BLASTX nr result

ID: Coptis25_contig00024297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024297
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADJ67440.1| ethylene response factor 11 [Actinidia deliciosa]      152   2e-35
gb|ADE41101.1| AP2 domain class transcription factor [Malus x do...   152   2e-35
gb|ADE41097.1| AP2 domain class transcription factor [Malus x do...   151   5e-35
emb|CBI38608.3| unnamed protein product [Vitis vinifera]              148   4e-34
dbj|BAF75651.1| transcription factor DcERF1 [Daucus carota]           146   1e-33

>gb|ADJ67440.1| ethylene response factor 11 [Actinidia deliciosa]
          Length = 275

 Score =  152 bits (385), Expect = 2e-35
 Identities = 87/159 (54%), Positives = 108/159 (67%), Gaps = 11/159 (6%)
 Frame = -2

Query: 447 ENRHYRGVRRRPWGKYAAEIRDSNRQGSRLWLGTFETAIEAAKAYDCAAFNMRGSKAILN 268
           E RHYRGVRRRPWGK+AAEIR+ NR+G+R+WLGTF+TA+EAAKAYD AAF +RGSKAILN
Sbjct: 121 ERRHYRGVRRRPWGKFAAEIRNPNRRGARVWLGTFDTAVEAAKAYDRAAFKLRGSKAILN 180

Query: 267 FPHEI----ENQQPSDNSVCRKRRRRENFDAEEEKAVKQNRVAKKSIE----TTVSLSTT 112
           FPHEI    E+  P+D    R++RRRE+   E EK   +   A++  E    T V+  T 
Sbjct: 181 FPHEIGSSPESFPPADT---RRKRRREDESEEREKREVKREKAEEEEEAEGVTAVAPLTP 237

Query: 111 SGWTDIWESLDYNSNFDFDVPLLSPLS---SVGYPQLIV 4
           S WT +W+  D      FDVP LSPLS   S+G  +L V
Sbjct: 238 SNWTAVWDWTDMKG--IFDVPPLSPLSPHPSMGLSRLTV 274


>gb|ADE41101.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 332

 Score =  152 bits (385), Expect = 2e-35
 Identities = 85/156 (54%), Positives = 107/156 (68%), Gaps = 4/156 (2%)
 Frame = -2

Query: 459 SNVEENRHYRGVRRRPWGKYAAEIRDSNRQGSRLWLGTFETAIEAAKAYDCAAFNMRGSK 280
           SN E+ +HYRGVR+RPWGKYAAEIRD NR+GSR+WLGTF+TAIEAA+AYD AAF +RG+K
Sbjct: 184 SNEEKKKHYRGVRQRPWGKYAAEIRDPNRRGSRVWLGTFDTAIEAARAYDRAAFKLRGAK 243

Query: 279 AILNFPHEIENQQPSDNSVCRKRRRRENFD-AEEEKAVKQNRVAKKSIETTVSLSTTSGW 103
           AILNFP E    +P   SV RKRRR E  D A+E   VK+ ++ +  +       T S W
Sbjct: 244 AILNFPLEAGKAEPV-VSVERKRRREERRDEAKEVVVVKKEKLTETPL-------TPSSW 295

Query: 102 TDIWESLDYNSNFDFDVPLLSPLS---SVGYPQLIV 4
              WES   +    F +P LSPLS   ++GYPQ++V
Sbjct: 296 MSFWESEKEDVKGVFSIPPLSPLSPHPAMGYPQVMV 331


>gb|ADE41097.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 314

 Score =  151 bits (382), Expect = 5e-35
 Identities = 83/168 (49%), Positives = 101/168 (60%), Gaps = 22/168 (13%)
 Frame = -2

Query: 441 RHYRGVRRRPWGKYAAEIRDSNRQGSRLWLGTFETAIEAAKAYDCAAFNMRGSKAILNFP 262
           RHYRGVRRRPWGKYAAEIRD NR+GSR+WLGTF+TA+EAAKAYD AAFN+RGSKAILNFP
Sbjct: 146 RHYRGVRRRPWGKYAAEIRDPNRRGSRVWLGTFDTAVEAAKAYDLAAFNLRGSKAILNFP 205

Query: 261 HEI--ENQQPSDNSVCRKRRRRENFDAE----------------EEKAVKQNRVAKKSIE 136
            E     + P+D+ +   R+RR     E                EE   +    A++ + 
Sbjct: 206 LEAGKSAELPADHPLLASRKRRREHSTEIHENSGEMIRNKEIKKEEDVQEMKSSAQERVS 265

Query: 135 TTVSLSTTSGWTDIWESLDYNSNFDFDVPLLSPLSS----VGYPQLIV 4
           T V   T S W  +W+    N    F VP LSPLS     +GYP L+V
Sbjct: 266 TAVCPLTPSSWAAVWDMSKENEQGIFSVPPLSPLSPHPNFMGYPPLVV 313


>emb|CBI38608.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score =  148 bits (374), Expect = 4e-34
 Identities = 85/155 (54%), Positives = 99/155 (63%), Gaps = 8/155 (5%)
 Frame = -2

Query: 447 ENRHYRGVRRRPWGKYAAEIRDSNRQGSRLWLGTFETAIEAAKAYDCAAFNMRGSKAILN 268
           E RHYRGVRRRPWGK+AAEIRDSNR+GSR+WLGTFETAIEAA+AYD AAF MRGSKAILN
Sbjct: 63  EIRHYRGVRRRPWGKFAAEIRDSNRRGSRVWLGTFETAIEAARAYDRAAFKMRGSKAILN 122

Query: 267 FPHEIENQQPSDNSVCRKRRRRENFDAE-----EEKAVKQNRVAKKSIETTVSLSTTSGW 103
           FP E  N   SD      R+R  +F  E     E K +KQ   A  ++     L T S W
Sbjct: 123 FPLEAGNWSGSDPPATSGRKRVRDFGTEVREQVEIKVLKQEEAAAANVLQAGPL-TPSSW 181

Query: 102 TDIWESLDYNSNFDFDVPLLSPLSS---VGYPQLI 7
             +WE  D      F +P L+PLS    VGY +L+
Sbjct: 182 RTVWEERDMEGT--FHLPPLTPLSPHPWVGYSRLV 214


>dbj|BAF75651.1| transcription factor DcERF1 [Daucus carota]
          Length = 296

 Score =  146 bits (369), Expect = 1e-33
 Identities = 78/145 (53%), Positives = 101/145 (69%), Gaps = 6/145 (4%)
 Frame = -2

Query: 447 ENRHYRGVRRRPWGKYAAEIRDSNRQGSRLWLGTFETAIEAAKAYDCAAFNMRGSKAILN 268
           E RHYRGVR+RPWGK+AAEIRD NR+GSR+WLGTF+TAI+AAKAYD AAF +RGSKAILN
Sbjct: 133 EKRHYRGVRQRPWGKFAAEIRDPNRKGSRVWLGTFDTAIDAAKAYDRAAFRLRGSKAILN 192

Query: 267 FPHEIENQQPSDNSVCR--KRRRRENFDAEEEKAVKQNRVAKKSIETTVSLS----TTSG 106
           FPHEI     +   V    ++R +EN  AE+E+ +K+ +V+  S    V+      T S 
Sbjct: 193 FPHEIAQSPETSPPVSNIGRKRVKEN-KAEQEREIKREKVSADSNCEVVAAGACPLTPSM 251

Query: 105 WTDIWESLDYNSNFDFDVPLLSPLS 31
           WT++WE  +      F++P LSPLS
Sbjct: 252 WTEVWEGGEEKGGI-FEIPPLSPLS 275


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