BLASTX nr result

ID: Coptis25_contig00024319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024319
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155151.1| PREDICTED: ALBINO3-like protein 2, chloropla...   121   7e-26
ref|XP_004138896.1| PREDICTED: ALBINO3-like protein 3, mitochond...   121   7e-26
ref|XP_002512617.1| cytochrome oxidase biogenesis protein, putat...   115   4e-24
ref|XP_002273357.1| PREDICTED: ALBINO3-like protein 2, chloropla...   112   3e-23
ref|XP_003551682.1| PREDICTED: ALBINO3-like protein 2, chloropla...   109   2e-22

>ref|XP_004155151.1| PREDICTED: ALBINO3-like protein 2, chloroplastic-like [Cucumis
           sativus]
          Length = 366

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/79 (72%), Positives = 66/79 (83%)
 Frame = -1

Query: 238 IFPFLIAGLHFTNVQISFRMGSGGKDTGLLSILAKYYKHYLDILTVPLCLIGFCIPQGSL 59
           IFPFLIA LHF NVQ+SFR  S  K+TG++ ILAKYYK YL++LTVPL  IG+CIPQGSL
Sbjct: 59  IFPFLIASLHFINVQLSFRKSSLEKETGIIGILAKYYKLYLNLLTVPLFFIGYCIPQGSL 118

Query: 58  VYWVTNSSLTLVQQLSLNH 2
           VYWVTNSS T +QQL+L H
Sbjct: 119 VYWVTNSSFTAIQQLTLQH 137


>ref|XP_004138896.1| PREDICTED: ALBINO3-like protein 3, mitochondrial-like [Cucumis
           sativus]
          Length = 573

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/79 (72%), Positives = 66/79 (83%)
 Frame = -1

Query: 238 IFPFLIAGLHFTNVQISFRMGSGGKDTGLLSILAKYYKHYLDILTVPLCLIGFCIPQGSL 59
           IFPFLIA LHF NVQ+SFR  S  K+TG++ ILAKYYK YL++LTVPL  IG+CIPQGSL
Sbjct: 266 IFPFLIASLHFINVQLSFRKSSLEKETGIIGILAKYYKLYLNLLTVPLFFIGYCIPQGSL 325

Query: 58  VYWVTNSSLTLVQQLSLNH 2
           VYWVTNSS T +QQL+L H
Sbjct: 326 VYWVTNSSFTAIQQLTLQH 344


>ref|XP_002512617.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis]
           gi|223548578|gb|EEF50069.1| cytochrome oxidase
           biogenesis protein, putative [Ricinus communis]
          Length = 548

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/79 (68%), Positives = 66/79 (83%)
 Frame = -1

Query: 238 IFPFLIAGLHFTNVQISFRMGSGGKDTGLLSILAKYYKHYLDILTVPLCLIGFCIPQGSL 59
           IFP LIA LH+ N+Q++F   S  K TGLLS+LAKYYK YLD+LT+PL  IG+CIPQGSL
Sbjct: 243 IFPLLIACLHYINIQLAFEKFSVQKTTGLLSLLAKYYKLYLDLLTLPLFFIGYCIPQGSL 302

Query: 58  VYWVTNSSLTLVQQLSLNH 2
           VYWVTNSSL+++QQ+SL H
Sbjct: 303 VYWVTNSSLSVIQQMSLKH 321


>ref|XP_002273357.1| PREDICTED: ALBINO3-like protein 2, chloroplastic [Vitis vinifera]
           gi|297735304|emb|CBI17666.3| unnamed protein product
           [Vitis vinifera]
          Length = 572

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/79 (68%), Positives = 63/79 (79%)
 Frame = -1

Query: 238 IFPFLIAGLHFTNVQISFRMGSGGKDTGLLSILAKYYKHYLDILTVPLCLIGFCIPQGSL 59
           IFP LI+GLHF NVQISF   S G+  GLL +LAKYYK YL+ILTVP+   GF IPQGSL
Sbjct: 244 IFPILISGLHFINVQISFSTSSVGQVPGLLGLLAKYYKFYLEILTVPIFFTGFYIPQGSL 303

Query: 58  VYWVTNSSLTLVQQLSLNH 2
           VYWVTNSSL+ +QQL++ H
Sbjct: 304 VYWVTNSSLSAIQQLTIRH 322


>ref|XP_003551682.1| PREDICTED: ALBINO3-like protein 2, chloroplastic-like [Glycine max]
          Length = 500

 Score =  109 bits (273), Expect = 2e-22
 Identities = 49/79 (62%), Positives = 61/79 (77%)
 Frame = -1

Query: 238 IFPFLIAGLHFTNVQISFRMGSGGKDTGLLSILAKYYKHYLDILTVPLCLIGFCIPQGSL 59
           IFPFLIAGLH+  VQISFR     +   +  +LAK+YK YLD LT+P+ + GFCIPQGS 
Sbjct: 175 IFPFLIAGLHYVTVQISFRKPLVAETRDIFDLLAKFYKQYLDFLTIPIAITGFCIPQGSQ 234

Query: 58  VYWVTNSSLTLVQQLSLNH 2
           +YWVTNSSLTL+QQ++L H
Sbjct: 235 LYWVTNSSLTLIQQITLRH 253


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