BLASTX nr result

ID: Coptis25_contig00024360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024360
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28311.3| unnamed protein product [Vitis vinifera]              119   4e-25
ref|XP_002275103.1| PREDICTED: uncharacterized protein At2g27730...   119   4e-25
gb|AFK47834.1| unknown [Medicago truncatula]                          115   4e-24
ref|XP_002523820.1| conserved hypothetical protein [Ricinus comm...   108   9e-22
ref|NP_001236566.1| uncharacterized protein LOC100500340 [Glycin...   105   6e-21

>emb|CBI28311.3| unnamed protein product [Vitis vinifera]
          Length = 170

 Score =  119 bits (298), Expect = 4e-25
 Identities = 65/111 (58%), Positives = 75/111 (67%)
 Frame = -3

Query: 593 ATRNAARHVSRRLMSSGGKVLGEEEKAAENVYXXXXXXXXXXXLARKGPKPEDQPTTSTS 414
           ATR AAR+VSRRL SS GKVLGEEEKAAEN+Y           LARKGPKPE++P TS+ 
Sbjct: 51  ATRIAARYVSRRL-SSSGKVLGEEEKAAENIYIKKAEQEKLEKLARKGPKPEEKPVTSSG 109

Query: 413 GSVADAKPXXXXXXXXXXXTDKYRNYGVLAGVVTALGALGWYLKATAKKPE 261
            +V DA P           TDK+RNY VLAG    LG LGWYLK+++KKPE
Sbjct: 110 ETVTDANPSGPASSTAGVSTDKHRNYAVLAGTAAILGGLGWYLKSSSKKPE 160


>ref|XP_002275103.1| PREDICTED: uncharacterized protein At2g27730, mitochondrial isoform
           3 [Vitis vinifera] gi|225464932|ref|XP_002275077.1|
           PREDICTED: uncharacterized protein At2g27730,
           mitochondrial isoform 2 [Vitis vinifera]
           gi|225464934|ref|XP_002275041.1| PREDICTED:
           uncharacterized protein At2g27730, mitochondrial isoform
           1 [Vitis vinifera] gi|147785806|emb|CAN62125.1|
           hypothetical protein VITISV_037578 [Vitis vinifera]
          Length = 114

 Score =  119 bits (298), Expect = 4e-25
 Identities = 65/111 (58%), Positives = 75/111 (67%)
 Frame = -3

Query: 593 ATRNAARHVSRRLMSSGGKVLGEEEKAAENVYXXXXXXXXXXXLARKGPKPEDQPTTSTS 414
           ATR AAR+VSRRL SS GKVLGEEEKAAEN+Y           LARKGPKPE++P TS+ 
Sbjct: 2   ATRIAARYVSRRL-SSSGKVLGEEEKAAENIYIKKAEQEKLEKLARKGPKPEEKPVTSSG 60

Query: 413 GSVADAKPXXXXXXXXXXXTDKYRNYGVLAGVVTALGALGWYLKATAKKPE 261
            +V DA P           TDK+RNY VLAG    LG LGWYLK+++KKPE
Sbjct: 61  ETVTDANPSGPASSTAGVSTDKHRNYAVLAGTAAILGGLGWYLKSSSKKPE 111


>gb|AFK47834.1| unknown [Medicago truncatula]
          Length = 120

 Score =  115 bits (289), Expect = 4e-24
 Identities = 66/115 (57%), Positives = 71/115 (61%), Gaps = 4/115 (3%)
 Frame = -3

Query: 593 ATRNAARHVSRRLMSSG-GKVLGEEEKAAENVYXXXXXXXXXXXLARKGPKPEDQPTTST 417
           ATR AAR  SRRL SSG GKVLGEEEKA EN Y           LARKGP+PE  P   +
Sbjct: 2   ATRVAARFASRRLFSSGSGKVLGEEEKAVENAYFKKAEQEKLEKLARKGPQPEATPAAGS 61

Query: 416 SGSVADAKP---XXXXXXXXXXXTDKYRNYGVLAGVVTALGALGWYLKATAKKPE 261
            GSV DAKP              +DKYRNYGV+AG +T   ALGWYLK TAKKPE
Sbjct: 62  GGSVTDAKPSASGHSDTSGPKVSSDKYRNYGVVAGTITIFAALGWYLKGTAKKPE 116


>ref|XP_002523820.1| conserved hypothetical protein [Ricinus communis]
           gi|223536908|gb|EEF38546.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 112

 Score =  108 bits (269), Expect = 9e-22
 Identities = 62/115 (53%), Positives = 70/115 (60%)
 Frame = -3

Query: 593 ATRNAARHVSRRLMSSGGKVLGEEEKAAENVYXXXXXXXXXXXLARKGPKPEDQPTTSTS 414
           ATR A R VSRR  SSGGK+L EEEKAAEN+Y           LARKGPKPE++   +TS
Sbjct: 2   ATRMAVRFVSRRF-SSGGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEK---ATS 57

Query: 413 GSVADAKPXXXXXXXXXXXTDKYRNYGVLAGVVTALGALGWYLKATAKKPEPVTE 249
           G   D KP           TDKYRNY V+AG VT  GALGWYL +  KK E V +
Sbjct: 58  GPATDVKPSASASSTSGASTDKYRNYAVVAGTVTVFGALGWYLNSRGKKTEEVQD 112


>ref|NP_001236566.1| uncharacterized protein LOC100500340 [Glycine max]
           gi|255630077|gb|ACU15392.1| unknown [Glycine max]
          Length = 115

 Score =  105 bits (262), Expect = 6e-21
 Identities = 64/115 (55%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
 Frame = -3

Query: 593 ATRNAARHVSRRLMSSG-GKVLGEEEKAAENVYXXXXXXXXXXXLARKGPKPEDQPTTST 417
           A R AAR+ SRRL SSG GK+L EEEKAAEN Y           LARKGP+PE      +
Sbjct: 2   AARVAARYGSRRLFSSGSGKILSEEEKAAENAYFKKAEQEKLEKLARKGPQPE----AGS 57

Query: 416 SGSVADAKPXXXXXXXXXXXT---DKYRNYGVLAGVVTALGALGWYLKATAKKPE 261
            GSV DAKP               DKYRNY V+AG VT LGALGWYLK  AKKPE
Sbjct: 58  GGSVTDAKPSSSGHAGTTADRVSTDKYRNYAVVAGTVTILGALGWYLKGAAKKPE 112


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