BLASTX nr result

ID: Coptis25_contig00024308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024308
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268902.1| PREDICTED: putative phytosulfokines 6 [Vitis...    78   2e-12
ref|NP_001236307.1| uncharacterized protein LOC100306271 precurs...    77   2e-12
emb|CAN62427.1| hypothetical protein VITISV_034841 [Vitis vinifera]    71   1e-10
ref|XP_003541446.1| PREDICTED: putative phytosulfokines 6-like [...    68   1e-09
ref|XP_002328074.1| predicted protein [Populus trichocarpa] gi|1...    68   1e-09

>ref|XP_002268902.1| PREDICTED: putative phytosulfokines 6 [Vitis vinifera]
           gi|297734849|emb|CBI17083.3| unnamed protein product
           [Vitis vinifera]
          Length = 96

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 37/68 (54%), Positives = 46/68 (67%)
 Frame = -3

Query: 450 RFLIPIQGEKEHSVHEFPQKSPVLEIEQEDKSDDLMGMEHCENKDEECINRRMTAEAHLD 271
           R LI  QGE+   + E      +LE+E  D  + LMG+E CEN DEEC+ RR+ +EAHLD
Sbjct: 28  RLLITKQGEEGVKLKELINGVSLLEMEGNDSFEQLMGVEDCENGDEECLKRRIISEAHLD 87

Query: 270 YIYTQHHK 247
           YIYTQHHK
Sbjct: 88  YIYTQHHK 95


>ref|NP_001236307.1| uncharacterized protein LOC100306271 precursor [Glycine max]
           gi|23466381|tpg|DAA00281.1| TPA_exp: putative
           phytosulfokine peptide precursor [Glycine max]
           gi|255628063|gb|ACU14376.1| unknown [Glycine max]
          Length = 92

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 40/66 (60%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
 Frame = -3

Query: 438 PIQGEKEHSVHE--FPQKSPVLEIEQEDKSDDLMGMEHCENKDEECINRRMTAEAHLDYI 265
           P QGEKE  ++E  FPQ S     E +D  ++LMG E C  KDEECI+RRM  EAHLDYI
Sbjct: 30  PRQGEKEVEINENAFPQSSH----ELKDDMEELMGSEECYMKDEECISRRMMVEAHLDYI 85

Query: 264 YTQHHK 247
           YTQHHK
Sbjct: 86  YTQHHK 91


>emb|CAN62427.1| hypothetical protein VITISV_034841 [Vitis vinifera]
          Length = 102

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
 Frame = -3

Query: 450 RFLIPIQGEKEHSVHEFPQKSPVLEIEQEDKSD------DLMGMEHCENKDEECINRRMT 289
           R LI  QGE+   + E      +LE+E  D  +       LMG+E CEN DEEC+ RR+ 
Sbjct: 28  RLLITKQGEEGVKLKELINGVSLLEMEGNDSFEFCDTLQQLMGVEDCENGDEECLKRRII 87

Query: 288 AEAHLDYIYTQHHK 247
           +EAHLDYIYTQHHK
Sbjct: 88  SEAHLDYIYTQHHK 101


>ref|XP_003541446.1| PREDICTED: putative phytosulfokines 6-like [Glycine max]
          Length = 89

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 35/64 (54%), Positives = 40/64 (62%)
 Frame = -3

Query: 438 PIQGEKEHSVHEFPQKSPVLEIEQEDKSDDLMGMEHCENKDEECINRRMTAEAHLDYIYT 259
           P QGEKE  V+E         I Q    ++L+G E C  KDEEC +RRM  EAHLDYIYT
Sbjct: 32  PRQGEKEVEVNENA-------IPQSSDMEELIGSEECYMKDEECTSRRMMVEAHLDYIYT 84

Query: 258 QHHK 247
           QHHK
Sbjct: 85  QHHK 88


>ref|XP_002328074.1| predicted protein [Populus trichocarpa] gi|118482092|gb|ABK92977.1|
           unknown [Populus trichocarpa]
           gi|222837589|gb|EEE75954.1| predicted protein [Populus
           trichocarpa]
          Length = 95

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
 Frame = -3

Query: 450 RFLIPIQGEKEHSVHEFPQKSPVLEIEQEDK-SDDLMGMEHCENKDEECINRRMTAEAHL 274
           RFL+  QG+++ ++ E   +    + E  +  ++ LMG+E C   DEEC  RR+ AEAHL
Sbjct: 26  RFLLSKQGKEDLNLKEITSEGTFAQTEDSELITNQLMGLEVCRGGDEECFKRRIIAEAHL 85

Query: 273 DYIYTQHHK 247
           DYIYTQHHK
Sbjct: 86  DYIYTQHHK 94


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