BLASTX nr result

ID: Coptis25_contig00024302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024302
         (1291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ14299.1| hypothetical protein OsJ_04225 [Oryza sativa Japo...   299   1e-78
ref|XP_003589508.1| FAR1-related protein [Medicago truncatula] g...   292   1e-76
ref|XP_003623738.1| FAR1-related protein [Medicago truncatula] g...   291   3e-76
ref|XP_002283202.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...   273   9e-71
ref|XP_002263941.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...   270   5e-70

>gb|EAZ14299.1| hypothetical protein OsJ_04225 [Oryza sativa Japonica Group]
          Length = 357

 Score =  299 bits (765), Expect = 1e-78
 Identities = 147/319 (46%), Positives = 203/319 (63%), Gaps = 1/319 (0%)
 Frame = -3

Query: 1052 VGMIFESEDDSYEKYNEFARKVGFGIRKGNSYKRPDGTVRSRVFVCFKEGFRQNDHRAKN 873
            +GM F+ ED +YE YN +A  VGF IRK    K     +R++ FVC +EGF + +     
Sbjct: 39   IGMEFDDEDIAYEFYNRYAGDVGFSIRKFWHDKSSTNVIRTKKFVCSREGFNKRNTSDAC 98

Query: 872  VREHKETRTGCKARMMIKQNED-EWVASSITFEHNHLLLTPKKASMLRSHRSMKDVHKGE 696
             R+  +TR GC A M IK     ++  +S +  HNH L+TP KA +LRS R M +  K +
Sbjct: 99   QRKRADTRVGCMAEMTIKITPTGKYAIASFSNTHNHELITPSKAHLLRSQRRMTEAQKAQ 158

Query: 695  IQILNAVGIPPVDGFDYMVQQGGGHVNVGITQVDYKKILRRKRAEELKLGDASALVNYFT 516
            I ILN  G+ P +G + M +Q GG  ++  T+ DYK  LR KR + ++ GD  A++ Y  
Sbjct: 159  IDILNDSGVRPKEGHEVMSRQAGGRQSLTFTRKDYKNYLRSKRMKSIQEGDTGAILQYLQ 218

Query: 515  RKKIENSCFFYDIMFDDENQVTNLFWADAMSIIDYNHFGNVVVFYTTYRTNKYGRSFAPF 336
             K++EN  FFY I  D++  +TN+FWADA S++D+++ G+V+ F TTYRTN YGR FA F
Sbjct: 219  DKQMENPSFFYAIQVDEDEMMTNIFWADARSVLDFDYLGDVICFDTTYRTNNYGRPFALF 278

Query: 335  VGVNHHKESVFLGGALLIDEMAKSFVWLFETWMKAMDGKKPRTIFTDQCPSMAKAIAQVF 156
            VGVNHHK++V  G ALL DE   +F WLFET+ +AM GK+PRTI TDQC ++  AI  VF
Sbjct: 279  VGVNHHKQTVVFGAALLYDETTSTFEWLFETFKRAMSGKEPRTILTDQCAAIINAIGTVF 338

Query: 155  PVLEINRRLCLWHIFFNGA 99
            P      RLC+WH++ N A
Sbjct: 339  P--NSTHRLCVWHMYQNAA 355


>ref|XP_003589508.1| FAR1-related protein [Medicago truncatula]
            gi|355478556|gb|AES59759.1| FAR1-related protein
            [Medicago truncatula]
          Length = 793

 Score =  292 bits (747), Expect = 1e-76
 Identities = 164/381 (43%), Positives = 229/381 (60%), Gaps = 8/381 (2%)
 Frame = -3

Query: 1130 NKIEDNVELMVEDEE--GNMKNANDMVYVGMIFESEDDSYEKYNEFARKVGFGIRK--GN 963
            N ++  V  ++E+ E  G    A+    + MIFESE  +YE YNE+++++GFGIR+  GN
Sbjct: 10   NSVDKLVNTILEENEEHGQESIADIKPRLDMIFESEVAAYEFYNEYSKRIGFGIRREYGN 69

Query: 962  SYKRPDGTVRSRVFVCFKEGFRQNDHRAKNVREHK-ETRTGCKARMMIKQNED--EWVAS 792
              K+ DG + SR F C+KEG R  D R +   E   ETRTGC ARM I  +    ++   
Sbjct: 70   KSKK-DGVLTSRRFTCYKEGTRSVDKRRQPTGESTAETRTGCNARMGISLDRKIGKYKVV 128

Query: 791  SITFEHNHLLLTPKKASMLRSHRSMKDVHKGEIQILNAVGIPPVDGFDYMVQQGGGHVNV 612
                EHNHLL   +   M+RSHR + +V   +I + +  G+ P +  +YM +Q GG   V
Sbjct: 129  DFVLEHNHLLQPQEYVHMIRSHRRISEVQASQIIMGDESGLRPKELHEYMSKQAGGIEMV 188

Query: 611  GITQVDYKKILRRKRAEELKLGDASALVNYFTRKKIENSCFFYDIMFDDENQVTNLFWAD 432
            G T+ D K +LR KR + LK G+  AL+ YF +++ +N  FFYD   D E Q+TN+FWAD
Sbjct: 189  GFTRTDAKNLLRTKRMDSLKYGEVGALMTYF-KQESKNPSFFYDFQMDVEEQITNIFWAD 247

Query: 431  AMSIIDYNHFGNVVVFYTTYRTNKYGRSFAPFVGVNHHKESVFLGGALLIDEMAKSFVWL 252
            A  I DY +FG+VV F TTY+TNK  R    FVG+N+H++++  G  LL DE   SF WL
Sbjct: 248  AQMINDYGYFGDVVTFDTTYKTNKGYRPLGVFVGLNNHRQTIIFGATLLYDETIPSFQWL 307

Query: 251  FETWMKAMDGKKPRTIFTDQCPSMAKAIAQVFPVLEINRRLCLWHIFFNGAKHLSHVY-K 75
            FET++KA+ GKKP+TI TDQ  +MAK I+ V P  E    LC WHI  N  +H++H+Y +
Sbjct: 308  FETFLKAIGGKKPKTILTDQDAAMAKGISLVMP--ETFHGLCTWHIRQNALRHVNHLYQR 365

Query: 74   VDGFTKTLKRCIYNSETVEEF 12
               F    + CI   E  +EF
Sbjct: 366  SKHFCSDFEACIDLHEEEDEF 386


>ref|XP_003623738.1| FAR1-related protein [Medicago truncatula]
            gi|355498753|gb|AES79956.1| FAR1-related protein
            [Medicago truncatula]
          Length = 793

 Score =  291 bits (744), Expect = 3e-76
 Identities = 164/381 (43%), Positives = 228/381 (59%), Gaps = 8/381 (2%)
 Frame = -3

Query: 1130 NKIEDNVELMVEDEE--GNMKNANDMVYVGMIFESEDDSYEKYNEFARKVGFGIRK--GN 963
            N ++  V  ++E+ E  G    A+    + MIFESE  +YE YNE+++++GFGIR+  GN
Sbjct: 10   NSVDKLVNTILEENEEHGQESIADIKPCLDMIFESEVAAYEFYNEYSKRIGFGIRREYGN 69

Query: 962  SYKRPDGTVRSRVFVCFKEGFRQNDHRAKNVREHK-ETRTGCKARMMIKQNED--EWVAS 792
              K+ DG + SR F C+KEG R  D R +   E   ETRTGC ARM I  +    ++   
Sbjct: 70   KSKK-DGVLTSRRFTCYKEGTRSVDKRRQPTGESTAETRTGCNARMGISLDRKIGKYKVV 128

Query: 791  SITFEHNHLLLTPKKASMLRSHRSMKDVHKGEIQILNAVGIPPVDGFDYMVQQGGGHVNV 612
                EHNHLL   +   M+RSHR + +V   +I + +  G+ P +  +YM +Q GG   V
Sbjct: 129  DFVLEHNHLLQPQEYVHMIRSHRRISEVQASQIIMGDESGLRPKELHEYMSKQAGGIEMV 188

Query: 611  GITQVDYKKILRRKRAEELKLGDASALVNYFTRKKIENSCFFYDIMFDDENQVTNLFWAD 432
            G T+ D K +LR KR + LK G+  AL+ YF +++ +N  FFYD   D E Q+TN+FWAD
Sbjct: 189  GFTRTDAKNLLRTKRMDSLKYGEVGALMTYF-KQESKNPSFFYDFQMDVEEQITNIFWAD 247

Query: 431  AMSIIDYNHFGNVVVFYTTYRTNKYGRSFAPFVGVNHHKESVFLGGALLIDEMAKSFVWL 252
            A  I DY +FG+VV F TTY+TNK  R     VG+N+H++++  G  LL DE   SF WL
Sbjct: 248  AQMINDYGYFGDVVTFDTTYKTNKGYRPLGVVVGLNNHRQTIIFGATLLYDETIPSFQWL 307

Query: 251  FETWMKAMDGKKPRTIFTDQCPSMAKAIAQVFPVLEINRRLCLWHIFFNGAKHLSHVY-K 75
            FET++KAM GKKP+TI TDQ  +MAK I+ V P  E    LC WHI  N  +H++H+Y +
Sbjct: 308  FETFLKAMGGKKPKTILTDQDAAMAKGISLVMP--ETFHGLCTWHIRQNALRHVNHLYQR 365

Query: 74   VDGFTKTLKRCIYNSETVEEF 12
               F    + CI   E  +EF
Sbjct: 366  SKHFCSDFEACIDLHEEEDEF 386


>ref|XP_002283202.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 783

 Score =  273 bits (697), Expect = 9e-71
 Identities = 151/357 (42%), Positives = 205/357 (57%), Gaps = 7/357 (1%)
 Frame = -3

Query: 1055 YVGMIFESEDDSYEKYNEFARKVGFGIRKGNSYK-RPDGTVRSRVFVCFKEGFRQNDHRA 879
            Y GM FESE+ +   YN +AR+VGF  R  +S + R DG +  R FVC KEGFR  + + 
Sbjct: 62   YEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRSFVCAKEGFRNLNEKR 121

Query: 878  KNVREHKE----TRTGCKARMMIK-QNEDEWVASSITFEHNHLLLTPKKASMLRSHRSMK 714
               RE K     TR GCKA + +K Q+  +WV S  T EHNH L+ P K   LRSHR + 
Sbjct: 122  TKDREIKRPRTITRVGCKASLSVKIQDSGKWVVSGFTKEHNHELVPPDKVHCLRSHRQIS 181

Query: 713  DVHKGEIQILNAVGIPPVDGFDYMVQQGGGHVNVGITQVDYKKILRRKRAEELKLGDASA 534
               K  I  L A G+ P      ++++ GG   VG T+VD +  +R  R   L+ GD   
Sbjct: 182  GPAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQRSLE-GDIQL 240

Query: 533  LVNYFTRKKIENSCFFYDIMFDDENQVTNLFWADAMSIIDYNHFGNVVVFYTTYRTNKYG 354
            L++Y  +   EN  F Y +  DD+   +N+FWAD  S ++Y +FG+ V F TTYR+N+Y 
Sbjct: 241  LLDYLRQMHAENPSFVYAVQGDDDQSPSNVFWADPKSRMNYTYFGDTVTFDTTYRSNRYR 300

Query: 353  RSFAPFVGVNHHKESVFLGGALLIDEMAKSFVWLFETWMKAMDGKKPRTIFTDQCPSMAK 174
              FAPF GVNHH + V  G A LI+E   SF+WLF+TW+ AM G+ P +I TD    +  
Sbjct: 301  LPFAPFTGVNHHGQPVLFGCAFLINESEASFIWLFKTWLMAMSGRPPVSITTDHDAVIGL 360

Query: 173  AIAQVFPVLEINRRLCLWHIFFNGAKHLSHVY-KVDGFTKTLKRCIYNSETVEEFES 6
            AI+QVFP  E   R C WHIF    + LSHV+ +   F     +C+  +++ EEFES
Sbjct: 361  AISQVFP--ETRHRFCKWHIFKKCQEKLSHVFLRHPTFEADFHKCVNLTDSTEEFES 415


>ref|XP_002263941.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 773

 Score =  270 bits (691), Expect = 5e-70
 Identities = 153/359 (42%), Positives = 203/359 (56%), Gaps = 9/359 (2%)
 Frame = -3

Query: 1055 YVGMIFESEDDSYEKYNEFARKVGFGIRKGNSYK-RPDGTVRSRVFVCFKEGFRQN---- 891
            Y GM FESE+ +   YN +AR+VGF  R   S + R DG +  R FVC KEGFR +    
Sbjct: 67   YEGMEFESEEAAKAFYNSYARRVGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRVDKEKP 126

Query: 890  --DHRAKNVREHKETRTGCKARMMIK-QNEDEWVASSITFEHNHLLLTPKKASMLRSHRS 720
              D R K  R   ETR GCKA +++K Q+   WV S    EHNH L+ P K   LRSHR 
Sbjct: 127  GRDGRVK--RPRAETRVGCKAMLVVKIQDSSRWVVSGFVKEHNHELVPPDKVHCLRSHRH 184

Query: 719  MKDVHKGEIQILNAVGIPPVDGFDYMVQQGGGHVNVGITQVDYKKILRRKRAEELKLGDA 540
            +    K  I  L   GI P      ++++ GG  NVG T+ D +  +R  R   L  GD 
Sbjct: 185  VSGAAKSLIDTLQGAGIGPSGIMSALIKEYGGISNVGFTERDCRNYMRSSRQRTLG-GDT 243

Query: 539  SALVNYFTRKKIENSCFFYDIMFDDENQVTNLFWADAMSIIDYNHFGNVVVFYTTYRTNK 360
              L++Y    + EN  F Y +  D++  ++N+FWAD  + ++Y +FG+ V F TTYR+N+
Sbjct: 244  QLLLDYLRNMQAENPAFVYAVQGDEDQCMSNIFWADPKARMNYTYFGDTVTFDTTYRSNR 303

Query: 359  YGRSFAPFVGVNHHKESVFLGGALLIDEMAKSFVWLFETWMKAMDGKKPRTIFTDQCPSM 180
            Y   FAPF GVNHH + V  G ALLI+E   SFVWLF+TW+ AM G+ P +I TD    +
Sbjct: 304  YRLPFAPFTGVNHHGQPVLFGCALLINESEASFVWLFKTWLAAMSGRPPVSITTDHDRVI 363

Query: 179  AKAIAQVFPVLEINRRLCLWHIFFNGAKHLSHVYK-VDGFTKTLKRCIYNSETVEEFES 6
              A+ QVFPV     R C WHIF    + LSHV      F   L +C+  +E++EEFES
Sbjct: 364  RLAVTQVFPV--TRHRFCKWHIFKECQEKLSHVLSGHPNFEAELHKCVNLTESIEEFES 420


Top