BLASTX nr result

ID: Coptis25_contig00024311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024311
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590829.1| Harpin binding protein [Medicago truncatula]...    62   5e-08
gb|AAR26486.1| harpin binding protein 1 [Solanum tuberosum]            62   5e-08
gb|AAR26483.1| harpin binding protein 1 [Nicotiana tabacum]            62   6e-08
ref|NP_001234460.1| harpin binding protein 1 [Solanum lycopersic...    62   6e-08
gb|AFK33711.1| unknown [Lotus japonicus]                               61   8e-08

>ref|XP_003590829.1| Harpin binding protein [Medicago truncatula]
           gi|355479877|gb|AES61080.1| Harpin binding protein
           [Medicago truncatula]
          Length = 276

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/33 (81%), Positives = 32/33 (96%)
 Frame = +3

Query: 6   NNRGRGEFEVTYIDADTRITRGDRGELRVFVIS 104
           +NRG G+FEVTY+DADTR+TRGDRGELRVFVI+
Sbjct: 244 SNRGSGDFEVTYLDADTRVTRGDRGELRVFVIA 276


>gb|AAR26486.1| harpin binding protein 1 [Solanum tuberosum]
          Length = 275

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +3

Query: 6   NNRGRGEFEVTYIDADTRITRGDRGELRVFVIS 104
           +N G GEFEVTYID+DTR+TRGDRGELRVFVIS
Sbjct: 243 SNTGNGEFEVTYIDSDTRVTRGDRGELRVFVIS 275


>gb|AAR26483.1| harpin binding protein 1 [Nicotiana tabacum]
          Length = 276

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +3

Query: 6   NNRGRGEFEVTYIDADTRITRGDRGELRVFVIS 104
           +N G GEFEVTYID+DTR+TRGDRGELRVFVIS
Sbjct: 244 SNTGSGEFEVTYIDSDTRVTRGDRGELRVFVIS 276


>ref|NP_001234460.1| harpin binding protein 1 [Solanum lycopersicum]
           gi|38679319|gb|AAR26481.1| harpin binding protein 1
           [Solanum lycopersicum]
          Length = 276

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +3

Query: 6   NNRGRGEFEVTYIDADTRITRGDRGELRVFVIS 104
           +N G GEFEVTYID+DTR+TRGDRGELRVFVIS
Sbjct: 244 SNTGSGEFEVTYIDSDTRVTRGDRGELRVFVIS 276


>gb|AFK33711.1| unknown [Lotus japonicus]
          Length = 287

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/34 (79%), Positives = 33/34 (97%)
 Frame = +3

Query: 3   SNNRGRGEFEVTYIDADTRITRGDRGELRVFVIS 104
           S+NRG GEFEVT++D+DTRITRGD+GELRVFVI+
Sbjct: 254 SSNRGSGEFEVTFLDSDTRITRGDKGELRVFVIA 287


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