BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024358
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o...   207   7e-52
gb|ABD63192.1| Reverse transcriptase family protein [Asparagus o...   207   7e-52
gb|ABD63162.1| RNase H family protein [Asparagus officinalis]         207   9e-52
ref|XP_003633313.1| PREDICTED: uncharacterized protein LOC100854...   205   3e-51
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             204   6e-51

>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score =  207 bits (528), Expect = 7e-52
 Identities = 94/180 (52%), Positives = 124/180 (68%)
 Frame = +3

Query: 12   DVFAWTVEDVTGLDPEFACHRLHMKEDAKPVRQRMRSIRPKYAEGIREEVTQLKGAGIIR 191
            DVFAW  ED+ GLDP+ A HRL++  D KPV+Q+ R  RP+  E I  EV +L  +G +R
Sbjct: 653  DVFAWNYEDMPGLDPKVAMHRLNIDPDVKPVKQQQRRFRPEIMESIESEVKKLIDSGFVR 712

Query: 192  ETEFTEWLSNVVAVPKKNGKVRMCVDFTDVNRECPKDSYPMPRVDELVDRTAGYKIFSFM 371
            E +  +W++N+V VPKKNGKVR+C+DF D+N  CPKD +P+P  D ++D T GY+  SFM
Sbjct: 713  EEQHPDWVANIVPVPKKNGKVRICIDFRDLNATCPKDEFPLPITDVMIDNTCGYERMSFM 772

Query: 372  DASMGYNQVAMYGPDQEKTAFVVEGGTYCYTRMPFGLKNAGATFQRLGEKMFKSKIRKGI 551
            D   GYNQ+ M+  D++ TAF    G YCYT MPFGLKNAGAT+QR    +F   +RK I
Sbjct: 773  DGFSGYNQIKMHPDDEKHTAFRTPLGVYCYTVMPFGLKNAGATYQRAMNTIFHEHLRKKI 832


>gb|ABD63192.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1146

 Score =  207 bits (528), Expect = 7e-52
 Identities = 93/180 (51%), Positives = 126/180 (70%)
 Frame = +3

Query: 12   DVFAWTVEDVTGLDPEFACHRLHMKEDAKPVRQRMRSIRPKYAEGIREEVTQLKGAGIIR 191
            DVFAW  ED+ GLDP  A HRL +K DAKPV+Q+ R  RP+  E I  EV +L  +G IR
Sbjct: 484  DVFAWNYEDMPGLDPNVAMHRLDIKSDAKPVKQQQRRFRPQIMEAIEAEVKKLIESGFIR 543

Query: 192  ETEFTEWLSNVVAVPKKNGKVRMCVDFTDVNRECPKDSYPMPRVDELVDRTAGYKIFSFM 371
            E +  +WL+N++ V KKNGK+R+C+DF D+N  CPKD +P+P  D ++D T G++  SFM
Sbjct: 544  EEQHPDWLANIIPVMKKNGKIRICIDFRDLNTACPKDDFPLPITDVIIDNTCGFERMSFM 603

Query: 372  DASMGYNQVAMYGPDQEKTAFVVEGGTYCYTRMPFGLKNAGATFQRLGEKMFKSKIRKGI 551
            D   GYNQ+ M+  D++ TAF +  G +CYT MPFGLKNAGAT+QR   K+F+  +RK +
Sbjct: 604  DGFSGYNQIKMHPDDEKHTAFRIPLGVFCYTVMPFGLKNAGATYQRAMTKIFQEHLRKTV 663


>gb|ABD63162.1| RNase H family protein [Asparagus officinalis]
          Length = 1189

 Score =  207 bits (527), Expect = 9e-52
 Identities = 94/180 (52%), Positives = 124/180 (68%)
 Frame = +3

Query: 12  DVFAWTVEDVTGLDPEFACHRLHMKEDAKPVRQRMRSIRPKYAEGIREEVTQLKGAGIIR 191
           DVFAW  ED+ GLDP+ A H L++  DAKPV+Q+ R  RP+  E I  EV +L  +G +R
Sbjct: 149 DVFAWNYEDMPGLDPKVAMHHLNIDPDAKPVKQQQRRFRPEIMESIESEVKKLIDSGFVR 208

Query: 192 ETEFTEWLSNVVAVPKKNGKVRMCVDFTDVNRECPKDSYPMPRVDELVDRTAGYKIFSFM 371
           E +  +W++N+V VPKKNGKVR+C+DF D+N  CPKD +P+P  D ++D T GY+  SFM
Sbjct: 209 EEQHPDWVANIVPVPKKNGKVRICIDFRDLNAACPKDEFPLPITDVMIDNTCGYERMSFM 268

Query: 372 DASMGYNQVAMYGPDQEKTAFVVEGGTYCYTRMPFGLKNAGATFQRLGEKMFKSKIRKGI 551
           D   GYNQ+ M+  D++ TAF    G YCYT MPFGLKNAGAT+QR    +F   +RK I
Sbjct: 269 DGFSGYNQIKMHPDDEKHTAFRTPLGVYCYTVMPFGLKNAGATYQRAMNTIFHEHLRKKI 328


>ref|XP_003633313.1| PREDICTED: uncharacterized protein LOC100854367 [Vitis vinifera]
          Length = 955

 Score =  205 bits (522), Expect = 3e-51
 Identities = 92/179 (51%), Positives = 130/179 (72%)
 Frame = +3

Query: 3    ENRDVFAWTVEDVTGLDPEFACHRLHMKEDAKPVRQRMRSIRPKYAEGIREEVTQLKGAG 182
            +NRD+FAWT  D+TG+ P  A HRL++   +KPV+Q+++   P   + I++E+ +   AG
Sbjct: 557  QNRDIFAWTHFDMTGIHPTIASHRLNILASSKPVQQKVQRFHPDKQKVIQDEMEKFLEAG 616

Query: 183  IIRETEFTEWLSNVVAVPKKNGKVRMCVDFTDVNRECPKDSYPMPRVDELVDRTAGYKIF 362
             IRE E+ EWL+N V VPKK GK R+CVD+T++N  C KDS+P+PR+D++VD TAG+++ 
Sbjct: 617  FIREVEYPEWLANAVVVPKKGGKWRVCVDYTNLNNACSKDSFPLPRIDQIVDATAGHEVL 676

Query: 363  SFMDASMGYNQVAMYGPDQEKTAFVVEGGTYCYTRMPFGLKNAGATFQRLGEKMFKSKI 539
            SF+DA  GY+Q+ M   D+EKT F+   G YCY  MPFGLKNAGAT+Q+L  K+FK  I
Sbjct: 677  SFLDAFSGYHQIPMAPEDEEKTTFITPHGLYCYKVMPFGLKNAGATYQKLMTKIFKPLI 735


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  204 bits (520), Expect = 6e-51
 Identities = 94/182 (51%), Positives = 126/182 (69%)
 Frame = +3

Query: 6    NRDVFAWTVEDVTGLDPEFACHRLHMKEDAKPVRQRMRSIRPKYAEGIREEVTQLKGAGI 185
            N   FAW++ED+ G+DP    H L++    KPV+Q+ R + P+ A  + EEV +L  AG 
Sbjct: 793  NSKTFAWSIEDMKGIDPAITAHELNVDPTFKPVKQKRRKLGPERARAVNEEVEKLLKAGQ 852

Query: 186  IRETEFTEWLSNVVAVPKKNGKVRMCVDFTDVNRECPKDSYPMPRVDELVDRTAGYKIFS 365
            I E ++ EWL+N V V KKNGK R+CVD+TD+N+ CPKDSYP+P +D LV+ T+G  + S
Sbjct: 853  IIEVKYPEWLANPVVVKKKNGKWRVCVDYTDLNKACPKDSYPLPHIDRLVEATSGNGLLS 912

Query: 366  FMDASMGYNQVAMYGPDQEKTAFVVEGGTYCYTRMPFGLKNAGATFQRLGEKMFKSKIRK 545
            FMDA  GYNQ+ M+  DQEKT+FV + GTYCY  M FGLKNAGAT+QR   KM   +I +
Sbjct: 913  FMDAFSGYNQILMHKDDQEKTSFVTDRGTYCYKVMSFGLKNAGATYQRFVNKMLADQIGR 972

Query: 546  GI 551
             +
Sbjct: 973  TV 974