BLASTX nr result

ID: Coptis25_contig00024328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024328
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36674.3| unnamed protein product [Vitis vinifera]              103   2e-23
ref|XP_002299837.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-23
emb|CAN80784.1| hypothetical protein VITISV_022935 [Vitis vinifera]    99   6e-22
emb|CBI17230.3| unnamed protein product [Vitis vinifera]               99   6e-22
emb|CBI36677.3| unnamed protein product [Vitis vinifera]               97   2e-21

>emb|CBI36674.3| unnamed protein product [Vitis vinifera]
          Length = 612

 Score =  103 bits (256), Expect(2) = 2e-23
 Identities = 56/144 (38%), Positives = 84/144 (58%), Gaps = 5/144 (3%)
 Frame = +2

Query: 5   VLLLLERALHSDTPFTDVFVVKQEVASNIKLEPRIILESEKTDSDPQKSKKISLKLVASK 184
           VL LL+R+L S TP T+ F+  +E   N     R      ++     K +K+ +KL+  K
Sbjct: 330 VLYLLKRSLVSKTPMTESFLSNEENTENAASSSRSNHHETRSQRPSHKFRKMKVKLLIDK 389

Query: 185 SKNKVLYAEAGANLLDFLFSFLTFPLGSVIRLLGGNSSMGCIDNLYRSVNNFMTSEPYRE 364
           S  +VL  EA  + ++ + SFLTFPLGS+I+LL G+SS+GC+DNLYRSV +    + ++ 
Sbjct: 390 SSRRVLCLEAKEDFVNLVLSFLTFPLGSIIKLLRGHSSLGCMDNLYRSVGSSKLEDCFKS 449

Query: 365 T-----FLNPKLPQHFNCRMKKPL 421
           T      L+PKLP  F+     P+
Sbjct: 450 TKCKEMLLSPKLPMDFSLNQSLPI 473



 Score = 32.3 bits (72), Expect(2) = 2e-23
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = +1

Query: 517 VNPKSPTKETTNGGGFMKDEMIYMVTDTLDIKP 615
           +NPK P  +  +GGGF+K E + ++ D L I+P
Sbjct: 507 MNPKLPG-QAVSGGGFIKKETLLLINDDLTIQP 538



 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
 Frame = +2

Query: 152 KKISLKLVASKSKNKVLYAEAGANLLDFLFSFLTFPLGSVIRLLGGNSSMGCIDNLYRSV 331
           K+I LKL   K +N+VL+AE+  + +D LFSFLT P+G++IRL    S +GC+D LY+SV
Sbjct: 124 KQIKLKLAVDKERNRVLFAESDKDFVDILFSFLTLPIGTIIRLAERRSGIGCMDYLYKSV 183

Query: 332 ----NNFMTSEPYRETFLNPKLPQHFNCR 406
                 F+ ++  +   LNP+     +CR
Sbjct: 184 EALDEQFLETKACKTMLLNPRSAYEVHCR 212


>ref|XP_002299837.1| predicted protein [Populus trichocarpa] gi|222847095|gb|EEE84642.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score = 84.7 bits (208), Expect(2) = 2e-23
 Identities = 53/134 (39%), Positives = 76/134 (56%), Gaps = 7/134 (5%)
 Frame = +2

Query: 5   VLLLLERALHSDTPFTDVFVVKQEVAS--NIKLEPRIILESEKTDSDPQKSKKISLKLVA 178
           VL LLE +L S TP T+V + ++EV    N     RI L  E  +   +++ ++S++LV 
Sbjct: 211 VLELLECSLVSRTPLTEVLLARKEVPELRNEDSLQRISLMHEILEHQSERNAEMSVRLVV 270

Query: 179 SKSKNKVLYAEAGANLLDFLFSFLTFPLGSVIRLLGGNSSMGCIDNLYRSV-----NNFM 343
            KSK  V YAEA  + +D LFSFLT PLG ++    G  S GCI +LY SV       ++
Sbjct: 271 CKSKKVVCYAEASKDFVDLLFSFLTIPLGYLMNEKHGGKSKGCIHHLYDSVIDLDARTYL 330

Query: 344 TSEPYRETFLNPKL 385
            S   +E  LNP++
Sbjct: 331 KSNDIKEILLNPEI 344



 Score = 50.4 bits (119), Expect(2) = 2e-23
 Identities = 22/48 (45%), Positives = 32/48 (66%)
 Frame = +1

Query: 472 ESQCPHGKSGYVLEVVNPKSPTKETTNGGGFMKDEMIYMVTDTLDIKP 615
           ES CPHG +  +L +++PKSP KE T G GF+ D  ++ V+D L + P
Sbjct: 379 ESICPHGSTLQLLTIMDPKSPYKEGTEGDGFLLDPAMFTVSDDLVVTP 426



 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
 Frame = +2

Query: 158 ISLKLVASKSKNKVLYAEAGANLLDFLFSFLTFPLGSVIRLLGGNSSMG---CIDNLYRS 328
           ISLK    K  N+V++ E+    +D LFSFLT P+G++I L+   S      C++NLY+S
Sbjct: 4   ISLKASVDKKSNRVVFVESDEFFVDILFSFLTMPMGTIIHLISNLSPTNGFVCMNNLYKS 63

Query: 329 VNN----FMTSEPYRETFLNPKLPQHFNCRMKK 415
           V N    +  +E  ++  L+P       C+  K
Sbjct: 64  VENIDAMYFRTEACKQMLLHPHNAAAAYCKSLK 96


>emb|CAN80784.1| hypothetical protein VITISV_022935 [Vitis vinifera]
          Length = 504

 Score = 99.4 bits (246), Expect(2) = 6e-22
 Identities = 59/145 (40%), Positives = 85/145 (58%), Gaps = 6/145 (4%)
 Frame = +2

Query: 5   VLLLLERALHSDTPFTDVFVVKQEVASNIK-LEPRIILESEKTDSDPQKSKKISLKLVAS 181
           VL LL+R+L S TP TD F+  +E   N    EP       + D    + +K+ +KL+ +
Sbjct: 133 VLHLLKRSLLSKTPMTDTFLSNEENTENAAPFEPL-----SRPDHLENRFRKMKVKLLIN 187

Query: 182 KSKNKVLYAEAGANLLDFLFSFLTFPLGSVIRLLGGNSSMGCIDNLYRSV-----NNFMT 346
           KS  +V   EA  + ++ + SFLT PLGS+IRLL G+SS+G +DNLY+SV      +F  
Sbjct: 188 KSSRRVSCLEAKEDFMNLVLSFLTLPLGSIIRLLRGHSSLGSVDNLYKSVGRSKMEDFFN 247

Query: 347 SEPYRETFLNPKLPQHFNCRMKKPL 421
           S   ++  LNPKLP HF+   + PL
Sbjct: 248 STKSKDLLLNPKLPLHFSLNEQLPL 272



 Score = 30.8 bits (68), Expect(2) = 6e-22
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 499 GYVLEVVNPKSPTKETTNGGGFMKDEMIYMVTDTLDIKP 615
           G  L  +NPK   +E   GGGF+K E + ++ D L I+P
Sbjct: 300 GEKLCFMNPKLSGZEA-RGGGFIKKETLLLINDDLTIQP 337


>emb|CBI17230.3| unnamed protein product [Vitis vinifera]
          Length = 408

 Score = 99.4 bits (246), Expect(2) = 6e-22
 Identities = 59/145 (40%), Positives = 85/145 (58%), Gaps = 6/145 (4%)
 Frame = +2

Query: 5   VLLLLERALHSDTPFTDVFVVKQEVASNIK-LEPRIILESEKTDSDPQKSKKISLKLVAS 181
           VL LL+R+L S TP TD F+  +E   N    EP       + D    + +K+ +KL+ +
Sbjct: 133 VLHLLKRSLLSKTPMTDTFLSNEENTENAAPFEPL-----SRPDHLENRFRKMKVKLLIN 187

Query: 182 KSKNKVLYAEAGANLLDFLFSFLTFPLGSVIRLLGGNSSMGCIDNLYRSV-----NNFMT 346
           KS  +V   EA  + ++ + SFLT PLGS+IRLL G+SS+G +DNLY+SV      +F  
Sbjct: 188 KSSRRVSCLEAKEDFMNLVLSFLTLPLGSIIRLLRGHSSLGSVDNLYKSVGRSKMEDFFN 247

Query: 347 SEPYRETFLNPKLPQHFNCRMKKPL 421
           S   ++  LNPKLP HF+   + PL
Sbjct: 248 STKSKDLLLNPKLPLHFSLNEQLPL 272



 Score = 30.8 bits (68), Expect(2) = 6e-22
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 499 GYVLEVVNPKSPTKETTNGGGFMKDEMIYMVTDTLDIKP 615
           G  L  +NPK   +E   GGGF+K E + ++ D L I+P
Sbjct: 300 GEKLCFMNPKLSGQEA-RGGGFIKKETLLLINDDLTIQP 337


>emb|CBI36677.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score = 97.4 bits (241), Expect(2) = 2e-21
 Identities = 63/163 (38%), Positives = 90/163 (55%), Gaps = 11/163 (6%)
 Frame = +2

Query: 5   VLLLLERALHSDTPFTDVFVVKQEVASNIK-LEPRIILESEKTDSDPQKSKKISLKLVAS 181
           VL LL+ +L S TP TD F+  +E   N    EP       + +    + +K+ +KL+ +
Sbjct: 133 VLHLLKHSLLSKTPMTDTFLSNEENTENAAPFEPL-----SRPNHLENRFRKMKVKLLIN 187

Query: 182 KSKNKVLYAEAGANLLDFLFSFLTFPLGSVIRLLGGNSSMGCIDNLYRSV-----NNFMT 346
           KS  +VL  EA  + ++ + SFLT PLGS IRLL G+SS+G +DNLY+SV      +F  
Sbjct: 188 KSSRRVLCLEAKEDFMNLVLSFLTLPLGSTIRLLRGHSSLGSVDNLYKSVGSSKMEDFFN 247

Query: 347 SEPYRETFLNPKLPQHFNCRMKKPLLCA*VVT-----CATLFR 460
           S   ++  LNPKLP HF+   + PL     +T     CA  FR
Sbjct: 248 STKSKDLLLNPKLPLHFSLNEQLPLKDEDPITHESRRCADCFR 290



 Score = 30.8 bits (68), Expect(2) = 2e-21
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 499 GYVLEVVNPKSPTKETTNGGGFMKDEMIYMVTDTLDIKP 615
           G  L  +NPK   +E   GGGF+K E + ++ D L I+P
Sbjct: 300 GEKLCFLNPKLSGQEA-RGGGFIKKETLLLINDDLTIQP 337


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