BLASTX nr result

ID: Coptis25_contig00024284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024284
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161479.1| PREDICTED: meiotic recombination protein SPO...   232   5e-59
ref|XP_004143970.1| PREDICTED: meiotic recombination protein SPO...   232   5e-59
ref|XP_003611060.1| Meiotic recombination protein SPO11-2 [Medic...   225   6e-57
emb|CBI34392.3| unnamed protein product [Vitis vinifera]              223   4e-56
ref|XP_002886372.1| hypothetical protein ARALYDRAFT_474957 [Arab...   221   9e-56

>ref|XP_004161479.1| PREDICTED: meiotic recombination protein SPO11-2-like [Cucumis
           sativus]
          Length = 346

 Score =  232 bits (592), Expect = 5e-59
 Identities = 122/229 (53%), Positives = 163/229 (71%), Gaps = 1/229 (0%)
 Frame = -2

Query: 684 SNLSKSSL-FHSDQQLSYAEILTPSQVKARIEITVLNFLKTLTXXXXXXXXXXXXXNRTS 508
           + L +SS+ F SDQ+L YA+ILTP +V ARI++ VLNFL+ L               R+S
Sbjct: 4   AGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRILNSSSPAISNLPLIDRRSS 63

Query: 507 TNTHLTRGLFSNNNXXXXXXXXXXXXXXXXXXXXXXXXIRVWKVMEMCYQILLQNKMVTQ 328
            N+ +++G+ ++++                         RVWK+MEMC QIL+Q+K VTQ
Sbjct: 64  -NSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFV--RVWKLMEMCSQILIQDKKVTQ 120

Query: 327 RELYYKLICTSPEYFHSQLQVNKSIQDVVALLKCTRQSLGIIASSRGLIAGRITLQEDDS 148
           REL+YKL+C SP YF +QL VN++IQDVVALL+C+R SLGI+ASSRGL+AGR+ LQE + 
Sbjct: 121 RELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQ 180

Query: 147 NIVDCSVCGSSGYPITGDLNLLNTLIIKSDARYIVVIEKHAIFQRLAED 1
            +VDC+ CGSSGYPI+GDL+LL TL +K+DARYI+VIEKHAIFQRLA+D
Sbjct: 181 EVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADD 229


>ref|XP_004143970.1| PREDICTED: meiotic recombination protein SPO11-2-like [Cucumis
           sativus]
          Length = 384

 Score =  232 bits (592), Expect = 5e-59
 Identities = 122/229 (53%), Positives = 163/229 (71%), Gaps = 1/229 (0%)
 Frame = -2

Query: 684 SNLSKSSL-FHSDQQLSYAEILTPSQVKARIEITVLNFLKTLTXXXXXXXXXXXXXNRTS 508
           + L +SS+ F SDQ+L YA+ILTP +V ARI++ VLNFL+ L               R+S
Sbjct: 4   AGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRILNSSSPAISNLPLIDRRSS 63

Query: 507 TNTHLTRGLFSNNNXXXXXXXXXXXXXXXXXXXXXXXXIRVWKVMEMCYQILLQNKMVTQ 328
            N+ +++G+ ++++                         RVWK+MEMC QIL+Q+K VTQ
Sbjct: 64  -NSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFV--RVWKLMEMCSQILIQDKKVTQ 120

Query: 327 RELYYKLICTSPEYFHSQLQVNKSIQDVVALLKCTRQSLGIIASSRGLIAGRITLQEDDS 148
           REL+YKL+C SP YF +QL VN++IQDVVALL+C+R SLGI+ASSRGL+AGR+ LQE + 
Sbjct: 121 RELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQ 180

Query: 147 NIVDCSVCGSSGYPITGDLNLLNTLIIKSDARYIVVIEKHAIFQRLAED 1
            +VDC+ CGSSGYPI+GDL+LL TL +K+DARYI+VIEKHAIFQRLA+D
Sbjct: 181 EVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADD 229


>ref|XP_003611060.1| Meiotic recombination protein SPO11-2 [Medicago truncatula]
           gi|355512395|gb|AES94018.1| Meiotic recombination
           protein SPO11-2 [Medicago truncatula]
          Length = 390

 Score =  225 bits (574), Expect = 6e-57
 Identities = 124/230 (53%), Positives = 156/230 (67%), Gaps = 1/230 (0%)
 Frame = -2

Query: 687 MSNLSKSSL-FHSDQQLSYAEILTPSQVKARIEITVLNFLKTLTXXXXXXXXXXXXXNRT 511
           M +L  SSL F +DQ+L YA+I+ PSQV+ARIE++VL+FLK L               R 
Sbjct: 1   MEDLRNSSLKFFTDQELCYADIVPPSQVRARIEVSVLSFLKILNASNPAISDLPLIQ-RK 59

Query: 510 STNTHLTRGLFSNNNXXXXXXXXXXXXXXXXXXXXXXXXIRVWKVMEMCYQILLQNKMVT 331
           S+N+ +  GL +  +                         RVWKVMEMCYQILLQ K VT
Sbjct: 60  SSNSRVNHGLLTELSYVFLSNSVSTRSLMRPNAAKAFV--RVWKVMEMCYQILLQEKRVT 117

Query: 330 QRELYYKLICTSPEYFHSQLQVNKSIQDVVALLKCTRQSLGIIASSRGLIAGRITLQEDD 151
           QREL+YKL+C S   F SQ  VN++IQD+VALL+C+R SLGI+ASSRG+IAGR+ LQE  
Sbjct: 118 QRELFYKLLCHSQHLFPSQKDVNRTIQDLVALLRCSRYSLGIMASSRGIIAGRLILQEPG 177

Query: 150 SNIVDCSVCGSSGYPITGDLNLLNTLIIKSDARYIVVIEKHAIFQRLAED 1
              VDCSVCGSSG+ I+GDLNLL+ LI+ +DARYI+++EKHAIFQRLAED
Sbjct: 178 KEAVDCSVCGSSGHAISGDLNLLDKLILNADARYIIIVEKHAIFQRLAED 227


>emb|CBI34392.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score =  223 bits (567), Expect = 4e-56
 Identities = 119/229 (51%), Positives = 154/229 (67%)
 Frame = -2

Query: 687 MSNLSKSSLFHSDQQLSYAEILTPSQVKARIEITVLNFLKTLTXXXXXXXXXXXXXNRTS 508
           M++L +SS F SDQ L  A+I+  S+ +ARIE+ VLNFLK L               R S
Sbjct: 1   MADLCRSSTFFSDQNLCNADIIGSSEARARIEVAVLNFLKILNSPSPAISDLPLISRRWS 60

Query: 507 TNTHLTRGLFSNNNXXXXXXXXXXXXXXXXXXXXXXXXIRVWKVMEMCYQILLQNKMVTQ 328
            N+ + RGL +  +                         RVWKV+EMC+QIL+Q K VTQ
Sbjct: 61  -NSRVNRGLLTEVSCIFLSHSFCTRSLMRPNAAKAFV--RVWKVVEMCFQILVQEKRVTQ 117

Query: 327 RELYYKLICTSPEYFHSQLQVNKSIQDVVALLKCTRQSLGIIASSRGLIAGRITLQEDDS 148
           REL+YKL+C+SP+YF  QLQVN++IQDVVALL+C+R SLGI+ASSRG + GR+ LQ   S
Sbjct: 118 RELFYKLLCSSPQYFTCQLQVNRTIQDVVALLRCSRYSLGIMASSRGAVTGRLLLQAFIS 177

Query: 147 NIVDCSVCGSSGYPITGDLNLLNTLIIKSDARYIVVIEKHAIFQRLAED 1
             VDCS CGSSG+ I+GD+NLL  +++K+DARYI+V+EKHAIFQRLAED
Sbjct: 178 ETVDCSACGSSGHAISGDMNLLERMVMKTDARYIIVVEKHAIFQRLAED 226


>ref|XP_002886372.1| hypothetical protein ARALYDRAFT_474957 [Arabidopsis lyrata subsp.
           lyrata] gi|297332213|gb|EFH62631.1| hypothetical protein
           ARALYDRAFT_474957 [Arabidopsis lyrata subsp. lyrata]
          Length = 383

 Score =  221 bits (564), Expect = 9e-56
 Identities = 115/223 (51%), Positives = 151/223 (67%)
 Frame = -2

Query: 669 SSLFHSDQQLSYAEILTPSQVKARIEITVLNFLKTLTXXXXXXXXXXXXXNRTSTNTHLT 490
           S  F SDQ LSYA+IL P + +ARIE++VLN L+ L               + S N+ + 
Sbjct: 9   SMKFFSDQHLSYADILRPHEARARIEVSVLNLLRILNSPDPAISDLSLINRKRS-NSCIN 67

Query: 489 RGLFSNNNXXXXXXXXXXXXXXXXXXXXXXXXIRVWKVMEMCYQILLQNKMVTQRELYYK 310
           +G+ ++ +                         RVWKVME+C+QILLQ K VTQREL+YK
Sbjct: 68  QGILTDVSYIFLSTSFTKSSLTNAKTAKTFV--RVWKVMEICFQILLQEKRVTQRELFYK 125

Query: 309 LICTSPEYFHSQLQVNKSIQDVVALLKCTRQSLGIIASSRGLIAGRITLQEDDSNIVDCS 130
           L+C SP+YF SQ++VN+++QDVVALL+C+R SLGI+ASSRGL+AGR+ LQE     VDCS
Sbjct: 126 LLCDSPDYFSSQIEVNRTVQDVVALLRCSRYSLGIMASSRGLVAGRLFLQEPGKEAVDCS 185

Query: 129 VCGSSGYPITGDLNLLNTLIIKSDARYIVVIEKHAIFQRLAED 1
            CGSSG+ ITGDLNLL+  I++SDARYI+++EKHAIF RL ED
Sbjct: 186 ACGSSGFTITGDLNLLDNTIMRSDARYIIIVEKHAIFHRLVED 228


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