BLASTX nr result
ID: Coptis25_contig00024345
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024345 (906 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281545.1| PREDICTED: probable E3 ubiquitin-protein lig... 348 1e-93 emb|CAN65617.1| hypothetical protein VITISV_032298 [Vitis vinifera] 347 3e-93 ref|XP_002525919.1| Protein pim1, putative [Ricinus communis] gi... 342 7e-92 ref|XP_002330952.1| predicted protein [Populus trichocarpa] gi|2... 342 7e-92 ref|XP_003531879.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 336 4e-90 >ref|XP_002281545.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis vinifera] gi|298204453|emb|CBI16933.3| unnamed protein product [Vitis vinifera] Length = 478 Score = 348 bits (893), Expect = 1e-93 Identities = 161/198 (81%), Positives = 176/198 (88%) Frame = +3 Query: 312 MGVLDVLGETEQPVNNVPTKSAIYVWGYNQSGQTGRKCKEFHLRIPKHLPPELFGCPGGV 491 M + D+ GE+ +PVN +PTKSAIYVWGYNQ GQTGR KE LRIPK LPPELFGCP G Sbjct: 1 MDIGDIFGES-RPVN-IPTKSAIYVWGYNQRGQTGRNGKELQLRIPKQLPPELFGCPAGA 58 Query: 492 NARWLDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKHPQKVNQLQTEFVKSVS 671 N+RWL IACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKHP+KV QLQTEFVKS+S Sbjct: 59 NSRWLSIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKHPKKVKQLQTEFVKSIS 118 Query: 672 CGAHCTATISEPRENDGSLSTSRLWVWGQNQGSNYPRLYWGAFTPNTIVHQVSCGAVHVV 851 CGAHCTA I+EPRE +G +STSRLWVWGQNQGSNYP L+WGAFTPNTI+ QVSCGAVH V Sbjct: 119 CGAHCTAAIAEPREKNGIVSTSRLWVWGQNQGSNYPHLFWGAFTPNTIIRQVSCGAVHTV 178 Query: 852 ALSGDGLLQAWGYNEYGQ 905 ALS +GL+QAWGYNEYGQ Sbjct: 179 ALSEEGLVQAWGYNEYGQ 196 Score = 76.3 bits (186), Expect = 9e-12 Identities = 60/204 (29%), Positives = 87/204 (42%), Gaps = 20/204 (9%) Frame = +3 Query: 354 NNVPTKSAIYVWGYNQSGQTGRKCKEFHLRIPKHLPPELFGCPGGVNARWLDIACGREHT 533 N + + S ++VWG NQ P LF N ++CG HT Sbjct: 134 NGIVSTSRLWVWGQNQGSNY----------------PHLFWGAFTPNTIIRQVSCGAVHT 177 Query: 534 AAVASDGSLFTWGANDFGQLGDG-TEDGRKHPQKVNQLQTEF--------VKSVSCGAHC 686 A++ +G + WG N++GQLG G T +G + + +N F + VSCG + Sbjct: 178 VALSEEGLVQAWGYNEYGQLGRGITCEGLQGARVINAYSKFFNEAPELVKITQVSCGEYH 237 Query: 687 TATISEPRENDGSLSTSRLWVWG-QNQGS-NYPRLYWG--AFTPNTIV-------HQVSC 833 TA ISE E ++ WG N G + L +G P +V ++C Sbjct: 238 TAAISENGE---------VYTWGLGNMGQLGHCSLQYGDKELVPRRVVALDGISTKDIAC 288 Query: 834 GAVHVVALSGDGLLQAWGYNEYGQ 905 G VH AL+ G L AWG + GQ Sbjct: 289 GGVHTCALTSKGALYAWGGGQAGQ 312 Score = 72.8 bits (177), Expect = 1e-10 Identities = 58/202 (28%), Positives = 84/202 (41%), Gaps = 26/202 (12%) Frame = +3 Query: 378 IYVWGYNQSGQTGR--KCKEFH-LRIPKHLPPELFGCPGGVNARWLDIACGREHTAAVAS 548 + WGYN+ GQ GR C+ R+ P V ++CG HTAA++ Sbjct: 186 VQAWGYNEYGQLGRGITCEGLQGARVINAYSKFFNEAPELVKIT--QVSCGEYHTAAISE 243 Query: 549 DGSLFTWGANDFGQLGD-GTEDGRKH--PQKVNQLQTEFVKSVSCGAHCTATISEPREND 719 +G ++TWG + GQLG + G K P++V L K ++CG T ++ Sbjct: 244 NGEVYTWGLGNMGQLGHCSLQYGDKELVPRRVVALDGISTKDIACGGVHTCALT------ 297 Query: 720 GSLSTSRLWVWGQNQGSNY---PRLYWGAFTPN-----------------TIVHQVSCGA 839 S L+ WG Q P+ G F+ N T V ++CG Sbjct: 298 ---SKGALYAWGGGQAGQLGLGPQS--GLFSCNLNESDMLLRNIPVLVVPTGVQLIACGH 352 Query: 840 VHVVALSGDGLLQAWGYNEYGQ 905 H + DG + WGYN YGQ Sbjct: 353 SHTLISMKDGRICGWGYNSYGQ 374 >emb|CAN65617.1| hypothetical protein VITISV_032298 [Vitis vinifera] Length = 461 Score = 347 bits (889), Expect = 3e-93 Identities = 161/198 (81%), Positives = 175/198 (88%) Frame = +3 Query: 312 MGVLDVLGETEQPVNNVPTKSAIYVWGYNQSGQTGRKCKEFHLRIPKHLPPELFGCPGGV 491 M + D+ GE+ +PVN +PTKSAIYVWGYNQ GQTGR KE LRIPK LPPELFGCP G Sbjct: 1 MDIGDIFGES-RPVN-IPTKSAIYVWGYNQRGQTGRNGKELQLRIPKQLPPELFGCPAGA 58 Query: 492 NARWLDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKHPQKVNQLQTEFVKSVS 671 N+RWL IACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKHP+KV QLQTEFVKS S Sbjct: 59 NSRWLSIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKHPKKVKQLQTEFVKSXS 118 Query: 672 CGAHCTATISEPRENDGSLSTSRLWVWGQNQGSNYPRLYWGAFTPNTIVHQVSCGAVHVV 851 CGAHCTA I+EPRE +G +STSRLWVWGQNQGSNYP L+WGAFTPNTI+ QVSCGAVH V Sbjct: 119 CGAHCTAAIAEPREKNGIVSTSRLWVWGQNQGSNYPHLFWGAFTPNTIIRQVSCGAVHTV 178 Query: 852 ALSGDGLLQAWGYNEYGQ 905 ALS +GL+QAWGYNEYGQ Sbjct: 179 ALSEEGLVQAWGYNEYGQ 196 Score = 75.5 bits (184), Expect = 2e-11 Identities = 62/204 (30%), Positives = 88/204 (43%), Gaps = 20/204 (9%) Frame = +3 Query: 354 NNVPTKSAIYVWGYNQSGQTGRKCKEFHLRIPKHLPPELFGCPGGVNARWLDIACGREHT 533 N + + S ++VWG NQ P LF N ++CG HT Sbjct: 134 NGIVSTSRLWVWGQNQGSNY----------------PHLFWGAFTPNTIIRQVSCGAVHT 177 Query: 534 AAVASDGSLFTWGANDFGQLGDG-TEDGRKHPQKVNQLQ------TEFVK--SVSCGAHC 686 A++ +G + WG N++GQLG G T +G + + +N E VK VSCG + Sbjct: 178 VALSEEGLVQAWGYNEYGQLGRGITCEGLQGARVINAYSKFLNEAPELVKITQVSCGEYH 237 Query: 687 TATISEPRENDGSLSTSRLWVWG-QNQGS-NYPRLYWG--AFTPNTIV-------HQVSC 833 TA ISE E ++ WG N G + L +G P +V ++C Sbjct: 238 TAAISENGE---------VYTWGLGNMGQLGHCSLQYGDKELVPRRVVALDGISIKDIAC 288 Query: 834 GAVHVVALSGDGLLQAWGYNEYGQ 905 G VH AL+ G L AWG + GQ Sbjct: 289 GGVHTCALTSKGALYAWGGGQAGQ 312 Score = 75.5 bits (184), Expect = 2e-11 Identities = 59/202 (29%), Positives = 86/202 (42%), Gaps = 26/202 (12%) Frame = +3 Query: 378 IYVWGYNQSGQTGR--KCKEFH-LRIPKHLPPELFGCPGGVNARWLDIACGREHTAAVAS 548 + WGYN+ GQ GR C+ R+ L P V ++CG HTAA++ Sbjct: 186 VQAWGYNEYGQLGRGITCEGLQGARVINAYSKFLNEAPELVKIT--QVSCGEYHTAAISE 243 Query: 549 DGSLFTWGANDFGQLGD-GTEDGRKH--PQKVNQLQTEFVKSVSCGAHCTATISEPREND 719 +G ++TWG + GQLG + G K P++V L +K ++CG T ++ Sbjct: 244 NGEVYTWGLGNMGQLGHCSLQYGDKELVPRRVVALDGISIKDIACGGVHTCALT------ 297 Query: 720 GSLSTSRLWVWGQNQGSNY---PRLYWGAFTPN-----------------TIVHQVSCGA 839 S L+ WG Q P+ G F+ N T V ++CG Sbjct: 298 ---SKGALYAWGGGQAGQLGLGPQS--GLFSCNLNESDMLLQNIPVLVVPTGVQLIACGH 352 Query: 840 VHVVALSGDGLLQAWGYNEYGQ 905 H + DG + WGYN YGQ Sbjct: 353 SHTLISMKDGRICGWGYNSYGQ 374 >ref|XP_002525919.1| Protein pim1, putative [Ricinus communis] gi|223534748|gb|EEF36439.1| Protein pim1, putative [Ricinus communis] Length = 478 Score = 342 bits (877), Expect = 7e-92 Identities = 159/198 (80%), Positives = 176/198 (88%) Frame = +3 Query: 312 MGVLDVLGETEQPVNNVPTKSAIYVWGYNQSGQTGRKCKEFHLRIPKHLPPELFGCPGGV 491 M + +++GET N+PTKSAIYVWGYN +GQTGRK KE LRIPK L PELFGCP G Sbjct: 1 MDIDEIIGETTTRSMNLPTKSAIYVWGYNHNGQTGRKGKEQELRIPKQLSPELFGCPAGA 60 Query: 492 NARWLDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKHPQKVNQLQTEFVKSVS 671 NARWLDIACGREHTAAVASDGSLFTWGAN+FGQLGDGTE+G+K+P+KV QL+TEFVKSVS Sbjct: 61 NARWLDIACGREHTAAVASDGSLFTWGANEFGQLGDGTEEGKKYPKKVKQLETEFVKSVS 120 Query: 672 CGAHCTATISEPRENDGSLSTSRLWVWGQNQGSNYPRLYWGAFTPNTIVHQVSCGAVHVV 851 CGAHCTA I+EPRENDG++STSRLWVWGQNQGSNYPRL+ GAF NTI+ QVSCGAVHVV Sbjct: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNYPRLFSGAFALNTIICQVSCGAVHVV 180 Query: 852 ALSGDGLLQAWGYNEYGQ 905 ALS DGLLQAWGYNEYGQ Sbjct: 181 ALSEDGLLQAWGYNEYGQ 198 Score = 80.1 bits (196), Expect = 7e-13 Identities = 60/189 (31%), Positives = 84/189 (44%), Gaps = 11/189 (5%) Frame = +3 Query: 372 SAIYVWGYNQSGQTGRKCKEFHLRIPKHLPPELFGCPGGVNARWLDIACGREHTAAVASD 551 S ++VWG NQ P LF +N ++CG H A++ D Sbjct: 142 SRLWVWGQNQGSNY----------------PRLFSGAFALNTIICQVSCGAVHVVALSED 185 Query: 552 GSLFTWGANDFGQLGDG-TEDGRKHPQKVNQL------QTEFVK--SVSCGAHCTATISE 704 G L WG N++GQLG G T +G + P+ +N E VK VSCG + TA ISE Sbjct: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVINAYAKFLDEAPELVKITRVSCGEYHTAAISE 245 Query: 705 PRE--NDGSLSTSRLWVWGQNQGSNYPRLYWGAFTPNTIVHQVSCGAVHVVALSGDGLLQ 878 E G ST +L G+ ++ V+CG VH A++ G L Sbjct: 246 KGEVYTWGLGSTGQLGHTSLQSGNKELLPRRVVALDGILITDVACGGVHTCAVTQKGALY 305 Query: 879 AWGYNEYGQ 905 AWG +++GQ Sbjct: 306 AWGGSQFGQ 314 Score = 78.6 bits (192), Expect = 2e-12 Identities = 60/210 (28%), Positives = 90/210 (42%), Gaps = 34/210 (16%) Frame = +3 Query: 378 IYVWGYNQSGQTGRKCKEFHLRIPKHLPPELFGCPGGVNARWLD----------IACGRE 527 + WGYN+ GQ GR L+ P+ + A++LD ++CG Sbjct: 188 LQAWGYNEYGQLGRGITCEGLQGPRVI---------NAYAKFLDEAPELVKITRVSCGEY 238 Query: 528 HTAAVASDGSLFTWGANDFGQLGDGT-EDGRKH--PQKVNQLQTEFVKSVSCGAHCTATI 698 HTAA++ G ++TWG GQLG + + G K P++V L + V+CG T + Sbjct: 239 HTAAISEKGEVYTWGLGSTGQLGHTSLQSGNKELLPRRVVALDGILITDVACGGVHTCAV 298 Query: 699 SEPRENDGSLSTSRLWVWGQNQGSNYPRLYWG------AFTPN---------------TI 815 ++ L+ WG GS + +L G +F P+ T Sbjct: 299 TQK---------GALYAWG---GSQFGQLGLGPQTGSFSFIPSDTESFLRNIPALVFPTG 346 Query: 816 VHQVSCGAVHVVALSGDGLLQAWGYNEYGQ 905 V V+CG H + DG + WGYN YGQ Sbjct: 347 VQLVACGHSHTLICLRDGRIHGWGYNSYGQ 376 >ref|XP_002330952.1| predicted protein [Populus trichocarpa] gi|222873146|gb|EEF10277.1| predicted protein [Populus trichocarpa] Length = 462 Score = 342 bits (877), Expect = 7e-92 Identities = 161/198 (81%), Positives = 179/198 (90%) Frame = +3 Query: 312 MGVLDVLGETEQPVNNVPTKSAIYVWGYNQSGQTGRKCKEFHLRIPKHLPPELFGCPGGV 491 M + +++GET++ VN PTKSAIYVWGYNQSGQTGRK K+ LRIPK LPPELFGCP G Sbjct: 1 MDINEIVGETKRSVN-FPTKSAIYVWGYNQSGQTGRKGKDGQLRIPKQLPPELFGCPAGA 59 Query: 492 NARWLDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKHPQKVNQLQTEFVKSVS 671 NARWLDIACGREHTAAVASDGSLFTWGAN+FGQLGDGTED RK+P+KV QL+TEFVKSVS Sbjct: 60 NARWLDIACGREHTAAVASDGSLFTWGANEFGQLGDGTEDSRKYPKKVKQLETEFVKSVS 119 Query: 672 CGAHCTATISEPRENDGSLSTSRLWVWGQNQGSNYPRLYWGAFTPNTIVHQVSCGAVHVV 851 CGAHCTA I+EPR+NDG++ SRLWVWGQNQGSNYPRL+ GAF+PNTI+ QVSCGAVHVV Sbjct: 120 CGAHCTAAIAEPRQNDGTI-LSRLWVWGQNQGSNYPRLFCGAFSPNTIICQVSCGAVHVV 178 Query: 852 ALSGDGLLQAWGYNEYGQ 905 ALS DGLLQAWGYNEYGQ Sbjct: 179 ALSEDGLLQAWGYNEYGQ 196 Score = 82.4 bits (202), Expect = 1e-13 Identities = 60/200 (30%), Positives = 86/200 (43%), Gaps = 24/200 (12%) Frame = +3 Query: 378 IYVWGYNQSGQTGR--KCKEFH-LRIPKHLPPELFGCPGGVNARWLDIACGREHTAAVAS 548 + WGYN+ GQ GR C+ R+ L P V ++CG HTAA++ Sbjct: 186 LQAWGYNEYGQLGRGFTCEGLQGARVINAYAKFLDEAPELVKIT--QVSCGEYHTAAISE 243 Query: 549 DGSLFTWGANDFGQLGDGT-EDGRKH--PQKVNQLQTEFVKSVSCGAHCTATISEPREND 719 G ++TWG + GQLG + + G K P++V L F+K V+CG T ++ Sbjct: 244 KGEVYTWGLGNMGQLGHTSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAATQK---- 299 Query: 720 GSLSTSRLWVWGQNQGSNY---PRLYWGAFTPN---------------TIVHQVSCGAVH 845 L+ WG Q P+ +F P+ T V V+CG H Sbjct: 300 -----GALYAWGGGQAGQLGLGPQTGSFSFIPSESESFLRNIPALVVPTDVQHVACGHSH 354 Query: 846 VVALSGDGLLQAWGYNEYGQ 905 + DG + WGYN YGQ Sbjct: 355 TLVSMRDGRIHGWGYNSYGQ 374 Score = 70.5 bits (171), Expect = 5e-10 Identities = 62/198 (31%), Positives = 82/198 (41%), Gaps = 20/198 (10%) Frame = +3 Query: 372 SAIYVWGYNQSGQTGRKCKEFHLRIPKHLPPELFGCPGGVNARWLDIACGREHTAAVASD 551 S ++VWG NQ P LF N ++CG H A++ D Sbjct: 140 SRLWVWGQNQGSNY----------------PRLFCGAFSPNTIICQVSCGAVHVVALSED 183 Query: 552 GSLFTWGANDFGQLGDG-TEDGRKHPQKVNQL------QTEFVK--SVSCGAHCTATISE 704 G L WG N++GQLG G T +G + + +N E VK VSCG + TA ISE Sbjct: 184 GLLQAWGYNEYGQLGRGFTCEGLQGARVINAYAKFLDEAPELVKITQVSCGEYHTAAISE 243 Query: 705 PRENDGSLSTSRLWVWG-QNQGS-NYPRLYWG--AFTPNTIV-------HQVSCGAVHVV 851 E ++ WG N G + L G P +V V+CG VH Sbjct: 244 KGE---------VYTWGLGNMGQLGHTSLQSGDKELLPRRVVALDGIFIKDVACGGVHTC 294 Query: 852 ALSGDGLLQAWGYNEYGQ 905 A + G L AWG + GQ Sbjct: 295 AATQKGALYAWGGGQAGQ 312 >ref|XP_003531879.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max] Length = 474 Score = 336 bits (862), Expect = 4e-90 Identities = 156/195 (80%), Positives = 173/195 (88%) Frame = +3 Query: 321 LDVLGETEQPVNNVPTKSAIYVWGYNQSGQTGRKCKEFHLRIPKHLPPELFGCPGGVNAR 500 +D + T +PV+ VP KSAIYVWGYNQSGQTGRK KE LRIPK LPPELFGCP G NA Sbjct: 3 IDAIFGTIRPVS-VPRKSAIYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNAC 61 Query: 501 WLDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKHPQKVNQLQTEFVKSVSCGA 680 WLD+ACGREHTAA+ASDGSLFTWGANDFGQLGDGTE+ RKHP+KV QL++EFVKSVSCGA Sbjct: 62 WLDVACGREHTAAIASDGSLFTWGANDFGQLGDGTEERRKHPEKVKQLESEFVKSVSCGA 121 Query: 681 HCTATISEPRENDGSLSTSRLWVWGQNQGSNYPRLYWGAFTPNTIVHQVSCGAVHVVALS 860 HC+A I+EPRENDGS+ST RLWVWGQNQGSN PRL+WGAF PNTI+ +VSCGAVHVVALS Sbjct: 122 HCSACIAEPRENDGSISTRRLWVWGQNQGSNLPRLFWGAFKPNTIIREVSCGAVHVVALS 181 Query: 861 GDGLLQAWGYNEYGQ 905 +GLLQAWGYNE GQ Sbjct: 182 DEGLLQAWGYNECGQ 196 Score = 76.3 bits (186), Expect = 9e-12 Identities = 56/200 (28%), Positives = 83/200 (41%), Gaps = 24/200 (12%) Frame = +3 Query: 378 IYVWGYNQSGQTGR--KCKEFH-LRIPKHLPPELFGCPGGVNARWLDIACGREHTAAVAS 548 + WGYN+ GQ GR C+ I L P V ++CG HTAA++ Sbjct: 186 LQAWGYNECGQLGRGVTCEGLQGAHIISSYAKFLDEAPELVKIA--KVSCGEYHTAAISD 243 Query: 549 DGSLFTWGANDFGQLGDGT---EDGRKHPQKVNQLQTEFVKSVSCGAHCTATISEPREND 719 G ++TWG + GQLG + D P++V L F+K V+CG T +++ Sbjct: 244 KGEVYTWGLGNMGQLGHSSLQYGDKELLPRRVVTLDGIFIKDVACGGVHTCALTQG---- 299 Query: 720 GSLSTSRLWVWGQNQG---------------SNYPRLYWGAFTPNTI---VHQVSCGAVH 845 L+ WG Q +N + ++ + V V+CG H Sbjct: 300 -----GALYTWGGGQSGQLGLGPQTGLFSCVANDSQTFFRNIPVLVVPKGVQLVACGHSH 354 Query: 846 VVALSGDGLLQAWGYNEYGQ 905 + DG + WGYN YGQ Sbjct: 355 TLISMSDGRIHGWGYNNYGQ 374 Score = 65.1 bits (157), Expect = 2e-08 Identities = 58/196 (29%), Positives = 81/196 (41%), Gaps = 20/196 (10%) Frame = +3 Query: 378 IYVWGYNQSGQTGRKCKEFHLRIPKHLPPELFGCPGGVNARWLDIACGREHTAAVASDGS 557 ++VWG NQ P LF N +++CG H A++ +G Sbjct: 142 LWVWGQNQGSNL----------------PRLFWGAFKPNTIIREVSCGAVHVVALSDEGL 185 Query: 558 LFTWGANDFGQLGDG-TEDGRKHPQKVNQL------QTEFVK--SVSCGAHCTATISEPR 710 L WG N+ GQLG G T +G + ++ E VK VSCG + TA IS+ Sbjct: 186 LQAWGYNECGQLGRGVTCEGLQGAHIISSYAKFLDEAPELVKIAKVSCGEYHTAAISDKG 245 Query: 711 ENDGSLSTSRLWVWG-QNQGS-NYPRLYWG--AFTPNTIV-------HQVSCGAVHVVAL 857 E ++ WG N G + L +G P +V V+CG VH AL Sbjct: 246 E---------VYTWGLGNMGQLGHSSLQYGDKELLPRRVVTLDGIFIKDVACGGVHTCAL 296 Query: 858 SGDGLLQAWGYNEYGQ 905 + G L WG + GQ Sbjct: 297 TQGGALYTWGGGQSGQ 312