BLASTX nr result

ID: Coptis25_contig00024346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024346
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW81593.1| hypothetical protein ZEAMMB73_779474 [Zea mays]         44   8e-08

>gb|AFW81593.1| hypothetical protein ZEAMMB73_779474 [Zea mays]
          Length = 179

 Score = 43.9 bits (102), Expect(2) = 8e-08
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = -1

Query: 177 IAPDWRQALPE----EDS*RQNS*RWCDRHRHCYNCCKACGWWNCCSTGSQEM 31
           I  DWRQA+      ED   +    W D +R+C NC +  GWWNC     +E+
Sbjct: 116 IQADWRQAISLKKAIEDKIAKGETTWSDWNRNCDNCGRTSGWWNCSCCCQEEV 168



 Score = 37.4 bits (85), Expect(2) = 8e-08
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = -2

Query: 254 SPLQKREKLYLMAVRNFRSVDYSRSR 177
           SPLQ REKLYL+AV  +R  DYS+SR
Sbjct: 82  SPLQTREKLYLLAVGFYRIGDYSKSR 107


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