BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024376
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    56   3e-06

>ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cucumis sativus]
          Length = 757

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 11/70 (15%)
 Frame = +2

Query: 197 PMLEHLCERGRPRRLRECLS-----------SIRTVIPGHCKRRTFEADYNPFVLMLRRD 343
           P+ ++LCE G+ ++  +              S +T+I GHCK  TFE+ Y   VLMLR+D
Sbjct: 445 PIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKD 504

Query: 344 SVPDVEIYES 373
            +PD E YES
Sbjct: 505 FLPDFETYES 514


>ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 11/70 (15%)
 Frame = +2

Query: 197 PMLEHLCERGRPRRLRECLS-----------SIRTVIPGHCKRRTFEADYNPFVLMLRRD 343
           P+ ++LCE G+ ++  +              S +T+I GHCK  TFE+ Y   VLMLR+D
Sbjct: 445 PIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKD 504

Query: 344 SVPDVEIYES 373
             PD E YES
Sbjct: 505 FXPDFETYES 514