BLASTX nr result
ID: Coptis25_contig00024343
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024343 (724 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002512347.1| conserved hypothetical protein [Ricinus comm... 70 4e-10 emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera] 66 8e-09 gb|AFK44646.1| unknown [Medicago truncatula] 63 7e-08 gb|ACJ85554.1| unknown [Medicago truncatula] 63 7e-08 ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2... 61 2e-07 >ref|XP_002512347.1| conserved hypothetical protein [Ricinus communis] gi|223548308|gb|EEF49799.1| conserved hypothetical protein [Ricinus communis] Length = 475 Score = 70.1 bits (170), Expect = 4e-10 Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 7/166 (4%) Frame = +1 Query: 127 DASTVDWTQLPDELLGRVNKRLSLLDLIRCSSVCSTWKYVSSPEIHHRKNHSIWLIL-PN 303 D VDW QLPD+L+ + +RL + D +R SVC +W+++++ WL+L P Sbjct: 33 DDPPVDWLQLPDDLMKLIIQRLDVTDRLRICSVCKSWRFLATQRHVPLPPQFPWLMLSPT 92 Query: 304 VNNSGLPRFFGWDRYRYKCNRQDHYYRDGMLRFYSIMDGIAYKVQI---REGYRICGSSF 474 + + R F W R C + + F+ + G + +++ EG GSS Sbjct: 93 KSKTNRTRLFPWSDDRSTCKQ---------ITFFDTVQGKIHNLELPKSLEGGWCFGSSK 143 Query: 475 GWL-ITIGVNSDMQLF--HPFTREVLDLPSFMANSKRLRYKYSVEN 603 GWL I G + Q+F +P ++ +L LPS Y S+E+ Sbjct: 144 GWLFIAKGGKKEPQVFLLNPISKHILGLPSITTIPSYYNYLESLEH 189 >emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera] Length = 1290 Score = 65.9 bits (159), Expect = 8e-09 Identities = 57/207 (27%), Positives = 88/207 (42%), Gaps = 14/207 (6%) Frame = +1 Query: 142 DWTQLPDELLGRVNKRL-SLLDLIRCSSVCSTWKYV-SSPEIHHRKNHSIWLILPNVNNS 315 DW+++PD+ L + ++L S+ D +R VC +W + E + S WL+L NS Sbjct: 921 DWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKSPWLMLAEKENS 980 Query: 316 GLPRFFGWDRYRYKCNRQDHYYRDGMLRFYSIMDGIAYKVQIRE--GYRICGSSFGWLIT 489 + FYS + G Y++++ E G GS +GWL+T Sbjct: 981 EI------------------------RGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVT 1016 Query: 490 IGVNSDMQLFHPFTREVLDLPSFMANSKRLRYKYSVENG------IVYNGTIDTISHSPN 651 IG + DM L +P TR + LPS A S G +Y + + SP+ Sbjct: 1017 IGTDLDMCLLNPLTRVQILLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAPSSPD 1076 Query: 652 IVIIIC----GRLVREIQETMFFTRPG 720 ++I GRL FT+PG Sbjct: 1077 CAVMIIYSDYGRLA--------FTKPG 1095 >gb|AFK44646.1| unknown [Medicago truncatula] Length = 376 Score = 62.8 bits (151), Expect = 7e-08 Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 3/141 (2%) Frame = +1 Query: 145 WTQLPDELLGRVNKRLSLLDLIRCSSVCSTWKYVSSPEIHHRKNHSIWLILPNVNNSGLP 324 W LP ELL + RL+L D +R S+VC +W +V++ N S WL+ P Sbjct: 36 WADLPAELLEMIISRLALEDNVRASAVCKSWNFVANAV--RMVNQSPWLMY-------FP 86 Query: 325 RFFGWDRYRYKCNRQDHYYRDGMLRFYSIMDGIAYKVQIRE--GYRICGSSFGWLITIGV 498 +F W FY + Y ++ E G R+C + GWL+ Sbjct: 87 KFGQW------------------YEFYDPVQRKTYSIEFPELNGSRVCYTKDGWLLLYRP 128 Query: 499 NSD-MQLFHPFTREVLDLPSF 558 +D + F+PFTRE + +P F Sbjct: 129 RTDRVFFFNPFTRETIKMPRF 149 >gb|ACJ85554.1| unknown [Medicago truncatula] Length = 220 Score = 62.8 bits (151), Expect = 7e-08 Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 3/141 (2%) Frame = +1 Query: 145 WTQLPDELLGRVNKRLSLLDLIRCSSVCSTWKYVSSPEIHHRKNHSIWLILPNVNNSGLP 324 W LP ELL + RL+L D +R S+VC +W +V++ N S WL+ P Sbjct: 36 WADLPAELLEMIISRLALEDNVRASAVCKSWNFVANAV--RMVNQSPWLMY-------FP 86 Query: 325 RFFGWDRYRYKCNRQDHYYRDGMLRFYSIMDGIAYKVQIRE--GYRICGSSFGWLITIGV 498 +F W FY + Y ++ E G R+C + GWL+ Sbjct: 87 KFGQW------------------YEFYDPVQRKTYSIEFPELNGSRVCYTKDGWLLLYRP 128 Query: 499 NSD-MQLFHPFTREVLDLPSF 558 +D + F+PFTRE + +P F Sbjct: 129 RTDRVFFFNPFTRETIKMPRF 149 >ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1| predicted protein [Populus trichocarpa] Length = 393 Score = 61.2 bits (147), Expect = 2e-07 Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 4/156 (2%) Frame = +1 Query: 139 VDWTQLPDELLGRVNKRLSLL-DLIRCSSVCSTWKYVSSPEIHHRKNHSIWLILPNV--N 309 VDWTQLP EL+ ++K++++ D + +VC WK +H WL+LP N Sbjct: 3 VDWTQLPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLPPQLPWLLLPQSQSN 62 Query: 310 NSGLPRFFGWDRYRY-KCNRQDHYYRDGMLRFYSIMDGIAYKVQIREGYRICGSSFGWLI 486 S FF Y++ N + +R + CGSS GWLI Sbjct: 63 QSSYRAFFNLSTYKFHSLNLPEASHRK----------------------KHCGSSHGWLI 100 Query: 487 TIGVNSDMQLFHPFTREVLDLPSFMANSKRLRYKYS 594 + + + + +P TR + LP+ + + + Y+ Sbjct: 101 ILDDSPSILVINPLTRRKIHLPAISSFPNVVSFDYA 136