BLASTX nr result

ID: Coptis25_contig00024314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024314
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237363.1| uncharacterized protein LOC100500138 [Glycin...   211   5e-53
ref|XP_003523692.1| PREDICTED: uncharacterized protein LOC100784...   208   5e-52
ref|XP_004138732.1| PREDICTED: uncharacterized protein LOC101218...   202   2e-50
ref|XP_002515540.1| conserved hypothetical protein [Ricinus comm...   202   2e-50
gb|ABK96125.1| unknown [Populus trichocarpa] gi|118489048|gb|ABK...   199   2e-49

>ref|NP_001237363.1| uncharacterized protein LOC100500138 [Glycine max]
           gi|255629430|gb|ACU15061.1| unknown [Glycine max]
          Length = 228

 Score =  211 bits (538), Expect = 5e-53
 Identities = 114/170 (67%), Positives = 126/170 (74%), Gaps = 3/170 (1%)
 Frame = -2

Query: 501 SVSAMAS---SRKWTNNITSIASRVFFLLIIFQVPLFRVTCRSGXXXXXXXXXXXXXXXX 331
           SVS MA+   S KWT NI+SIA+R+FFLLIIFQ+PLFRVTCRSG                
Sbjct: 16  SVSTMATPKASSKWTENISSIAARIFFLLIIFQIPLFRVTCRSG---------------- 59

Query: 330 XXXXXXXXRSGMCTTPIEVTSSQLIASEIFPFGVVKALLYPGAVANGLIRNRTVPKWDNV 151
                      MCTTP+ VTSSQLIASEIFP  VVK LLYPGA  NGLI N TVP WDN+
Sbjct: 60  -----------MCTTPLHVTSSQLIASEIFPVVVVKGLLYPGAAVNGLIHNMTVPSWDNL 108

Query: 150 LNIYNLTEVKEASPVTDLQRLEVLAGSYFSVAGALVGLLKPGRMSMFGTL 1
           L++YNLT VKEAS VTDLQRLEVLAGSYF+VAGALVG+LKPGRMSMFG+L
Sbjct: 109 LDLYNLTSVKEASAVTDLQRLEVLAGSYFTVAGALVGILKPGRMSMFGSL 158


>ref|XP_003523692.1| PREDICTED: uncharacterized protein LOC100784749 [Glycine max]
          Length = 245

 Score =  208 bits (529), Expect = 5e-52
 Identities = 112/170 (65%), Positives = 126/170 (74%), Gaps = 3/170 (1%)
 Frame = -2

Query: 501 SVSAMASSR---KWTNNITSIASRVFFLLIIFQVPLFRVTCRSGXXXXXXXXXXXXXXXX 331
           SVS MA+     KWT+N++SIASR+FFLLIIFQ+PLFRVTCRSG                
Sbjct: 33  SVSTMATPTAPSKWTDNVSSIASRIFFLLIIFQIPLFRVTCRSG---------------- 76

Query: 330 XXXXXXXXRSGMCTTPIEVTSSQLIASEIFPFGVVKALLYPGAVANGLIRNRTVPKWDNV 151
                      MCTTP+ VTSSQLIASEIFP  VVK LLYPGA  NGLI N TVP WD++
Sbjct: 77  -----------MCTTPLHVTSSQLIASEIFPVVVVKGLLYPGAAVNGLIHNMTVPSWDSL 125

Query: 150 LNIYNLTEVKEASPVTDLQRLEVLAGSYFSVAGALVGLLKPGRMSMFGTL 1
           L++YNLT VKEAS VTDLQRLEVLAGSYF+VAGALVG+LKPGRMSMFG+L
Sbjct: 126 LDLYNLTGVKEASAVTDLQRLEVLAGSYFTVAGALVGILKPGRMSMFGSL 175


>ref|XP_004138732.1| PREDICTED: uncharacterized protein LOC101218289 [Cucumis sativus]
           gi|449523273|ref|XP_004168648.1| PREDICTED:
           uncharacterized LOC101218289 [Cucumis sativus]
          Length = 215

 Score =  202 bits (515), Expect = 2e-50
 Identities = 106/169 (62%), Positives = 121/169 (71%)
 Frame = -2

Query: 507 SISVSAMASSRKWTNNITSIASRVFFLLIIFQVPLFRVTCRSGXXXXXXXXXXXXXXXXX 328
           S S S   +S+ W  N++SIASRV+FLLII Q+PLFR++CRSG                 
Sbjct: 4   STSSSTSTASKSWIRNLSSIASRVYFLLIILQIPLFRISCRSG----------------- 46

Query: 327 XXXXXXXRSGMCTTPIEVTSSQLIASEIFPFGVVKALLYPGAVANGLIRNRTVPKWDNVL 148
                     MCT+P+ VTSSQLIASE+FP  VVKALLYPGAV NGL+ N TVP W N+ 
Sbjct: 47  ----------MCTSPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSNLF 96

Query: 147 NIYNLTEVKEASPVTDLQRLEVLAGSYFSVAGALVGLLKPGRMSMFGTL 1
           +IYNLT +KEAS VTDLQRLEVLAGSYFSVAGA VGLLKPGRMSMFGTL
Sbjct: 97  DIYNLTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTL 145


>ref|XP_002515540.1| conserved hypothetical protein [Ricinus communis]
           gi|223545484|gb|EEF46989.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 212

 Score =  202 bits (515), Expect = 2e-50
 Identities = 106/165 (64%), Positives = 121/165 (73%)
 Frame = -2

Query: 495 SAMASSRKWTNNITSIASRVFFLLIIFQVPLFRVTCRSGXXXXXXXXXXXXXXXXXXXXX 316
           +A A+SR W  N+ SIASR++F L+I QVPLFR+ CRSG                     
Sbjct: 5   AATAASRGWVRNLPSIASRIYFFLVILQVPLFRIPCRSG--------------------- 43

Query: 315 XXXRSGMCTTPIEVTSSQLIASEIFPFGVVKALLYPGAVANGLIRNRTVPKWDNVLNIYN 136
                 MC+TPI VTSSQLIASEIFP  VVKALLYPGA+ANGL+RN TVP W+++L+IYN
Sbjct: 44  ------MCSTPIHVTSSQLIASEIFPAPVVKALLYPGAIANGLVRNMTVPSWNSLLDIYN 97

Query: 135 LTEVKEASPVTDLQRLEVLAGSYFSVAGALVGLLKPGRMSMFGTL 1
           LT  KEA  VTDLQRLEVLAGSYFSVAGALVG+LKPGRMSMFGTL
Sbjct: 98  LTNAKEAPAVTDLQRLEVLAGSYFSVAGALVGILKPGRMSMFGTL 142


>gb|ABK96125.1| unknown [Populus trichocarpa] gi|118489048|gb|ABK96331.1| unknown
           [Populus trichocarpa x Populus deltoides]
          Length = 220

 Score =  199 bits (507), Expect = 2e-49
 Identities = 104/165 (63%), Positives = 116/165 (70%)
 Frame = -2

Query: 495 SAMASSRKWTNNITSIASRVFFLLIIFQVPLFRVTCRSGXXXXXXXXXXXXXXXXXXXXX 316
           +A    R W +N+TS A+R++F +I  QVPLFR+ CRSG                     
Sbjct: 13  TATTRRRSWVSNLTSYAARIYFFIIFLQVPLFRIPCRSG--------------------- 51

Query: 315 XXXRSGMCTTPIEVTSSQLIASEIFPFGVVKALLYPGAVANGLIRNRTVPKWDNVLNIYN 136
                 MC+TPI VTSSQLIASEIFP  VVKALLYPGAV NGL+RN TVP WD +LNIYN
Sbjct: 52  ------MCSTPIHVTSSQLIASEIFPVPVVKALLYPGAVVNGLVRNMTVPSWDKLLNIYN 105

Query: 135 LTEVKEASPVTDLQRLEVLAGSYFSVAGALVGLLKPGRMSMFGTL 1
           LT  KEA  VTDLQRLEVLAGSYFSVAGALVG+LKPGRMSMFGTL
Sbjct: 106 LTSAKEAPAVTDLQRLEVLAGSYFSVAGALVGILKPGRMSMFGTL 150


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