protein DDB_G0274487-like [Glycine max]
          Length = 493

 Score =  280 bits (717), Expect = 9e-74
 Identities = 141/182 (77%), Positives = 151/182 (82%)
 Frame = -3

Query: 561 IRGLRSKIGNNECLLCCVDFFFHLVETLVRFFNKYAYVQIAVYGKSFNHSARDAWELFQS 382
           IRG RSKIGNNECLLC VDF FHLVETLVRFFNKYAYVQIAVYGKSFN SARDAWELFQS
Sbjct: 306 IRGFRSKIGNNECLLCLVDFLFHLVETLVRFFNKYAYVQIAVYGKSFNRSARDAWELFQS 365

Query: 381 TGVEALVAYDCSGAVXXXXXXXXXXXXXTCSGLWTWFRDRDRVIMIGFTATLMGMILVGL 202
           TGVEALVAYDCSGAV             TCSG+W W +  DRVIMIG T  LMGM+LVGL
Sbjct: 366 TGVEALVAYDCSGAVLLMGTVFGGLITGTCSGVWAWVKWSDRVIMIGSTTMLMGMVLVGL 425

Query: 201 ALVVVESAVTSIYICYAEDPLLIHRWDAEFFSQMSEVLHQRLQHRSSRAREVRFNGQLQE 22
           A+VVVESAVTSIYICYAEDPLLI RWDAEFF+QMSE LHQRLQ+RS+RAREV  + +L +
Sbjct: 426 AMVVVESAVTSIYICYAEDPLLIQRWDAEFFNQMSETLHQRLQYRSARAREVLTHNRLDD 485

Query: 21  SV 16
            V
Sbjct: 486 IV 487


>ref|XP_004135106.1| PREDICTED: CTL-like protein DDB_G0274487-like [Cucumis sativus]
           gi|449527986|ref|XP_004170988.1| PREDICTED: CTL-like
           protein DDB_G0274487-like [Cucumis sativus]
          Length = 502

 Score =  279 bits (714), Expect = 2e-73
 Identities = 138/186 (74%), Positives = 156/186 (83%), Gaps = 4/186 (2%)
 Frame = -3

Query: 561 IRGLRSKIGNNECLLCCVDFFFHLVETLVRFFNKYAYVQIAVYGKSFNHSARDAWELFQS 382
           IRG+RSKIG NECLLCCVDF FHLVETLVRFFNKYAYVQIAVYGKSFN SARDAWELFQS
Sbjct: 315 IRGIRSKIGKNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKSFNRSARDAWELFQS 374

Query: 381 TGVEALVAYDCSGAVXXXXXXXXXXXXXTCSGLWTWFRDRDRVIMIGFTATLMGMILVGL 202
           TGVE LVAYDCSGAV             TCSG+WTW + +D+V M+  TATLMGM+LVGL
Sbjct: 375 TGVETLVAYDCSGAVLLMSTVMGGLTAGTCSGIWTWIKWKDKVSMVACTATLMGMVLVGL 434

Query: 201 ALVVVESAVTSIYICYAEDPLLIHRWDAEFFSQMSEVLHQRLQHRSSRAREV----RFNG 34
           A+VVVESAVTSIYICYAE+PLLI +WDAEFF+Q+SE+LHQRLQHRS+RAREV    RF+ 
Sbjct: 435 AIVVVESAVTSIYICYAENPLLIQKWDAEFFNQISEMLHQRLQHRSARAREVLSDYRFDS 494

Query: 33  QLQESV 16
           + ++ V
Sbjct: 495 RREDLV 500


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