BLASTX nr result
ID: Coptis25_contig00024329
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024329 (378 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|Q9SXN6.1|RBR1_TOBAC RecName: Full=Retinoblastoma-related prot... 188 3e-46 ref|XP_002529988.1| conserved hypothetical protein [Ricinus comm... 187 6e-46 sp|Q66WV0.1|RBR1_NICBE RecName: Full=Retinoblastoma-related prot... 186 1e-45 ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-... 186 2e-45 ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-li... 186 2e-45 >sp|Q9SXN6.1|RBR1_TOBAC RecName: Full=Retinoblastoma-related protein 1; Short=NtRb1 gi|4586799|dbj|BAA76477.1| NtRb1 [Nicotiana tabacum] Length = 961 Score = 188 bits (478), Expect = 3e-46 Identities = 91/119 (76%), Positives = 103/119 (86%) Frame = +1 Query: 22 LVELNSFTSPLKDCLLGFNSLKPKLPGPPLQSAFASPTRPNPGGGGETCAETGINVFFTK 201 LVE NSFTSP+KD L N++K K P P LQSAFASPTRPNPGGGGETCAET INVFF K Sbjct: 678 LVERNSFTSPVKDRFLALNNIKSKFPPPALQSAFASPTRPNPGGGGETCAETAINVFFGK 737 Query: 202 ILKLAAVRINGLFERLKLNQHIRETVYCFVQQVLSQQTTLFFNRHIDQIILCSLYGVSK 378 I+KLAAVRING+ ERL+L+Q IRETVYC Q++LSQ+T+LFFNRHIDQIILCS YGV+K Sbjct: 738 IVKLAAVRINGMIERLQLSQQIRETVYCLFQKILSQRTSLFFNRHIDQIILCSFYGVAK 796 >ref|XP_002529988.1| conserved hypothetical protein [Ricinus communis] gi|254789790|sp|B9SVG9.1|RBR_RICCO RecName: Full=Retinoblastoma-related protein gi|223530511|gb|EEF32393.1| conserved hypothetical protein [Ricinus communis] Length = 1020 Score = 187 bits (476), Expect = 6e-46 Identities = 95/120 (79%), Positives = 104/120 (86%), Gaps = 1/120 (0%) Frame = +1 Query: 22 LVELNSFTSPLKDCLLGFNSLKPKLPGPPLQSAFASPTRPNPGGGGETCAETGINVFFTK 201 LVE NSFTSP+KD LL F +LK KLP PPLQSAFASPTRPNPGGGGETCAETGIN+FF+K Sbjct: 687 LVERNSFTSPVKDRLLAFTNLKSKLPPPPLQSAFASPTRPNPGGGGETCAETGINIFFSK 746 Query: 202 ILKLAAVRINGLFERLKLN-QHIRETVYCFVQQVLSQQTTLFFNRHIDQIILCSLYGVSK 378 I KLAAVRING+ ERL+ + QHIRE VY QQVLSQQT+LFFNRHIDQIILC YGV+K Sbjct: 747 INKLAAVRINGMVERLQQSQQHIRENVYRLFQQVLSQQTSLFFNRHIDQIILCCFYGVAK 806 >sp|Q66WV0.1|RBR1_NICBE RecName: Full=Retinoblastoma-related protein 1; Short=NbRBR1 gi|51538007|gb|AAU05979.1| retinoblastoma protein [Nicotiana benthamiana] Length = 1003 Score = 186 bits (473), Expect = 1e-45 Identities = 90/119 (75%), Positives = 102/119 (85%) Frame = +1 Query: 22 LVELNSFTSPLKDCLLGFNSLKPKLPGPPLQSAFASPTRPNPGGGGETCAETGINVFFTK 201 LVE NSFTSP+KD L N++K K P P L SAFASPTRPNPGGGGETCAET INVFF K Sbjct: 679 LVERNSFTSPVKDRFLALNNIKSKFPPPALHSAFASPTRPNPGGGGETCAETAINVFFGK 738 Query: 202 ILKLAAVRINGLFERLKLNQHIRETVYCFVQQVLSQQTTLFFNRHIDQIILCSLYGVSK 378 I+KLAAVRING+ ERL+L+Q IRETVYC Q++LSQ+T+LFFNRHIDQIILCS YGV+K Sbjct: 739 IVKLAAVRINGMIERLQLSQQIRETVYCLFQKILSQRTSLFFNRHIDQIILCSFYGVAK 797 >ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max] Length = 1002 Score = 186 bits (472), Expect = 2e-45 Identities = 89/119 (74%), Positives = 103/119 (86%) Frame = +1 Query: 22 LVELNSFTSPLKDCLLGFNSLKPKLPGPPLQSAFASPTRPNPGGGGETCAETGINVFFTK 201 L+E NSFTSP+KD LL FNSLK KLP PPLQSAFASPT+PNPGGGGETCAETGIN+FF K Sbjct: 670 LMERNSFTSPVKDRLLPFNSLKSKLPPPPLQSAFASPTKPNPGGGGETCAETGINIFFGK 729 Query: 202 ILKLAAVRINGLFERLKLNQHIRETVYCFVQQVLSQQTTLFFNRHIDQIILCSLYGVSK 378 I+KL AVRI+G+ ERL+L+Q IRE VYC Q++L+Q T+LFFN HIDQIILC YGV+K Sbjct: 730 IIKLGAVRISGMVERLQLSQQIRENVYCLFQRILNQWTSLFFNHHIDQIILCCFYGVAK 788 >ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus] Length = 1125 Score = 186 bits (471), Expect = 2e-45 Identities = 88/119 (73%), Positives = 103/119 (86%) Frame = +1 Query: 22 LVELNSFTSPLKDCLLGFNSLKPKLPGPPLQSAFASPTRPNPGGGGETCAETGINVFFTK 201 LVE NSFTSP+KD L+ F+S+K KL PPLQSAFASPTRPNPGGGGETCAETGIN+FF+K Sbjct: 793 LVERNSFTSPVKDRLMAFSSIKSKLLPPPLQSAFASPTRPNPGGGGETCAETGINIFFSK 852 Query: 202 ILKLAAVRINGLFERLKLNQHIRETVYCFVQQVLSQQTTLFFNRHIDQIILCSLYGVSK 378 I KLAAVR+NG+ ERL+L+ IRE VYC QQ+LSQ+T++ FNRHIDQIILC YGV+K Sbjct: 853 ITKLAAVRVNGMVERLQLSHQIRENVYCLFQQILSQKTSILFNRHIDQIILCCFYGVAK 911