BLASTX nr result

ID: Coptis25_contig00024298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024298
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306147.1| SAUR family protein [Populus trichocarpa] gi...   195   7e-48
ref|XP_002270504.1| PREDICTED: auxin-induced protein 15A [Vitis ...   195   7e-48
ref|XP_002313002.1| SAUR family protein [Populus trichocarpa] gi...   193   3e-47
gb|AFT92005.1| SAUR family protein [Populus tomentosa] gi|407260...   190   2e-46
ref|NP_179718.1| SAUR-like auxin-responsive protein [Arabidopsis...   185   7e-45

>ref|XP_002306147.1| SAUR family protein [Populus trichocarpa]
           gi|222849111|gb|EEE86658.1| SAUR family protein [Populus
           trichocarpa]
          Length = 104

 Score =  195 bits (495), Expect = 7e-48
 Identities = 94/104 (90%), Positives = 100/104 (96%)
 Frame = +3

Query: 81  MAIRKSSKLPQTAVLKQILKRCSSLGKRQGYDEEGLPVDVPKGHFPVYVGEKRSRFIVPI 260
           MAIRKS KLPQTAVLKQILKRCSSLGK+ GYD++GLP+DVPKGHF VYVGE RSR+IVPI
Sbjct: 1   MAIRKSHKLPQTAVLKQILKRCSSLGKKHGYDDDGLPLDVPKGHFAVYVGENRSRYIVPI 60

Query: 261 SFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 392
           SFL+HPEFQSLLQRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR
Sbjct: 61  SFLSHPEFQSLLQRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 104


>ref|XP_002270504.1| PREDICTED: auxin-induced protein 15A [Vitis vinifera]
           gi|147856535|emb|CAN82489.1| hypothetical protein
           VITISV_036184 [Vitis vinifera]
          Length = 104

 Score =  195 bits (495), Expect = 7e-48
 Identities = 94/104 (90%), Positives = 100/104 (96%)
 Frame = +3

Query: 81  MAIRKSSKLPQTAVLKQILKRCSSLGKRQGYDEEGLPVDVPKGHFPVYVGEKRSRFIVPI 260
           MAIRKS+KLPQTAVLKQILKRCSSLGK+ GYDE+GLP+DVPKGHF VYVGE RSR+IVPI
Sbjct: 1   MAIRKSNKLPQTAVLKQILKRCSSLGKKNGYDEDGLPLDVPKGHFAVYVGENRSRYIVPI 60

Query: 261 SFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 392
           SFL+HPEFQ LLQRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR
Sbjct: 61  SFLSHPEFQCLLQRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 104


>ref|XP_002313002.1| SAUR family protein [Populus trichocarpa]
           gi|118484681|gb|ABK94211.1| unknown [Populus
           trichocarpa] gi|222849410|gb|EEE86957.1| SAUR family
           protein [Populus trichocarpa]
           gi|407260775|gb|AFT92006.1| SAUR family protein [Populus
           alba x Populus tremula var. glandulosa]
           gi|407260799|gb|AFT92018.1| SAUR family protein [Populus
           alba x Populus tremula var. glandulosa]
          Length = 104

 Score =  193 bits (490), Expect = 3e-47
 Identities = 93/104 (89%), Positives = 99/104 (95%)
 Frame = +3

Query: 81  MAIRKSSKLPQTAVLKQILKRCSSLGKRQGYDEEGLPVDVPKGHFPVYVGEKRSRFIVPI 260
           MAIRKS KLPQTAVLKQILKRCSSLGK+ GYD++GLP+DVPKGHF VYVGE RSR+IVPI
Sbjct: 1   MAIRKSQKLPQTAVLKQILKRCSSLGKKHGYDDDGLPLDVPKGHFAVYVGENRSRYIVPI 60

Query: 261 SFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 392
           SFL+HPEFQ LLQRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR
Sbjct: 61  SFLSHPEFQFLLQRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 104


>gb|AFT92005.1| SAUR family protein [Populus tomentosa] gi|407260797|gb|AFT92017.1|
           SAUR family protein [Populus tomentosa]
          Length = 104

 Score =  190 bits (483), Expect = 2e-46
 Identities = 91/104 (87%), Positives = 98/104 (94%)
 Frame = +3

Query: 81  MAIRKSSKLPQTAVLKQILKRCSSLGKRQGYDEEGLPVDVPKGHFPVYVGEKRSRFIVPI 260
           MAIRKS KLPQTAVLKQILKRCSSLGK+ GYD++GLP+DVPKGHF VYVGE RSR+IVPI
Sbjct: 1   MAIRKSQKLPQTAVLKQILKRCSSLGKKHGYDDDGLPLDVPKGHFAVYVGENRSRYIVPI 60

Query: 261 SFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 392
           SFL+HP+FQ LLQRAEEEFGFDHDMGLT PCEEVVFRSLTSMLR
Sbjct: 61  SFLSHPQFQFLLQRAEEEFGFDHDMGLTFPCEEVVFRSLTSMLR 104


>ref|NP_179718.1| SAUR-like auxin-responsive protein [Arabidopsis thaliana]
           gi|4582443|gb|AAD24828.1| putative auxin-regulated
           protein [Arabidopsis thaliana]
           gi|20197719|gb|AAM15223.1| putative auxin-regulated
           protein [Arabidopsis thaliana]
           gi|26451718|dbj|BAC42954.1| putative auxin-regulated
           protein [Arabidopsis thaliana]
           gi|28973279|gb|AAO63964.1| putative auxin-regulated
           protein [Arabidopsis thaliana]
           gi|330252047|gb|AEC07141.1| SAUR-like auxin-responsive
           protein [Arabidopsis thaliana]
          Length = 104

 Score =  185 bits (469), Expect = 7e-45
 Identities = 88/103 (85%), Positives = 99/103 (96%)
 Frame = +3

Query: 81  MAIRKSSKLPQTAVLKQILKRCSSLGKRQGYDEEGLPVDVPKGHFPVYVGEKRSRFIVPI 260
           MA+++SSKL QTA+LKQILKRCSSL K Q YDE+GLPVDVPKGHFPVYVGEKRSR+IVPI
Sbjct: 1   MAVKRSSKLTQTAMLKQILKRCSSLAKNQCYDEDGLPVDVPKGHFPVYVGEKRSRYIVPI 60

Query: 261 SFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCEEVVFRSLTSML 389
           SFLTHP+F+SLLQ+AEEEFGF+HDMGLTIPCEEVVFRSLTSM+
Sbjct: 61  SFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103


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