BLASTX nr result
ID: Coptis25_contig00024311
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024311 (274 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003590829.1| Harpin binding protein [Medicago truncatula]... 62 5e-08 gb|AAR26486.1| harpin binding protein 1 [Solanum tuberosum] 62 5e-08 gb|AAR26483.1| harpin binding protein 1 [Nicotiana tabacum] 62 6e-08 ref|NP_001234460.1| harpin binding protein 1 [Solanum lycopersic... 62 6e-08 gb|AFK33711.1| unknown [Lotus japonicus] 61 8e-08 >ref|XP_003590829.1| Harpin binding protein [Medicago truncatula] gi|355479877|gb|AES61080.1| Harpin binding protein [Medicago truncatula] Length = 276 Score = 62.0 bits (149), Expect = 5e-08 Identities = 27/33 (81%), Positives = 32/33 (96%) Frame = +3 Query: 6 NNRGRGEFEVTYIDADTRITRGDRGELRVFVIS 104 +NRG G+FEVTY+DADTR+TRGDRGELRVFVI+ Sbjct: 244 SNRGSGDFEVTYLDADTRVTRGDRGELRVFVIA 276 >gb|AAR26486.1| harpin binding protein 1 [Solanum tuberosum] Length = 275 Score = 62.0 bits (149), Expect = 5e-08 Identities = 28/33 (84%), Positives = 31/33 (93%) Frame = +3 Query: 6 NNRGRGEFEVTYIDADTRITRGDRGELRVFVIS 104 +N G GEFEVTYID+DTR+TRGDRGELRVFVIS Sbjct: 243 SNTGNGEFEVTYIDSDTRVTRGDRGELRVFVIS 275 >gb|AAR26483.1| harpin binding protein 1 [Nicotiana tabacum] Length = 276 Score = 61.6 bits (148), Expect = 6e-08 Identities = 28/33 (84%), Positives = 31/33 (93%) Frame = +3 Query: 6 NNRGRGEFEVTYIDADTRITRGDRGELRVFVIS 104 +N G GEFEVTYID+DTR+TRGDRGELRVFVIS Sbjct: 244 SNTGSGEFEVTYIDSDTRVTRGDRGELRVFVIS 276 >ref|NP_001234460.1| harpin binding protein 1 [Solanum lycopersicum] gi|38679319|gb|AAR26481.1| harpin binding protein 1 [Solanum lycopersicum] Length = 276 Score = 61.6 bits (148), Expect = 6e-08 Identities = 28/33 (84%), Positives = 31/33 (93%) Frame = +3 Query: 6 NNRGRGEFEVTYIDADTRITRGDRGELRVFVIS 104 +N G GEFEVTYID+DTR+TRGDRGELRVFVIS Sbjct: 244 SNTGSGEFEVTYIDSDTRVTRGDRGELRVFVIS 276 >gb|AFK33711.1| unknown [Lotus japonicus] Length = 287 Score = 61.2 bits (147), Expect = 8e-08 Identities = 27/34 (79%), Positives = 33/34 (97%) Frame = +3 Query: 3 SNNRGRGEFEVTYIDADTRITRGDRGELRVFVIS 104 S+NRG GEFEVT++D+DTRITRGD+GELRVFVI+ Sbjct: 254 SSNRGSGEFEVTFLDSDTRITRGDKGELRVFVIA 287