BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024350
         (1244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interactin...   571   e-160
ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interactin...   555   e-156
ref|XP_004141617.1| PREDICTED: U3 small nucleolar RNA-interactin...   525   e-146
ref|XP_003535072.1| PREDICTED: U3 small nucleolar RNA-interactin...   518   e-145
ref|XP_002306239.1| predicted protein [Populus trichocarpa] gi|2...   512   e-143

>ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 1
            [Vitis vinifera] gi|297740813|emb|CBI30995.3| unnamed
            protein product [Vitis vinifera]
          Length = 519

 Score =  571 bits (1472), Expect = e-160
 Identities = 273/372 (73%), Positives = 319/372 (85%), Gaps = 1/372 (0%)
 Frame = +1

Query: 1    RVQKPEIGDGFRLLVRHRQSVTAVALAEDDMKGFSASKDGTIIQWNVEKGKSEKYIWPTK 180
            RVQKPE  D FR+LV+HRQSVTAVAL+EDD+KGFSASKDGTI+QW+V+ GK EKY+WPT+
Sbjct: 147  RVQKPETVDEFRVLVKHRQSVTAVALSEDDLKGFSASKDGTIVQWDVDSGKGEKYMWPTE 206

Query: 181  EVLSSHGAKNPQNPSTKWSKHILALAASSDGRYLATGGLDRHVHLWDTRTRQHIQAFPGH 360
            EVL SHGAK+PQ  + K SKH+LALA SSDGRYLA+GG DRHVHLWDTRTR+H++AFPGH
Sbjct: 207  EVLKSHGAKDPQGRAMKHSKHVLALAVSSDGRYLASGGFDRHVHLWDTRTREHLRAFPGH 266

Query: 361  RGPVSCLTFRQGTSELISGSFDRTIKLWNAEDRAYMDTLFGHQGEVLTIDCLRKERLLTV 540
            RGPVSCLTFRQGTSEL SGSFDRTIK+W+AEDRAY+ +LFGHQ EVL+IDCLRKER+LTV
Sbjct: 267  RGPVSCLTFRQGTSELFSGSFDRTIKIWSAEDRAYITSLFGHQSEVLSIDCLRKERVLTV 326

Query: 541  GRDRTMRLWKVPEESQLVFRAPATSLECCSFISNDEFLSGSDDGSLELWNTLRKKPAYII 720
            GRDR+M+LWKVPEES+LVFRAPA+SLECC FI+NDEFLSGSDDGS+ELW  LRKKP YI+
Sbjct: 327  GRDRSMQLWKVPEESRLVFRAPASSLECCCFINNDEFLSGSDDGSIELWGMLRKKPVYIV 386

Query: 721  KNAHAAFALDDNCEAKDDAPSNGDYTENGSKKAISY-CTSALSWVGAVTVCRSSDLAASG 897
            KNAHA  A     E  D       Y ENG+     Y C++A SWV +VTVCRSSDLAASG
Sbjct: 387  KNAHALSATLRQPEQSDVGKIPNGYIENGNHNHEDYNCSTAYSWVSSVTVCRSSDLAASG 446

Query: 898  AGNGVVRLWTVDSDNKRVQPLYDLPLAGFVNSLAFAKSGRFLVAGVGQEPRLGRWGRIPA 1077
            A NG VRLW + S+ K ++PL++LPL GFVNSLAF+KSG+FLVAGVGQEPRLGRWGR+PA
Sbjct: 447  AANGSVRLWAIGSETKDIRPLFNLPLVGFVNSLAFSKSGQFLVAGVGQEPRLGRWGRLPA 506

Query: 1078 SKNGVLLQSLSI 1113
            ++NGV +QSL +
Sbjct: 507  ARNGVAVQSLKL 518


>ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 2
            [Vitis vinifera]
          Length = 500

 Score =  555 bits (1431), Expect = e-156
 Identities = 267/371 (71%), Positives = 313/371 (84%)
 Frame = +1

Query: 1    RVQKPEIGDGFRLLVRHRQSVTAVALAEDDMKGFSASKDGTIIQWNVEKGKSEKYIWPTK 180
            RVQKPE  D FR+LV+HRQSVTAVAL+EDD+KGFSASKDGTI+QW+V+ GK EKY+WPT+
Sbjct: 147  RVQKPETVDEFRVLVKHRQSVTAVALSEDDLKGFSASKDGTIVQWDVDSGKGEKYMWPTE 206

Query: 181  EVLSSHGAKNPQNPSTKWSKHILALAASSDGRYLATGGLDRHVHLWDTRTRQHIQAFPGH 360
            EVL SHGAK+PQ  + K SKH+LALA SSDGRYLA+GG DRHVHLWDTRTR+H++AFPGH
Sbjct: 207  EVLKSHGAKDPQGRAMKHSKHVLALAVSSDGRYLASGGFDRHVHLWDTRTREHLRAFPGH 266

Query: 361  RGPVSCLTFRQGTSELISGSFDRTIKLWNAEDRAYMDTLFGHQGEVLTIDCLRKERLLTV 540
            RGPVSCLTFRQGTSEL SGSFDRTIK+W+AEDRAY+ +LFGHQ EVL+IDCLRKER+LTV
Sbjct: 267  RGPVSCLTFRQGTSELFSGSFDRTIKIWSAEDRAYITSLFGHQSEVLSIDCLRKERVLTV 326

Query: 541  GRDRTMRLWKVPEESQLVFRAPATSLECCSFISNDEFLSGSDDGSLELWNTLRKKPAYII 720
            GRDR+M+LWKVPEES+LVFRAPA+SLECC FI+NDEFLSGSDDGS+ELW  LRKKP YI+
Sbjct: 327  GRDRSMQLWKVPEESRLVFRAPASSLECCCFINNDEFLSGSDDGSIELWGMLRKKPVYIV 386

Query: 721  KNAHAAFALDDNCEAKDDAPSNGDYTENGSKKAISYCTSALSWVGAVTVCRSSDLAASGA 900
            KNAHA  A     E   +                  C++A SWV +VTVCRSSDLAASGA
Sbjct: 387  KNAHALSATLRQPEQNYN------------------CSTAYSWVSSVTVCRSSDLAASGA 428

Query: 901  GNGVVRLWTVDSDNKRVQPLYDLPLAGFVNSLAFAKSGRFLVAGVGQEPRLGRWGRIPAS 1080
             NG VRLW + S+ K ++PL++LPL GFVNSLAF+KSG+FLVAGVGQEPRLGRWGR+PA+
Sbjct: 429  ANGSVRLWAIGSETKDIRPLFNLPLVGFVNSLAFSKSGQFLVAGVGQEPRLGRWGRLPAA 488

Query: 1081 KNGVLLQSLSI 1113
            +NGV +QSL +
Sbjct: 489  RNGVAVQSLKL 499


>ref|XP_004141617.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2-like [Cucumis
            sativus]
          Length = 494

 Score =  525 bits (1351), Expect = e-146
 Identities = 254/372 (68%), Positives = 303/372 (81%), Gaps = 1/372 (0%)
 Frame = +1

Query: 1    RVQKPEIGDGFRLLVRHRQSVTAVALAEDDMKGFSASKDGTIIQWNVEKGKSEKYIWPTK 180
            RVQKP   D F+LL++HRQSVTAVAL+EDD+KGFS+SKDGTI+ W+VE GK EKY WP+ 
Sbjct: 133  RVQKPVARDEFQLLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVESGKGEKYRWPSD 192

Query: 181  EVLSSHGAKNPQNPSTKWSKHILALAASSDGRYLATGGLDRHVHLWDTRTRQHIQAFPGH 360
            EVL  HGAK+PQ  +TK SK   +LA SSDGRYLA+GGLDRHVH+WDTRTR+HIQAFPGH
Sbjct: 193  EVLRLHGAKDPQGRATKHSKVTFSLAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGH 252

Query: 361  RGPVSCLTFRQGTSELISGSFDRTIKLWNAEDRAYMDTLFGHQGEVLTIDCLRKERLLTV 540
            RGPVSCLTFRQGTSEL SGS+DRT+K+WN +DRAY++TLFGHQ +VLTIDCLRKERLLTV
Sbjct: 253  RGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSDVLTIDCLRKERLLTV 312

Query: 541  GRDRTMRLWKVPEESQLVFRAPATSLECCSFISNDEFLSGSDDGSLELWNTLRKKPAYII 720
            GRDR+M+LWKVPEES+LVFRAPA+SLECC FISNDEFLSGSDDGS+ELW  L+KKP +I+
Sbjct: 313  GRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWTALKKKPVFIV 372

Query: 721  KNAHAAFALDDNCEAKDD-APSNGDYTENGSKKAISYCTSALSWVGAVTVCRSSDLAASG 897
            +NAH++ +   N E K++ A  NG      +    S+  SA SW+ +V+VCR+SDLAASG
Sbjct: 373  RNAHSSSSSSTNLELKENGAIPNGCMGNGDANHNTSHNLSAYSWISSVSVCRNSDLAASG 432

Query: 898  AGNGVVRLWTVDSDNKRVQPLYDLPLAGFVNSLAFAKSGRFLVAGVGQEPRLGRWGRIPA 1077
            AGNG VRLW + SD K V+PLYDLPL            GRF+VAGVGQEPRLGRWGRIPA
Sbjct: 433  AGNGSVRLWALTSDKKDVRPLYDLPL-----------FGRFVVAGVGQEPRLGRWGRIPA 481

Query: 1078 SKNGVLLQSLSI 1113
            ++NGV +  L +
Sbjct: 482  ARNGVAVHPLKL 493


>ref|XP_003535072.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2-like isoform
            1 [Glycine max]
          Length = 496

 Score =  518 bits (1335), Expect = e-145
 Identities = 248/364 (68%), Positives = 294/364 (80%), Gaps = 1/364 (0%)
 Frame = +1

Query: 25   DGFRLLVRHRQSVTAVALAEDDMKGFSASKDGTIIQWNVEKGKSEKYIWPTKEVLSSHGA 204
            +GFR+L +HR SVTAVAL+EDD KGFSASKDGTI+QW+V  G+ E+Y WP+  VL SHG 
Sbjct: 133  EGFRVLAKHRHSVTAVALSEDDSKGFSASKDGTIMQWDVNSGQCERYKWPSDSVLKSHGL 192

Query: 205  KNPQNPSTKWSKHILALAASSDGRYLATGGLDRHVHLWDTRTRQHIQAFPGHRGPVSCLT 384
            K+PQ  +T+ SK +LALAASSDGRYLATGGLDRH+H+WDTRTR+H+Q+FPGHRGPVSCLT
Sbjct: 193  KDPQGSATRQSKQVLALAASSDGRYLATGGLDRHIHIWDTRTREHLQSFPGHRGPVSCLT 252

Query: 385  FRQGTSELISGSFDRTIKLWNAEDRAYMDTLFGHQGEVLTIDCLRKERLLTVGRDRTMRL 564
            FRQGTSEL SGSFDRTIK+WN EDR YM TLFGHQ EVL+IDCLRKER+LT GRDR+M+L
Sbjct: 253  FRQGTSELFSGSFDRTIKIWNVEDRTYMSTLFGHQSEVLSIDCLRKERVLTAGRDRSMQL 312

Query: 565  WKVPEESQLVFRAPATSLECCSFISNDEFLSGSDDGSLELWNTLRKKPAYIIKNAHAAFA 744
            +KV EES+LVFRAPA+SLECC F+ NDE  SGSDDGS+ELW  +RKKP YI++NAHA   
Sbjct: 313  FKVHEESRLVFRAPASSLECCCFVGNDELFSGSDDGSIELWTVMRKKPIYILRNAHALPV 372

Query: 745  LDDNCEAKDDAPSNGDYTENG-SKKAISYCTSALSWVGAVTVCRSSDLAASGAGNGVVRL 921
                 + KD         ENG +     +C S  SWV AV+VCR+SDLAASGAGNG VRL
Sbjct: 373  DSMKSDQKDSEKLPNGNLENGYNHPKDHHCLSVFSWVSAVSVCRNSDLAASGAGNGSVRL 432

Query: 922  WTVDSDNKRVQPLYDLPLAGFVNSLAFAKSGRFLVAGVGQEPRLGRWGRIPASKNGVLLQ 1101
            W ++SD K ++ L ++PLAGFVNSLAFAKSG FLVAGVGQEPRLGRWGR P ++NGV + 
Sbjct: 433  WEIESDTKDIKSLCNVPLAGFVNSLAFAKSGEFLVAGVGQEPRLGRWGRNPEARNGVSIL 492

Query: 1102 SLSI 1113
             L +
Sbjct: 493  PLKL 496


>ref|XP_002306239.1| predicted protein [Populus trichocarpa] gi|222855688|gb|EEE93235.1|
            predicted protein [Populus trichocarpa]
          Length = 502

 Score =  512 bits (1319), Expect = e-143
 Identities = 244/372 (65%), Positives = 300/372 (80%)
 Frame = +1

Query: 1    RVQKPEIGDGFRLLVRHRQSVTAVALAEDDMKGFSASKDGTIIQWNVEKGKSEKYIWPTK 180
            RVQKPE  DGF +LV+HRQSVTAV L++DD KGFSASKDGTI+ W+V+ GK+EKY WP  
Sbjct: 144  RVQKPESVDGFEVLVKHRQSVTAVCLSDDDSKGFSASKDGTILHWDVDSGKAEKYQWPND 203

Query: 181  EVLSSHGAKNPQNPSTKWSKHILALAASSDGRYLATGGLDRHVHLWDTRTRQHIQAFPGH 360
            E+L SHGAKNP+  +TK S+++LALA S+DGRYLA+GGLDRHVHLWDTRTR+HIQAFPGH
Sbjct: 204  EILRSHGAKNPEGRATKHSRNVLALAVSTDGRYLASGGLDRHVHLWDTRTREHIQAFPGH 263

Query: 361  RGPVSCLTFRQGTSELISGSFDRTIKLWNAEDRAYMDTLFGHQGEVLTIDCLRKERLLTV 540
            +GPVSCLTFR+G+SEL SGS+DR+IK+WN EDRAYM+TLFGHQ E+LTIDCL +ER+L V
Sbjct: 264  KGPVSCLTFRKGSSELFSGSYDRSIKIWNVEDRAYMNTLFGHQSELLTIDCLWQERVLAV 323

Query: 541  GRDRTMRLWKVPEESQLVFRAPATSLECCSFISNDEFLSGSDDGSLELWNTLRKKPAYII 720
            GRDR+M+L+KV +ES+L+FR+  +SLECC FI N EF+SGSDDG++ELW+  +KKP YI+
Sbjct: 324  GRDRSMQLFKVHDESRLIFRSSTSSLECCCFIDNSEFVSGSDDGNIELWSVQKKKPVYIV 383

Query: 721  KNAHAAFALDDNCEAKDDAPSNGDYTENGSKKAISYCTSALSWVGAVTVCRSSDLAASGA 900
            KNAH +    +N E KD+  +   +              A SWV +V VCR SDLAASGA
Sbjct: 384  KNAHTSSTDVNNGELKDNGRNYNGHV-------------ASSWVSSVGVCRGSDLAASGA 430

Query: 901  GNGVVRLWTVDSDNKRVQPLYDLPLAGFVNSLAFAKSGRFLVAGVGQEPRLGRWGRIPAS 1080
            GNG VRLW V+   K ++PLYDLPL GFVNSLAFAKSG+FL+AGVGQEPRLGRWG   A+
Sbjct: 431  GNGSVRLWAVEGAGKGIRPLYDLPLTGFVNSLAFAKSGKFLLAGVGQEPRLGRWGHNSAA 490

Query: 1081 KNGVLLQSLSIL 1116
            +NGV +Q L +L
Sbjct: 491  RNGVAIQQLKLL 502