BLASTX nr result

ID: Coptis25_contig00024286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024286
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281240.2| PREDICTED: transcription regulatory protein ...   281   5e-74
emb|CBI26213.3| unnamed protein product [Vitis vinifera]              281   5e-74
ref|XP_002311608.1| chromatin remodeling complex subunit [Populu...   280   9e-74
ref|XP_003535660.1| PREDICTED: transcription regulatory protein ...   278   3e-73
ref|XP_003610678.1| Chromatin remodeling complex subunit [Medica...   276   1e-72

>ref|XP_002281240.2| PREDICTED: transcription regulatory protein SNF2-like [Vitis
            vinifera]
          Length = 1114

 Score =  281 bits (718), Expect = 5e-74
 Identities = 135/157 (85%), Positives = 146/157 (92%), Gaps = 1/157 (0%)
 Frame = +2

Query: 2    NSLQELWSLLNFLLPSIFNSVENFEEWFNAPFADRGDVSLTDEEQLLVIRRLHQVIRPFI 181
            NSLQELWSLLNFLLPSIFNSV NFEEWFNAPFADR DVSLTDEE+LL+I RLH VIRPFI
Sbjct: 574  NSLQELWSLLNFLLPSIFNSVTNFEEWFNAPFADRSDVSLTDEEELLIIHRLHHVIRPFI 633

Query: 182  LRRKKDEVEKFLPGKKQVILKCDLSAWQKVYYHQVTEEGRVGMDSKSGKSRGLQNLTMQL 361
            LRRKKDEVEK+LPGK QVILKCD+SAWQK YYHQVT+ GRVG+D+ SGKS+ LQNL+MQL
Sbjct: 634  LRRKKDEVEKYLPGKTQVILKCDMSAWQKAYYHQVTDLGRVGLDTGSGKSKSLQNLSMQL 693

Query: 362  RKCCNHPYLFLRDYNIWQ-KEEVVRASGKFELLDRLL 469
            RKCCNHPYLF+ DYNIWQ KEE+VRASGKFELLDRLL
Sbjct: 694  RKCCNHPYLFVGDYNIWQKKEEMVRASGKFELLDRLL 730


>emb|CBI26213.3| unnamed protein product [Vitis vinifera]
          Length = 1110

 Score =  281 bits (718), Expect = 5e-74
 Identities = 135/157 (85%), Positives = 146/157 (92%), Gaps = 1/157 (0%)
 Frame = +2

Query: 2    NSLQELWSLLNFLLPSIFNSVENFEEWFNAPFADRGDVSLTDEEQLLVIRRLHQVIRPFI 181
            NSLQELWSLLNFLLPSIFNSV NFEEWFNAPFADR DVSLTDEE+LL+I RLH VIRPFI
Sbjct: 563  NSLQELWSLLNFLLPSIFNSVTNFEEWFNAPFADRSDVSLTDEEELLIIHRLHHVIRPFI 622

Query: 182  LRRKKDEVEKFLPGKKQVILKCDLSAWQKVYYHQVTEEGRVGMDSKSGKSRGLQNLTMQL 361
            LRRKKDEVEK+LPGK QVILKCD+SAWQK YYHQVT+ GRVG+D+ SGKS+ LQNL+MQL
Sbjct: 623  LRRKKDEVEKYLPGKTQVILKCDMSAWQKAYYHQVTDLGRVGLDTGSGKSKSLQNLSMQL 682

Query: 362  RKCCNHPYLFLRDYNIWQ-KEEVVRASGKFELLDRLL 469
            RKCCNHPYLF+ DYNIWQ KEE+VRASGKFELLDRLL
Sbjct: 683  RKCCNHPYLFVGDYNIWQKKEEMVRASGKFELLDRLL 719


>ref|XP_002311608.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222851428|gb|EEE88975.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1131

 Score =  280 bits (716), Expect = 9e-74
 Identities = 132/156 (84%), Positives = 145/156 (92%)
 Frame = +2

Query: 2    NSLQELWSLLNFLLPSIFNSVENFEEWFNAPFADRGDVSLTDEEQLLVIRRLHQVIRPFI 181
            NSLQELWSLLNFLLP IFNS + FEEWFNAPFADRG+VSLTDEEQLL+IRRLH VIRPFI
Sbjct: 581  NSLQELWSLLNFLLPHIFNSEDKFEEWFNAPFADRGEVSLTDEEQLLIIRRLHNVIRPFI 640

Query: 182  LRRKKDEVEKFLPGKKQVILKCDLSAWQKVYYHQVTEEGRVGMDSKSGKSRGLQNLTMQL 361
            LRRKKDEVEK+LPGK QVILKCDLSAWQKVYY QVTE GRVG+ + SGKS+ LQNLTMQL
Sbjct: 641  LRRKKDEVEKYLPGKSQVILKCDLSAWQKVYYQQVTEMGRVGLQNGSGKSKSLQNLTMQL 700

Query: 362  RKCCNHPYLFLRDYNIWQKEEVVRASGKFELLDRLL 469
            RKCCNHPYLF+ DYN+W+K+E++RASGKFELLDRLL
Sbjct: 701  RKCCNHPYLFVGDYNMWRKDEIMRASGKFELLDRLL 736


>ref|XP_003535660.1| PREDICTED: transcription regulatory protein SNF2-like [Glycine max]
          Length = 1072

 Score =  278 bits (711), Expect = 3e-73
 Identities = 134/157 (85%), Positives = 149/157 (94%), Gaps = 1/157 (0%)
 Frame = +2

Query: 2    NSLQELWSLLNFLLPSIFNSVENFEEWFNAPFADRGDVSLTDEEQLLVIRRLHQVIRPFI 181
            NSLQELWSLLNFLLP+IFNSV+NFE+WFNAPFADR DVSLTDEEQLL+IRRLHQVIRPFI
Sbjct: 533  NSLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFI 592

Query: 182  LRRKKDEVEKFLPGKKQVILKCDLSAWQKVYYHQVTEEGRVGMDSKSGKSRGLQNLTMQL 361
            LRRKKDEVEKFLPGK QVILKCD+SAWQKVYY QVT+ GRVG+D+ SGKS+ LQNLTMQL
Sbjct: 593  LRRKKDEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDNGSGKSKSLQNLTMQL 652

Query: 362  RKCCNHPYLFLRDYNIW-QKEEVVRASGKFELLDRLL 469
            RKCCNHPYLF+ DY+++ +KEE+VRASGKFELLDRLL
Sbjct: 653  RKCCNHPYLFVGDYDMYRRKEEIVRASGKFELLDRLL 689


>ref|XP_003610678.1| Chromatin remodeling complex subunit [Medicago truncatula]
           gi|355512013|gb|AES93636.1| Chromatin remodeling complex
           subunit [Medicago truncatula]
          Length = 1063

 Score =  276 bits (707), Expect = 1e-72
 Identities = 132/156 (84%), Positives = 147/156 (94%)
 Frame = +2

Query: 2   NSLQELWSLLNFLLPSIFNSVENFEEWFNAPFADRGDVSLTDEEQLLVIRRLHQVIRPFI 181
           NSLQELWSLLNFLLP+IFNSV+NFE+WFNAPFADR DVSLTDEEQLL+IRRLHQVIRPFI
Sbjct: 526 NSLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFI 585

Query: 182 LRRKKDEVEKFLPGKKQVILKCDLSAWQKVYYHQVTEEGRVGMDSKSGKSRGLQNLTMQL 361
           LRRKK EVEKFLPGK QVILKCD+SAWQKVYY QVT+ GRVG+D  SGKS+ LQNLTMQL
Sbjct: 586 LRRKKAEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDYGSGKSKSLQNLTMQL 645

Query: 362 RKCCNHPYLFLRDYNIWQKEEVVRASGKFELLDRLL 469
           RKCCNHPYLF+ +Y+I+++EE+VRASGKFELLDRLL
Sbjct: 646 RKCCNHPYLFVGNYDIYRREEIVRASGKFELLDRLL 681


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