BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024329
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9SXN6.1|RBR1_TOBAC RecName: Full=Retinoblastoma-related prot...   188   3e-46
ref|XP_002529988.1| conserved hypothetical protein [Ricinus comm...   187   6e-46
sp|Q66WV0.1|RBR1_NICBE RecName: Full=Retinoblastoma-related prot...   186   1e-45
ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-...   186   2e-45
ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-li...   186   2e-45

>sp|Q9SXN6.1|RBR1_TOBAC RecName: Full=Retinoblastoma-related protein 1; Short=NtRb1
            gi|4586799|dbj|BAA76477.1| NtRb1 [Nicotiana tabacum]
          Length = 961

 Score =  188 bits (478), Expect = 3e-46
 Identities = 91/119 (76%), Positives = 103/119 (86%)
 Frame = +1

Query: 22   LVELNSFTSPLKDCLLGFNSLKPKLPGPPLQSAFASPTRPNPGGGGETCAETGINVFFTK 201
            LVE NSFTSP+KD  L  N++K K P P LQSAFASPTRPNPGGGGETCAET INVFF K
Sbjct: 678  LVERNSFTSPVKDRFLALNNIKSKFPPPALQSAFASPTRPNPGGGGETCAETAINVFFGK 737

Query: 202  ILKLAAVRINGLFERLKLNQHIRETVYCFVQQVLSQQTTLFFNRHIDQIILCSLYGVSK 378
            I+KLAAVRING+ ERL+L+Q IRETVYC  Q++LSQ+T+LFFNRHIDQIILCS YGV+K
Sbjct: 738  IVKLAAVRINGMIERLQLSQQIRETVYCLFQKILSQRTSLFFNRHIDQIILCSFYGVAK 796


>ref|XP_002529988.1| conserved hypothetical protein [Ricinus communis]
            gi|254789790|sp|B9SVG9.1|RBR_RICCO RecName:
            Full=Retinoblastoma-related protein
            gi|223530511|gb|EEF32393.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1020

 Score =  187 bits (476), Expect = 6e-46
 Identities = 95/120 (79%), Positives = 104/120 (86%), Gaps = 1/120 (0%)
 Frame = +1

Query: 22   LVELNSFTSPLKDCLLGFNSLKPKLPGPPLQSAFASPTRPNPGGGGETCAETGINVFFTK 201
            LVE NSFTSP+KD LL F +LK KLP PPLQSAFASPTRPNPGGGGETCAETGIN+FF+K
Sbjct: 687  LVERNSFTSPVKDRLLAFTNLKSKLPPPPLQSAFASPTRPNPGGGGETCAETGINIFFSK 746

Query: 202  ILKLAAVRINGLFERLKLN-QHIRETVYCFVQQVLSQQTTLFFNRHIDQIILCSLYGVSK 378
            I KLAAVRING+ ERL+ + QHIRE VY   QQVLSQQT+LFFNRHIDQIILC  YGV+K
Sbjct: 747  INKLAAVRINGMVERLQQSQQHIRENVYRLFQQVLSQQTSLFFNRHIDQIILCCFYGVAK 806


>sp|Q66WV0.1|RBR1_NICBE RecName: Full=Retinoblastoma-related protein 1; Short=NbRBR1
            gi|51538007|gb|AAU05979.1| retinoblastoma protein
            [Nicotiana benthamiana]
          Length = 1003

 Score =  186 bits (473), Expect = 1e-45
 Identities = 90/119 (75%), Positives = 102/119 (85%)
 Frame = +1

Query: 22   LVELNSFTSPLKDCLLGFNSLKPKLPGPPLQSAFASPTRPNPGGGGETCAETGINVFFTK 201
            LVE NSFTSP+KD  L  N++K K P P L SAFASPTRPNPGGGGETCAET INVFF K
Sbjct: 679  LVERNSFTSPVKDRFLALNNIKSKFPPPALHSAFASPTRPNPGGGGETCAETAINVFFGK 738

Query: 202  ILKLAAVRINGLFERLKLNQHIRETVYCFVQQVLSQQTTLFFNRHIDQIILCSLYGVSK 378
            I+KLAAVRING+ ERL+L+Q IRETVYC  Q++LSQ+T+LFFNRHIDQIILCS YGV+K
Sbjct: 739  IVKLAAVRINGMIERLQLSQQIRETVYCLFQKILSQRTSLFFNRHIDQIILCSFYGVAK 797


>ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
          Length = 1002

 Score =  186 bits (472), Expect = 2e-45
 Identities = 89/119 (74%), Positives = 103/119 (86%)
 Frame = +1

Query: 22   LVELNSFTSPLKDCLLGFNSLKPKLPGPPLQSAFASPTRPNPGGGGETCAETGINVFFTK 201
            L+E NSFTSP+KD LL FNSLK KLP PPLQSAFASPT+PNPGGGGETCAETGIN+FF K
Sbjct: 670  LMERNSFTSPVKDRLLPFNSLKSKLPPPPLQSAFASPTKPNPGGGGETCAETGINIFFGK 729

Query: 202  ILKLAAVRINGLFERLKLNQHIRETVYCFVQQVLSQQTTLFFNRHIDQIILCSLYGVSK 378
            I+KL AVRI+G+ ERL+L+Q IRE VYC  Q++L+Q T+LFFN HIDQIILC  YGV+K
Sbjct: 730  IIKLGAVRISGMVERLQLSQQIRENVYCLFQRILNQWTSLFFNHHIDQIILCCFYGVAK 788


>ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus]
          Length = 1125

 Score =  186 bits (471), Expect = 2e-45
 Identities = 88/119 (73%), Positives = 103/119 (86%)
 Frame = +1

Query: 22   LVELNSFTSPLKDCLLGFNSLKPKLPGPPLQSAFASPTRPNPGGGGETCAETGINVFFTK 201
            LVE NSFTSP+KD L+ F+S+K KL  PPLQSAFASPTRPNPGGGGETCAETGIN+FF+K
Sbjct: 793  LVERNSFTSPVKDRLMAFSSIKSKLLPPPLQSAFASPTRPNPGGGGETCAETGINIFFSK 852

Query: 202  ILKLAAVRINGLFERLKLNQHIRETVYCFVQQVLSQQTTLFFNRHIDQIILCSLYGVSK 378
            I KLAAVR+NG+ ERL+L+  IRE VYC  QQ+LSQ+T++ FNRHIDQIILC  YGV+K
Sbjct: 853  ITKLAAVRVNGMVERLQLSHQIRENVYCLFQQILSQKTSILFNRHIDQIILCCFYGVAK 911